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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g068270.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G49390.1)
Sequence

ATGGCTGCATATGCAGTTCCACCTGTAGAGGAGTTGCTGTCAAAACGAGTTCAAGAAATG
GTCCTTCACGGGGAGGAGCCACTTGGACCTTATATTTGCAGAAGTGGTGAAGATGTTGAT
GAAAAACAAGACATCATGGATACTTCTCCAATTCCTACAATTGATCTAAACCTCCTGTCT
TGTTCTGCAACATCAGATAACAAACGCGAACAAGAGTTGGAAAAACTTGGGTCAGCTCTA
TCTTCTTGGGGATGTTTTCAGGGAATAGGACACGGAATTTCAGTTTCTTTACTGGACAAG
ATCCGCCAAGTTTCACGGGAATTCTTCAAACAGCCAATGGAAGAGAAGAACAAGTATGCT
AAATCAGTTGTTGATTTCCAAGGTTATGGAGCTGATCCTATTCCAGAACAAGGTCAGTCC
CTTGATTGGTCTGATCGTCTCTTCCTCGAGGTGTTCCCTGAAGATGGAAGACAGTATAAC
TTCTGGCCACAAATCCCAATATCATTCAGAGAGGTCTTGGAAGATTATTCTGAGAAAATG
AAGATGGTCACGGAAATTACCTCTAAAGCTATGGCAAAGTCATTGAAACTGGAAGAAACT
TGCTTCTTAGAACAGTTTGGAAAAAAAGCGCAACTGCATGCAAGGTTTAACTACTACTCA
CCATGTCAGAGGCCTGATCTGGTTCTTGGCTTAAAACCCCATGCTGATGGAACAGGATAC
ACTATTATTTTACAAGATGAAGTAGGACTCCAAGTGCTCAAGGATGGAAAATGGTATACA
GTACCAAGAAATCCTACAGCTCTGCTTGTTCTCATGGGTGATCAAATGGAGATAATGAGC
AATGGAATATTCAAGAGCCCGGTGCATAGGGTAGTGAGTAATTCAGAGAGGGACAGAATT
TCTATTGCAATGTTCTACACACCTGAATTAGGGAAAGAAATCGGACCAGAAGATGACTTA
GTTAATGTGGATAGACCAAGGATATACAAGAAAGTGACAGATTATGCAGAAACTCACTGG
AAGTTTTACCAGCGTGGTATGAGAGCACTACACACTGCACACATTTAG

Peptide Sequence

PEP ID

Solyc06g068270.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G49390.1)
Sequence

MAAYAVPPVEELLSKRVQEMVLHGEEPLGPYICRSGEDVDEKQDIMDTSPIPTIDLNLLS
CSATSDNKREQELEKLGSALSSWGCFQGIGHGISVSLLDKIRQVSREFFKQPMEEKNKYA
KSVVDFQGYGADPIPEQGQSLDWSDRLFLEVFPEDGRQYNFWPQIPISFREVLEDYSEKM
KMVTEITSKAMAKSLKLEETCFLEQFGKKAQLHARFNYYSPCQRPDLVLGLKPHADGTGY
TIILQDEVGLQVLKDGKWYTVPRNPTALLVLMGDQMEIMSNGIFKSPVHRVVSNSERDRI
SIAMFYTPELGKEIGPEDDLVNVDRPRIYKKVTDYAETHWKFYQRGMRALHTAHI*

Transcript Sequence

Transcript ID

Solyc06g068270.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G49390.1)
Sequence

TATGCGTACATATAATGCTATCACTGTGGAACCTGAACTTCTTATCGGAAACCCACTGGA
TAGTGTAACTTGATCATAGAATTAGCATGGCTGCATATGCAGTTCCACCTGTAGAGGAGT
TGCTGTCAAAACGAGTTCAAGAAATGGTCCTTCACGGGGAGGAGCCACTTGGACCTTATA
TTTGCAGAAGTGGTGAAGATGTTGATGAAAAACAAGACATCATGGATACTTCTCCAATTC
CTACAATTGATCTAAACCTCCTGTCTTGTTCTGCAACATCAGATAACAAACGCGAACAAG
AGTTGGAAAAACTTGGGTCAGCTCTATCTTCTTGGGGATGTTTTCAGGGAATAGGACACG
GAATTTCAGTTTCTTTACTGGACAAGATCCGCCAAGTTTCACGGGAATTCTTCAAACAGC
CAATGGAAGAGAAGAACAAGTATGCTAAATCAGTTGTTGATTTCCAAGGTTATGGAGCTG
ATCCTATTCCAGAACAAGGTCAGTCCCTTGATTGGTCTGATCGTCTCTTCCTCGAGGTGT
TCCCTGAAGATGGAAGACAGTATAACTTCTGGCCACAAATCCCAATATCATTCAGAGAGG
TCTTGGAAGATTATTCTGAGAAAATGAAGATGGTCACGGAAATTACCTCTAAAGCTATGG
CAAAGTCATTGAAACTGGAAGAAACTTGCTTCTTAGAACAGTTTGGAAAAAAAGCGCAAC
TGCATGCAAGGTTTAACTACTACTCACCATGTCAGAGGCCTGATCTGGTTCTTGGCTTAA
AACCCCATGCTGATGGAACAGGATACACTATTATTTTACAAGATGAAGTAGGACTCCAAG
TGCTCAAGGATGGAAAATGGTATACAGTACCAAGAAATCCTACAGCTCTGCTTGTTCTCA
TGGGTGATCAAATGGAGATAATGAGCAATGGAATATTCAAGAGCCCGGTGCATAGGGTAG
TGAGTAATTCAGAGAGGGACAGAATTTCTATTGCAATGTTCTACACACCTGAATTAGGGA
AAGAAATCGGACCAGAAGATGACTTAGTTAATGTGGATAGACCAAGGATATACAAGAAAG
TGACAGATTATGCAGAAACTCACTGGAAGTTTTACCAGCGTGGTATGAGAGCACTACACA
CTGCACACATTTAGTACTACTATATATGTATGTCTTCCTTATGTTATTTGGGCATGGATA
GAAAGTCTACAACAACAATTTTGGCTTTACATATCTTTCACCTCATGTTCGGAAGAAGAA
GGCACCATTCTAATAAATGAATCATCCAATGATGATTTGGTTTGCAATATCTG