Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g068160.3.1
CDS Infomation

SNF4
Sequence

ATGCAGGCAACAGCGGAGATACAAGCGGCGGGAAGCCCTCGTAGATCCCAGAAGCATCAG
ATGCTTAAAGACAAGCAGGTGAAGGATCTAATTATTGATAAAAGGAGACTTGTGGAGGTT
CCGTATACAGCCACGCTGGCAGATACAATAAACACTCTGATGGCTAACAAGGTGGTGGCG
GTTCCGGTGGCTGCACCGCCTGGGCACTGGATTGGCGCCGGCGGTTCTATGATTTTGGAA
TCTGATAAACAGACGGGTGCTGTACGAAAACATTATATAGGGATGGTAACTATGCTTGAT
ATTCTCGCATATATTGCTGGAAACGGTTATCGTGATGATGATGATGATCTTACGAAAAAG
ATGATGGTTCCTGTTTCTTCGATTATTGGGCATTGTCTTGAAAGTCTTAGTTTGTGGACC
CTCAGCCCTAACACAAGTATTGTGGATTGTATGGAAGTTTTCAGCAAAGGCATACATCGA
GCCATGGTACCAGTGAATGGACGATTAGAAAATGTAGTTGGCGTTGAGCTCACCGAGTCA
GCGTCATGTTACCGAATGCTAACACAAATGGATCTGCTTAGGTTTTTGAATGACCAGCAG
GAGCTTAAAGCGATCATGTCGCACAAGGTCTCGGATAAACAACTCCAAGCAATCACAGAC
ACTGTTTTCGGTGTGACTAATAAGGCGAAAGTTATCGATGTGATCAAATGCATGAGAACA
GCTTCACTAAATGCAGTACCAATTGTGGAGTCATCCAATGACATAACAGAAGATCATACT
CAGCTTGTGAATGGGAAAAAGAGGAAGATTGTAGGAACATTTTCAGCAACGGACTTGAGA
GGCTGTCCTGTATCGAAAATGCAGCCTCTATTGAACCTAGAGGTCCTCGATTTCTTGAAA
ATGCTGTCGGGAGCTCCTAATACCGGGCTGAGATCTTCATGGAGGGAACAAGTGACATGC
CGCCCCGAATCGTCACTCGGGGAAGTGGTAGAGAAAGTTGTTTCAGACAATGTGCATCGT
GTTTGGGTGGTGGATGAACAAGGCTTGCTGGAAGGAGTTGTATCCCTAACTGACATGATA
AGAGTCATCAGGCTCTGGTATCTTACTGAGTTTTTGCAGTGA

Peptide Sequence

PEP ID

Solyc06g068160.3.1
PEP Infomation

SNF4
Sequence

MQATAEIQAAGSPRRSQKHQMLKDKQVKDLIIDKRRLVEVPYTATLADTINTLMANKVVA
VPVAAPPGHWIGAGGSMILESDKQTGAVRKHYIGMVTMLDILAYIAGNGYRDDDDDLTKK
MMVPVSSIIGHCLESLSLWTLSPNTSIVDCMEVFSKGIHRAMVPVNGRLENVVGVELTES
ASCYRMLTQMDLLRFLNDQQELKAIMSHKVSDKQLQAITDTVFGVTNKAKVIDVIKCMRT
ASLNAVPIVESSNDITEDHTQLVNGKKRKIVGTFSATDLRGCPVSKMQPLLNLEVLDFLK
MLSGAPNTGLRSSWREQVTCRPESSLGEVVEKVVSDNVHRVWVVDEQGLLEGVVSLTDMI
RVIRLWYLTEFLQ*

Transcript Sequence

Transcript ID

Solyc06g068160.3.1
Transcript Infomation

SNF4
Sequence

TGAACCTATATTAGTGCACTTTCAGTTTTTCAACTTCCTCTTTGTTTTCACCCAGCACAC
AAAATTTTTTTAAAAAAATACTCATACAAACAAAATGCAGGCAACAGCGGAGATACAAGC
GGCGGGAAGCCCTCGTAGATCCCAGAAGCATCAGATGCTTAAAGACAAGCAGGTGAAGGA
TCTAATTATTGATAAAAGGAGACTTGTGGAGGTTCCGTATACAGCCACGCTGGCAGATAC
AATAAACACTCTGATGGCTAACAAGGTGGTGGCGGTTCCGGTGGCTGCACCGCCTGGGCA
CTGGATTGGCGCCGGCGGTTCTATGATTTTGGAATCTGATAAACAGACGGGTGCTGTACG
AAAACATTATATAGGGATGGTAACTATGCTTGATATTCTCGCATATATTGCTGGAAACGG
TTATCGTGATGATGATGATGATCTTACGAAAAAGATGATGGTTCCTGTTTCTTCGATTAT
TGGGCATTGTCTTGAAAGTCTTAGTTTGTGGACCCTCAGCCCTAACACAAGTATTGTGGA
TTGTATGGAAGTTTTCAGCAAAGGCATACATCGAGCCATGGTACCAGTGAATGGACGATT
AGAAAATGTAGTTGGCGTTGAGCTCACCGAGTCAGCGTCATGTTACCGAATGCTAACACA
AATGGATCTGCTTAGGTTTTTGAATGACCAGCAGGAGCTTAAAGCGATCATGTCGCACAA
GGTCTCGGATAAACAACTCCAAGCAATCACAGACACTGTTTTCGGTGTGACTAATAAGGC
GAAAGTTATCGATGTGATCAAATGCATGAGAACAGCTTCACTAAATGCAGTACCAATTGT
GGAGTCATCCAATGACATAACAGAAGATCATACTCAGCTTGTGAATGGGAAAAAGAGGAA
GATTGTAGGAACATTTTCAGCAACGGACTTGAGAGGCTGTCCTGTATCGAAAATGCAGCC
TCTATTGAACCTAGAGGTCCTCGATTTCTTGAAAATGCTGTCGGGAGCTCCTAATACCGG
GCTGAGATCTTCATGGAGGGAACAAGTGACATGCCGCCCCGAATCGTCACTCGGGGAAGT
GGTAGAGAAAGTTGTTTCAGACAATGTGCATCGTGTTTGGGTGGTGGATGAACAAGGCTT
GCTGGAAGGAGTTGTATCCCTAACTGACATGATAAGAGTCATCAGGCTCTGGTATCTTAC
TGAGTTTTTGCAGTGA