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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g068550.3.1
CDS Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A061GAK7_THECC)
Sequence

ATGTCTCCTTGGCCATATTTAGTTTTTCTTCTTCTTTTCATTTTGCTCACTTCAAGTAAT
GCAAACAATGAACAAAGGCTTCACCTCAAAACACTTCAAAGAACACATCAAAGCAATAGC
CCAAGTTGTTATTCTCAAAAATCAAAAAGTGAAAATGGAGCAACAGTATTGGAAATGCAG
CACAAAGATTACTGCTCTGGATCAGTTACCAACATGAACAGAAATCATCAGAAACAACTG
ATAATTGATGATGATATTCGAGTTCGGTCAATACAAGACAGTATCAAGAACATCATATCT
GGAAAAATTGAAACTTCATCACAAAACAATATTCCTATTTCTTCTGGTGTCAAACTGCAT
AGTCTAAACTACATTGTCACAGTAACATTAGGTGGTCGAAACACGACAGTGATTGTGGAC
ACAGGAAGTGATCTCACATGGATTCAGTGTCAACCTTGTAGACTATGTTATAATCAACCA
GAACCTCTGTTTAACCCCTCTGTTTCTCCTACTTATCGCAAAGTTATATGCAACTCGTCG
GTTTGTCAAACACTTCAGTCTGCAACTGGAAATTCAGGGTCATGTGGGAATGATTTACAA
GATTGTAGTTATGTTGTCAACTATGGTGATGGATCCTACACTCGAGGCGAACTTGGTCAA
GATCATTTGGTTCTTGGAAGCACATCTGTTGAGAATTTTGTCTTTGGTTGTGGAAGAAAT
AACAAAGGTCTATTTGGTTTAGCCTCAGGGATTATGGGACTTGGAAGAAGTGATCTTTCT
TTGATATCTCAAACATTTGAGACTTTTGGTGGTGTTTTCTCCTACTGTTTGCCTTCAGCT
GAAGCTAAGTCCTCTGGCTCATTAGTATTAGGAGGTGACAGTAACACTACAATTTTCAAG
AACTCTACACCTATTTCCTACACTAGAATGTTAGCAAATCCACAGCTTGTTACCTTCTAT
TTTCTCAATCTAACCGGGGTTACTATCGGTGGGGTGGCTATTCAAGATTCAGCTTTTGGG
AAAACTGGGATGATCATTGATTCTGGTACAGTTATCACAAGGCTCCCACCAACAATGTAC
AAAGCTGTTAAAGCAGAGTTCTCGAAACAATTTTCAGGGTACCCTTTTAAACAAGGAGTT
TCAATTCTTGATACTTGTTTTGATCTTTCTGCATATGAAGAAGTGAATATTCCCACTGTT
AAAATGCAGTTTGAAGGTGGTGCTGAGATGGAAGTTGATGTTACTGGGGTTCTTTTTATT
GTAAAAAGTGATGCATCACAAGTCTGTTTGGCTCTAGCAAGCCTCCAATATGATGATGAG
ATTGGAATTATTGGAAATTATCAGCAGAAGAATACTAGGGTTATATATGATATAAAACAG
TCACAAGTTGGATTTGCAAAAGAGACATGTAGTTTCTGA

Peptide Sequence

PEP ID

Solyc06g068550.3.1
PEP Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A061GAK7_THECC)
Sequence

MSPWPYLVFLLLFILLTSSNANNEQRLHLKTLQRTHQSNSPSCYSQKSKSENGATVLEMQ
HKDYCSGSVTNMNRNHQKQLIIDDDIRVRSIQDSIKNIISGKIETSSQNNIPISSGVKLH
SLNYIVTVTLGGRNTTVIVDTGSDLTWIQCQPCRLCYNQPEPLFNPSVSPTYRKVICNSS
VCQTLQSATGNSGSCGNDLQDCSYVVNYGDGSYTRGELGQDHLVLGSTSVENFVFGCGRN
NKGLFGLASGIMGLGRSDLSLISQTFETFGGVFSYCLPSAEAKSSGSLVLGGDSNTTIFK
NSTPISYTRMLANPQLVTFYFLNLTGVTIGGVAIQDSAFGKTGMIIDSGTVITRLPPTMY
KAVKAEFSKQFSGYPFKQGVSILDTCFDLSAYEEVNIPTVKMQFEGGAEMEVDVTGVLFI
VKSDASQVCLALASLQYDDEIGIIGNYQQKNTRVIYDIKQSQVGFAKETCSF*

Transcript Sequence

Transcript ID

Solyc06g068550.3.1
Transcript Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** A0A061GAK7_THECC)
Sequence

CAACTCATAAGAATCTCATCCACACCCTATACTCTCTCCCTCCATTCTCTCTTCTCATTC
TTCCCATCTTCTTTTATTTTCCCTTCATTCCTAAAATACCTTCAAATTCCATCTTTAAAA
AAGTTGCAAACTTTAAAAAAACAATGTCTCCTTGGCCATATTTAGTTTTTCTTCTTCTTT
TCATTTTGCTCACTTCAAGTAATGCAAACAATGAACAAAGGCTTCACCTCAAAACACTTC
AAAGAACACATCAAAGCAATAGCCCAAGTTGTTATTCTCAAAAATCAAAAAGTGAAAATG
GAGCAACAGTATTGGAAATGCAGCACAAAGATTACTGCTCTGGATCAGTTACCAACATGA
ACAGAAATCATCAGAAACAACTGATAATTGATGATGATATTCGAGTTCGGTCAATACAAG
ACAGTATCAAGAACATCATATCTGGAAAAATTGAAACTTCATCACAAAACAATATTCCTA
TTTCTTCTGGTGTCAAACTGCATAGTCTAAACTACATTGTCACAGTAACATTAGGTGGTC
GAAACACGACAGTGATTGTGGACACAGGAAGTGATCTCACATGGATTCAGTGTCAACCTT
GTAGACTATGTTATAATCAACCAGAACCTCTGTTTAACCCCTCTGTTTCTCCTACTTATC
GCAAAGTTATATGCAACTCGTCGGTTTGTCAAACACTTCAGTCTGCAACTGGAAATTCAG
GGTCATGTGGGAATGATTTACAAGATTGTAGTTATGTTGTCAACTATGGTGATGGATCCT
ACACTCGAGGCGAACTTGGTCAAGATCATTTGGTTCTTGGAAGCACATCTGTTGAGAATT
TTGTCTTTGGTTGTGGAAGAAATAACAAAGGTCTATTTGGTTTAGCCTCAGGGATTATGG
GACTTGGAAGAAGTGATCTTTCTTTGATATCTCAAACATTTGAGACTTTTGGTGGTGTTT
TCTCCTACTGTTTGCCTTCAGCTGAAGCTAAGTCCTCTGGCTCATTAGTATTAGGAGGTG
ACAGTAACACTACAATTTTCAAGAACTCTACACCTATTTCCTACACTAGAATGTTAGCAA
ATCCACAGCTTGTTACCTTCTATTTTCTCAATCTAACCGGGGTTACTATCGGTGGGGTGG
CTATTCAAGATTCAGCTTTTGGGAAAACTGGGATGATCATTGATTCTGGTACAGTTATCA
CAAGGCTCCCACCAACAATGTACAAAGCTGTTAAAGCAGAGTTCTCGAAACAATTTTCAG
GGTACCCTTTTAAACAAGGAGTTTCAATTCTTGATACTTGTTTTGATCTTTCTGCATATG
AAGAAGTGAATATTCCCACTGTTAAAATGCAGTTTGAAGGTGGTGCTGAGATGGAAGTTG
ATGTTACTGGGGTTCTTTTTATTGTAAAAAGTGATGCATCACAAGTCTGTTTGGCTCTAG
CAAGCCTCCAATATGATGATGAGATTGGAATTATTGGAAATTATCAGCAGAAGAATACTA
GGGTTATATATGATATAAAACAGTCACAAGTTGGATTTGCAAAAGAGACATGTAGTTTCT
GA