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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g067860.3.1
CDS Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

ATGGGTTCTCTAACAACTCCACCAAAACTACTAGTAGTAGATTTCAACAATGAAGAATTA
AGGCCAGGCACAACTACTTGGGAATCTACCTGTAAAGAAATTAGACATGCCTTTGAAAAC
CATGGTTGTTTCATAGCACTTTATGACAAAATTTCACCACAACTTCAAAAATCCATTTTT
CAAGATAATTCACAACAATTATTTGAACTTCCTTTAGAGAGAAAAGTCCTAAACATTAGT
GAAAAGCCTTATCATGGTTATGTTGGCCAAATTTCATTTCTACCTAATCATGAGGCTTTT
GGTATTGATTATGCAACTACTTCTCAAGGTATTCAAACCTTTTCCAACCTCATGTGGCCA
CAAGGAAATGACTCTTTCTGTGAGAGTTCGTTGATGTTTTCCAAGATTGTGGCGGCGTTG
GACAACAAGGTTGTTAGAATGTTATTTGAGAGCTATGGAATCACAAAAAATTGTGAATCA
TATGTTGAATCAACCACATATCTCCTTAGATATTTGAAATATAACACTCCAAAGACTAAG
GAAACTAGCATGGTGTTTCCCCCTCATACCGATAAAACGTTCACTACCATACTATACCAA
AATCACATTTCAGGGTTAGAAGTTCAAACTCGAGACCTTCAATGGATAACTCTTGAGTTT
CCACCATCTTCTTTTGTAGTCATGGCTGGTGAAGCACTCAGAGGATGGAGCAATGATAGG
GTGCTTACTCCAATACATAGGGTAATTATGGATATAAATGGGAGTGAAACAAGATATACT
ATTGGATTATTTACTTTTTTAAAGAATGATAAAATTATAGAAGTGGATGAAGAATTAATT
GATGAAGAACATCCATTGAAGTTTAAGCCATTTGTTCATCTTGATTTGATCAAGTTTTTT
GATACAGAACGTGGTCGAAGATCACAGAATTTAGTAGAAGATTTTTGTGGTGTTTGA

Peptide Sequence

PEP ID

Solyc06g067860.3.1
PEP Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

MGSLTTPPKLLVVDFNNEELRPGTTTWESTCKEIRHAFENHGCFIALYDKISPQLQKSIF
QDNSQQLFELPLERKVLNISEKPYHGYVGQISFLPNHEAFGIDYATTSQGIQTFSNLMWP
QGNDSFCESSLMFSKIVAALDNKVVRMLFESYGITKNCESYVESTTYLLRYLKYNTPKTK
ETSMVFPPHTDKTFTTILYQNHISGLEVQTRDLQWITLEFPPSSFVVMAGEALRGWSNDR
VLTPIHRVIMDINGSETRYTIGLFTFLKNDKIIEVDEELIDEEHPLKFKPFVHLDLIKFF
DTERGRRSQNLVEDFCGV*

Transcript Sequence

Transcript ID

Solyc06g067860.3.1
Transcript Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

TAGGAATAAAGTTTTTTTTTCTACAAGAAGCCTATATAAAACCAAGCAATTAGACATTTT
TTGGGCAACCAAAAGAACAAAAAGAAAAAACAAAGAACTATAGAGATATACTATGGGTTC
TCTAACAACTCCACCAAAACTACTAGTAGTAGATTTCAACAATGAAGAATTAAGGCCAGG
CACAACTACTTGGGAATCTACCTGTAAAGAAATTAGACATGCCTTTGAAAACCATGGTTG
TTTCATAGCACTTTATGACAAAATTTCACCACAACTTCAAAAATCCATTTTTCAAGATAA
TTCACAACAATTATTTGAACTTCCTTTAGAGAGAAAAGTCCTAAACATTAGTGAAAAGCC
TTATCATGGTTATGTTGGCCAAATTTCATTTCTACCTAATCATGAGGCTTTTGGTATTGA
TTATGCAACTACTTCTCAAGGTATTCAAACCTTTTCCAACCTCATGTGGCCACAAGGAAA
TGACTCTTTCTGTGAGAGTTCGTTGATGTTTTCCAAGATTGTGGCGGCGTTGGACAACAA
GGTTGTTAGAATGTTATTTGAGAGCTATGGAATCACAAAAAATTGTGAATCATATGTTGA
ATCAACCACATATCTCCTTAGATATTTGAAATATAACACTCCAAAGACTAAGGAAACTAG
CATGGTGTTTCCCCCTCATACCGATAAAACGTTCACTACCATACTATACCAAAATCACAT
TTCAGGGTTAGAAGTTCAAACTCGAGACCTTCAATGGATAACTCTTGAGTTTCCACCATC
TTCTTTTGTAGTCATGGCTGGTGAAGCACTCAGAGGATGGAGCAATGATAGGGTGCTTAC
TCCAATACATAGGGTAATTATGGATATAAATGGGAGTGAAACAAGATATACTATTGGATT
ATTTACTTTTTTAAAGAATGATAAAATTATAGAAGTGGATGAAGAATTAATTGATGAAGA
ACATCCATTGAAGTTTAAGCCATTTGTTCATCTTGATTTGATCAAGTTTTTTGATACAGA
ACGTGGTCGAAGATCACAGAATTTAGTAGAAGATTTTTGTGGTGTTTGATATTATTATAT
GAATTTTCATGTAATTTATGTTTGGGTTCTTTTAATTTTCTATATTCAAACCTAGTAATT
TACTTTCTATGTTGCTTGTTTGTAATTTGTATAATGAACACAATGAAATATTGTTCATGT
ATGATGCATCTAAGGAATTTGATTTCTTTTGTACTCTAATTTAGATCTTCATATTTAATG
TGAGTTCAAAATGAATAATTTAACATTGACATTTAACAAATGTGGGTGAAAAAATATATT
ACTACAGTTTGAAAAATAGAAAAAAGTAGATTTAAAAATAGCATTTTTTTTCTACACATG
CATCGTCTAAAATAATGATTTAATTTTTATTAGCGGTAGCAAAAAAAGAAATTTCATACA
GGTCAAAATAAAATAAAAATTAAAAATGTTTTCTATGGATATAAAGCTTTATGAGATACA
GGAGGCACCATAATTTATCTTATGACGTGAAATAAAAATTAGGAATTAACTTATATAATA
GAGTGGTCCACTAAAGTTTTGATTCGTATGGGATCATATCCCAAAGTGGTTGTTGTCCTG
TGAATGGTCTGTTTAGTCCTTACTTTACTATATTGGGCCGGAAGAATTTGTCTTATGAAA
ATTAAAG