Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g068610.2.1
CDS Infomation

Transcriptional adapter 1 (AHRD V3.3 *** A0A0B0NYM8_GOSAR)
Sequence

ATGCGGAACAATGTTATGGAGCAATGGAAGAAGAAGCTTTTCAGGGAGCTAAATAAGAAT
AAATTTGAAGTTGAAGTGGGTAACTTCAAGTTTGTGGAAAGGTTGAATTTTTGGCTTGTT
TTTGGTGGAATATATGTATTGACGGAGATGCAACCACCACACCAGCATTCCCGGATTAAT
CTTTCTGAATTGAAAGCTCAGATAGTGAAGAAACTTGGACCAGAGGGTTCAAAGCAGTAC
TTTCATTACTTAAGTAGGCTATTGAGCTTGAAGATAAGCAAGGCCGAGTTCAATAAACTT
TGTTTAAGGATCTTGGGGAGAGAAAACATTCCGTTGCATAATCAGTTCATTCATTCTATT
CTGAGAAATGCCTGTAGTGCAAAAGTTCCTCCGCCAATTAATGAAGGGGGTATTGTGAAG
CCTGTTGTAGCGGTTGGCAGTAAACAGCCCTTAGATGATGCTTATGACCAAAATGGATTT
CATGTTTCCTCAAACCAGGCTTCAGGTCAACCGGGTTTGTCCAATGGTGCCGTGCTGCCA
TTATCTCCTCGGAAGGCCAGGACAGGATATCGTGATCGTAGGGCTGGGGATCGCCGTAGT
GTGCTTGGATCAAATGGGAAGAATAGTTTTACTTTTCAACAAGCTACTATGATGGAATCG
AGTGATTTCGAAATTATTAAGGAAAATGGGGATTTGAATCCACCTAATGTCAAGGGAGCA
GTGCATCAATATCAAGGAATCATGCAGCAAACAGATGATGATAGACAGGGATTCAATCAA
GAAACTGCCAAATTTTCTGTTATGAAGAGATCACTGCAAAATTCAGTATCTTTACAGAAG
AAAACAGACAAATCTAGAGATGATGGAAAAGAGATGCATGCTAGGAGTCGACTCCAAGCT
CCTCTTGGGGTTCCATTTTGCCCCGTTAGTGTAGGTGGAGCACGTAGATCAGTATCTTTA
GCAGCAAGTAGTAGATGTGTTAGCTCTTCTAGTTTTGGTGCTTTGTTGGACAGTGTAACT
CTGAGGGAACGCATGGAGCAGATTTCTGCAGAACAGGGCCTTGATGGGGTGACCACGGAT
TGTGCCAATCTGTTGAACAATGGTTTGGATTCTTACTTAAAAGGTTTAATCAAATCTTGT
CTCCAATTTGTGGGAGCAAGGTCAGGGCATGAGCCTACAACAAACAACACCAAGAAGCAG
CAGACCTATATGAAGCTAGTTAATGGTCTCAGACCAGGTCATCATTTACAGATGAATGGT
GGTAGATTGTCAGAAGCTGTGAACGAACGTGCTCCAGGCAACCTGGTATCATTGCAAGAT
TTTAGGGTTGCCATGGAACTGAACCCCCGGCAACTTGGTGAAGACTGGCCGCTGCTGCTG
GAGAAACTAACACATGCAGTTGAGGAATAA

Peptide Sequence

PEP ID

Solyc06g068610.2.1
PEP Infomation

Transcriptional adapter 1 (AHRD V3.3 *** A0A0B0NYM8_GOSAR)
Sequence

MRNNVMEQWKKKLFRELNKNKFEVEVGNFKFVERLNFWLVFGGIYVLTEMQPPHQHSRIN
LSELKAQIVKKLGPEGSKQYFHYLSRLLSLKISKAEFNKLCLRILGRENIPLHNQFIHSI
LRNACSAKVPPPINEGGIVKPVVAVGSKQPLDDAYDQNGFHVSSNQASGQPGLSNGAVLP
LSPRKARTGYRDRRAGDRRSVLGSNGKNSFTFQQATMMESSDFEIIKENGDLNPPNVKGA
VHQYQGIMQQTDDDRQGFNQETAKFSVMKRSLQNSVSLQKKTDKSRDDGKEMHARSRLQA
PLGVPFCPVSVGGARRSVSLAASSRCVSSSSFGALLDSVTLRERMEQISAEQGLDGVTTD
CANLLNNGLDSYLKGLIKSCLQFVGARSGHEPTTNNTKKQQTYMKLVNGLRPGHHLQMNG
GRLSEAVNERAPGNLVSLQDFRVAMELNPRQLGEDWPLLLEKLTHAVEE*

Transcript Sequence

Transcript ID

Solyc06g068610.2.1
Transcript Infomation

Transcriptional adapter 1 (AHRD V3.3 *** A0A0B0NYM8_GOSAR)
Sequence

ATGCGGAACAATGTTATGGAGCAATGGAAGAAGAAGCTTTTCAGGGAGCTAAATAAGAAT
AAATTTGAAGTTGAAGTGGGTAACTTCAAGTTTGTGGAAAGGTTGAATTTTTGGCTTGTT
TTTGGTGGAATATATGTATTGACGGAGATGCAACCACCACACCAGCATTCCCGGATTAAT
CTTTCTGAATTGAAAGCTCAGATAGTGAAGAAACTTGGACCAGAGGGTTCAAAGCAGTAC
TTTCATTACTTAAGTAGGCTATTGAGCTTGAAGATAAGCAAGGCCGAGTTCAATAAACTT
TGTTTAAGGATCTTGGGGAGAGAAAACATTCCGTTGCATAATCAGTTCATTCATTCTATT
CTGAGAAATGCCTGTAGTGCAAAAGTTCCTCCGCCAATTAATGAAGGGGGTATTGTGAAG
CCTGTTGTAGCGGTTGGCAGTAAACAGCCCTTAGATGATGCTTATGACCAAAATGGATTT
CATGTTTCCTCAAACCAGGCTTCAGGTCAACCGGGTTTGTCCAATGGTGCCGTGCTGCCA
TTATCTCCTCGGAAGGCCAGGACAGGATATCGTGATCGTAGGGCTGGGGATCGCCGTAGT
GTGCTTGGATCAAATGGGAAGAATAGTTTTACTTTTCAACAAGCTACTATGATGGAATCG
AGTGATTTCGAAATTATTAAGGAAAATGGGGATTTGAATCCACCTAATGTCAAGGGAGCA
GTGCATCAATATCAAGGAATCATGCAGCAAACAGATGATGATAGACAGGGATTCAATCAA
GAAACTGCCAAATTTTCTGTTATGAAGAGATCACTGCAAAATTCAGTATCTTTACAGAAG
AAAACAGACAAATCTAGAGATGATGGAAAAGAGATGCATGCTAGGAGTCGACTCCAAGCT
CCTCTTGGGGTTCCATTTTGCCCCGTTAGTGTAGGTGGAGCACGTAGATCAGTATCTTTA
GCAGCAAGTAGTAGATGTGTTAGCTCTTCTAGTTTTGGTGCTTTGTTGGACAGTGTAACT
CTGAGGGAACGCATGGAGCAGATTTCTGCAGAACAGGGCCTTGATGGGGTGACCACGGAT
TGTGCCAATCTGTTGAACAATGGTTTGGATTCTTACTTAAAAGGTTTAATCAAATCTTGT
CTCCAATTTGTGGGAGCAAGGTCAGGGCATGAGCCTACAACAAACAACACCAAGAAGCAG
CAGACCTATATGAAGCTAGTTAATGGTCTCAGACCAGGTCATCATTTACAGATGAATGGT
GGTAGATTGTCAGAAGCTGTGAACGAACGTGCTCCAGGCAACCTGGTATCATTGCAAGAT
TTTAGGGTTGCCATGGAACTGAACCCCCGGCAACTTGGTGAAGACTGGCCGCTGCTGCTG
GAGAAACTAACACATGCAGTTGAGGAATAA