Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g068140.3.1
CDS Infomation	Methyl-CpG binding domain containing protein, expressed (AHRD V3.3 *** Q2QM23_ORYSJ)
Sequence	ATGGCAAGTCCTATGGAGAAGGGGAGTCATGATGATGAAATTGTGTCGGTGGAGCTTCCT GCACCTCCTTCTTGGAAAAAATTGTTCACCCCAAAGCAAGGGGGTACACCGAAGAAGAGT GAGGTAGTATTCATCGCTCCAACAGGAGAGGAGGTCAAAAACCGCAAACAGTTGGAGCAG TATCTCAAAGCACATCCTGGAAGCCCTGGTATATCAGAATTTGATTGGAGTACCGGTGAG ACTCCAAGGAGATCAGCAAGGATCAGTGAGAAGGTCAAGGCAATGAGACCACCTTCACTA CTTGAATCACCAAAGAAAAAACGCCGGACATCCTCTGGTACAAAGAAAGATAGCAAGGAA AAGGCTGCTGCAAAAGCTGAGATGGGAAGTGCAGAAACTAAAGGGATGGAATCTTCCAAA GAAGAAAATGAAAACTTGGAGAAGAAAGCTGGAGAAGCAGAAGCTGAAATGCAGGACAAG GGGAAGAAAGAGGCGGAAGCTGTGGTAGAAGATGAGCGCATAGAGGATGCTAAACTGCCC CCTGCGGAGAAGCCAGATTCTGAATCGGAGGAATTTCACAGTGCTGATGACGGCAATCAG GACAAGTCGGAAAATGCAGAAGCTGAAATGGAGGACAAGAAGAAGAAAGAGGTGGAAGCT GTGGAAAAAGATAAGTGCTTAAAAGGTGCTGAACTGCCCTCTGGGGACGAGCGAGAGCCT GAATCTGAGGAAGTTCACAGTGCTGATGTTGGTAGACACAAGTCAGAAAATGCAGGTATC GAGGAAAAACAAGTATCTGAAGAAAAGCTGGAGTCTCAAAACAAACTAGAAGAACTCGCT GCAGAAGGGACCAATGTCACCGTAGGAGGGAGTGCCGGCCAAGCAGAACATGCTGTTGAC GGGGTATCTAAGGATGCCCACAGCAATGATGGTGAAGATGGGCCGAAAGAGGAGGAGAAA AAAACGGAAGGAACTGAGTTAGCTATGGAAAATAACAATATTAATCAACCAGGGTTGGTT CATCCCCAGCAGCATCAATCACCTGCGCCTATTAGCTGCTGA

Peptide Sequence

PEP ID	Solyc06g068140.3.1
PEP Infomation	Methyl-CpG binding domain containing protein, expressed (AHRD V3.3 *** Q2QM23_ORYSJ)
Sequence	MASPMEKGSHDDEIVSVELPAPPSWKKLFTPKQGGTPKKSEVVFIAPTGEEVKNRKQLEQ YLKAHPGSPGISEFDWSTGETPRRSARISEKVKAMRPPSLLESPKKKRRTSSGTKKDSKE KAAAKAEMGSAETKGMESSKEENENLEKKAGEAEAEMQDKGKKEAEAVVEDERIEDAKLP PAEKPDSESEEFHSADDGNQDKSENAEAEMEDKKKKEVEAVEKDKCLKGAELPSGDEREP ESEEVHSADVGRHKSENAGIEEKQVSEEKLESQNKLEELAAEGTNVTVGGSAGQAEHAVD GVSKDAHSNDGEDGPKEEEKKTEGTELAMENNNINQPGLVHPQQHQSPAPISC*

Transcript Sequence

Transcript ID	Solyc06g068140.3.1
Transcript Infomation	Methyl-CpG binding domain containing protein, expressed (AHRD V3.3 *** Q2QM23_ORYSJ)
Sequence	GAAGGATGTCACGTAATTTAGGTGACACCTGATTTTCTTAGTCAATTTCAAGAAAAAGTC ACTTTATTATAATAAAATATTTTTTTAATAGAAGGTAATAATATACCGTTTATCTAAAAA TTATTCTAGATAAAAACATTATAAATTAATTTATTTTCCTTAAATATCATAATGATAAAA TGGGAAAGAGGAGTCATAAGAGGAAATTGTCGGTTTGGATGTGTTAACTGATAAGGCTCG TTTGTCCTTGAAAGTTGGCTACGTGGCACGTGTGGTCTATCTGTTTCACGGCGTGGCGGT TGCTATCAGCCAAGTTTTATCTAATCAAAAACACAACCTCTTTACTGCAAAACTTCATAC ATGCCCATCACAAACTTTACTTCAATTTCTATCTTTGTGAATTTTATTTTACTGTAAACA AAGTTGGAATTTTTTTTTTCTAACCATGGCAAGTCCTATGGAGAAGGGGAGTCATGATGA TGAAATTGTGTCGGTGGAGCTTCCTGCACCTCCTTCTTGGAAAAAATTGTTCACCCCAAA GCAAGGGGGTACACCGAAGAAGAGTGAGGTAGTATTCATCGCTCCAACAGGAGAGGAGGT CAAAAACCGCAAACAGTTGGAGCAGTATCTCAAAGCACATCCTGGAAGCCCTGGTATATC AGAATTTGATTGGAGTACCGGTGAGACTCCAAGGAGATCAGCAAGGATCAGTGAGAAGGT CAAGGCAATGAGACCACCTTCACTACTTGAATCACCAAAGAAAAAACGCCGGACATCCTC TGGTACAAAGAAAGATAGCAAGGAAAAGGCTGCTGCAAAAGCTGAGATGGGAAGTGCAGA AACTAAAGGGATGGAATCTTCCAAAGAAGAAAATGAAAACTTGGAGAAGAAAGCTGGAGA AGCAGAAGCTGAAATGCAGGACAAGGGGAAGAAAGAGGCGGAAGCTGTGGTAGAAGATGA GCGCATAGAGGATGCTAAACTGCCCCCTGCGGAGAAGCCAGATTCTGAATCGGAGGAATT TCACAGTGCTGATGACGGCAATCAGGACAAGTCGGAAAATGCAGAAGCTGAAATGGAGGA CAAGAAGAAGAAAGAGGTGGAAGCTGTGGAAAAAGATAAGTGCTTAAAAGGTGCTGAACT GCCCTCTGGGGACGAGCGAGAGCCTGAATCTGAGGAAGTTCACAGTGCTGATGTTGGTAG ACACAAGTCAGAAAATGCAGGTATCGAGGAAAAACAAGTATCTGAAGAAAAGCTGGAGTC TCAAAACAAACTAGAAGAACTCGCTGCAGAAGGGACCAATGTCACCGTAGGAGGGAGTGC CGGCCAAGCAGAACATGCTGTTGACGGGGTATCTAAGGATGCCCACAGCAATGATGGTGA AGATGGGCCGAAAGAGGAGGAGAAAAAAACGGAAGGAACTGAGTTAGCTATGGAAAATAA CAATATTAATCAACCAGGGTTGGTTCATCCCCAGCAGCATCAATCACCTGCGCCTATTAG CTGCTGATGCATCATCTGCATCAACCTTAGGACATTTTCTGTTACATGTTTACTGACTTT TAGATTCAATTTGATTATTGTAATCGTAAACTTCGATTCTCTGGTAGTTTAGTGTCTAGT TTCCAGGACTGTAGTACTCGCATTGTGGTGTATGTATTTGTTTCTGTCGTGGTACACTTG GATCTGTTATTAAAACTTGATGTAGAATGTTTTAGGAGATGATTTGTGACTTGCAGAGTT CTATTTGCTATAACATGTAGAGCTTTCGAATTGCCCCTTTGTGATGAGTAATGTGTTCAT AACTGAATATTTTGTTGGGGAA