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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g067970.2.1
CDS Infomation

DUF1644 family protein (AHRD V3.3 *** G7LIM9_MEDTR)
Sequence

ATGCCGAAAGATAGAATGGTGAACTCTTCGTCCTTCAACGGGGCAAGGGCATCTCCTTAT
GATTGCAGCTCAAAGACTACTGACCTACCACCAGTAGAGAGTGAAAGAGAATGGGAAGAA
GCTAGGTGCGCTATATGTATGGAGCATCCACACAATGCTGTCCTTCTACTTTGCTCATCC
GGGGAAAAGGGTTGCCTGCCTTATATGTGTGACACAAGTTACCGTCATTCAAATTGTCTT
GATCAATTTTGTAAACTATCATCCGGAACACAATCAGAAGTTCCACAAGAGCGAAGTACT
GTATCGGGAACGATGCTCCACAGGGGAAATCAGGTACAACCTTCATCAAGAACAACCTGG
TTTGCTGGGGGGCAGCAACCAGAGCTTGTCTGCCCTCTTTGCCGGGGACAGATTAAAGGA
TGGATTGTCGTAGAGGCAGCTCGTAAATTCATGAATTCCAAACACAGGAGTTGTTCGTTG
GAGACATGCAATTTTAATGGCAATTATGGAGAACTAAGAAAGCATGCCAGGCTTGAGCAT
CCCTCAGACAGGCCAGCCGAGGCTGACCCTCAAAGGCTGTCTGATTGGAGAAGGTTGGAG
ATTCAAAGAGACGCTGGGGATACTCTCAGTGCATATCAGACACCATTAGGTGATCTCGTT
CCTCCAGATGAGTTCTTTGAGATGCCTGCTGGTATGTTTGACTTCCTTGATGATGTGTAC
TCTGAGCCTGAGGATGGATTTAGTCCAGACATCAATCTGTTGTTGGATTTGGAATTTGAG
TTCTCCTTTCTGAATGACCTCCCATATGTGACTTGGTCATATGAAGAGATGATGATGCTG
TTAGACTGA

Peptide Sequence

PEP ID

Solyc06g067970.2.1
PEP Infomation

DUF1644 family protein (AHRD V3.3 *** G7LIM9_MEDTR)
Sequence

MPKDRMVNSSSFNGARASPYDCSSKTTDLPPVESEREWEEARCAICMEHPHNAVLLLCSS
GEKGCLPYMCDTSYRHSNCLDQFCKLSSGTQSEVPQERSTVSGTMLHRGNQVQPSSRTTW
FAGGQQPELVCPLCRGQIKGWIVVEAARKFMNSKHRSCSLETCNFNGNYGELRKHARLEH
PSDRPAEADPQRLSDWRRLEIQRDAGDTLSAYQTPLGDLVPPDEFFEMPAGMFDFLDDVY
SEPEDGFSPDINLLLDLEFEFSFLNDLPYVTWSYEEMMMLLD*

Transcript Sequence

Transcript ID

Solyc06g067970.2.1
Transcript Infomation

DUF1644 family protein (AHRD V3.3 *** G7LIM9_MEDTR)
Sequence

ATGCCGAAAGATAGAATGGTGAACTCTTCGTCCTTCAACGGGGCAAGGGCATCTCCTTAT
GATTGCAGCTCAAAGACTACTGACCTACCACCAGTAGAGAGTGAAAGAGAATGGGAAGAA
GCTAGGTGCGCTATATGTATGGAGCATCCACACAATGCTGTCCTTCTACTTTGCTCATCC
GGGGAAAAGGGTTGCCTGCCTTATATGTGTGACACAAGTTACCGTCATTCAAATTGTCTT
GATCAATTTTGTAAACTATCATCCGGAACACAATCAGAAGTTCCACAAGAGCGAAGTACT
GTATCGGGAACGATGCTCCACAGGGGAAATCAGGTACAACCTTCATCAAGAACAACCTGG
TTTGCTGGGGGGCAGCAACCAGAGCTTGTCTGCCCTCTTTGCCGGGGACAGATTAAAGGA
TGGATTGTCGTAGAGGCAGCTCGTAAATTCATGAATTCCAAACACAGGAGTTGTTCGTTG
GAGACATGCAATTTTAATGGCAATTATGGAGAACTAAGAAAGCATGCCAGGCTTGAGCAT
CCCTCAGACAGGCCAGCCGAGGCTGACCCTCAAAGGCTGTCTGATTGGAGAAGGTTGGAG
ATTCAAAGAGACGCTGGGGATACTCTCAGTGCATATCAGACACCATTAGGTGATCTCGTT
CCTCCAGATGAGTTCTTTGAGATGCCTGCTGGTATGTTTGACTTCCTTGATGATGTGTAC
TCTGAGCCTGAGGATGGATTTAGTCCAGACATCAATCTGTTGTTGGATTTGGAATTTGAG
TTCTCCTTTCTGAATGACCTCCCATATGTGACTTGGTCATATGAAGAGATGATGATGCTG
TTAGACTGAGTGCTAGTTGATCACAACTAGTGCTAGATCCGAAAGCAGGTGAGCTAGTAG
ATAAGCTCCATCAGATAATCACGGGGAAAGACCAGGAACGTGGAGGAGACACAACAGGTC
ATCAAGGTACATGCCAAGATCCTTCGGGCATTAAACCATTGAATTAATGCTTGGTTCCTT
TCAGGTATCTTGTCATCACTGAATGGAGGAATTTTATGTCAGAATTCCTGTTATTTGTAC
TCTCAAATGAACCATCGCTGTTGTCGTTCTTTTCCATTCCTACTTCGATACTTCAAGAAC
AAGTGTTTCCCCCCTCATGAAATTATAGTTCCTTGTTTACTATCTCTGAACATATGAAAC
ATAAAAGCTTGTTAAGATCATAAGGGAATTTTTTAAAGGATGTTAAGCTTAACCTCATGC
CTCCCTATAGTACGTCTGTTTTTCAATGTTTGTATCGTAATTTTCCAGCTATGGCATATG
TTTATGATTAGGCAAATTTACAGTTTGCGACGTAGAAAAATTCTCTTATGGTCGATTCTG
CTACGTTAATAAGGAATTAATGTTTTCCATATCTAAACCAGTTGGAAAAACTAGTTAGTG
ATCGATTAGACAAATTAAACGAGATTTAGTTGCGTTAGGGTGAAAGTTAATGTAGATTTA
TTATGGAGTTGCGAAATAGTATATAAATTTACTGCACCAATGAAGAAACTGGTAAAATCA
TGTAGAAATGACAACAAATTTAATATGATTGTTTTGTTTTATCTGTTTTTTTGTTTTTTT
TTTTAAAAAAAGAAGATCGATTAGAAATGTTTCATTACTTGGTTGTATGTGTGAAAACAG
AGTCGCCCATTAACTATTTTGGAAATTAGATTTTGAAAAGGCATTTGGAACCTTTGTTTG
AAAATAAAGATAAAAAAATCTACTGAGGAAGGGAAGGTATTAAACCACCTGAGGAAATTT
GCAAACGCAATTAACCTGTAAATTTAAATATTTTATCGCCAAAACAAATACTATAACTTT
TTTGAATGTGGAAATTTGAAGGGTGACTAAGGAATTCATTTTCTTGGTAATTAATTGTTT
CATTAACTCAACCTGTGAATTAAGTTAACTAGTTTTGTGAAGGACCAATTACTTTATCTA
GTTACTTGTGGTATCCTTTCAAACTTTGAACACACATTCTTTACCACATAACATCCAAGA
AGATCGAAATTATCAATTTATCTAGTTAAAAAAGGTAT