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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g066840.3.1
CDS Infomation

2-oxoglutarate-dependent dioxygenase-related family protein (AHRD V3.3 *** B9GL08_POPTR)
Sequence

ATGAATTGTGAAAACATCAAGCTTCCTAAAATAGACTTTTCTCATGAAGACCTAAAGCCA
GGCACACTTGTATGGAACCAAGTGAAAAGCCAAGTCCACAAAGCACTAGTAGAATATGGT
TGTTTTGAAGCATCCTTTTATAAAATTCCAATACACCTTAAAAAATCCATTTTTGAATCT
TTACAAGAGATTTTTGATCTCCCTTTACAAACCAAACTTGAAAACATTTCAACCAAACCC
TTCCATGGCTACGTTGGACAATTTCCTTCGCTTCCACTCTTTGAAAGTATGGGCATTGAT
GATGCTAACATTCCGCGTAAAGCTGATGAATTCGCTCAAATTTTATGGCCCCAAGGAAAT
CCTTCTTTCTGTAAAACTATTCAGTCATACTCTGAGCAACTATCAGAGTTAGATCAGACA
GTAAGGAGAATGGTTTTGGAGAGCTTAGGTTTAGAAAAGTACATGGATGAGCATATGAAT
TCAACCAATTTCGTTCTTCAATTGATGAAGTATAACACACCTCAAAGCAATACTGAGACT
GAAATAGGAGTAAGTGCTCATACAGACAAGAGCATTGCTACTATACTCTACCAAAATCAG
ATAAACGGTCTTCAAGTTATGAACAAAAATGGACAGTGGATCAATGTTGAACCTACACAA
GACACTTTTACCGTCATGATTGGAGACTCTCTACATGCATGGACAAATGGTCGAATGCAT
GCACCATATCATAGAGTGATGATGAGGGGAAACAAAGCAAGATACTCAGTTGGTTTGTTT
TCAGTACCTAAAGGTGACTACACAATAAAGGCACCAAAAGAGATGGTAGATGAAGAGAAT
CCTCTACTATATAAGCCCTTTGATCTTCATGGACTTCTTGCTTTCACCAACACTGAAGAA
GGCATGAGATGTGAATCTGCTTTGAAGACTTATTGTGGACTTTAA

Peptide Sequence

PEP ID

Solyc06g066840.3.1
PEP Infomation

2-oxoglutarate-dependent dioxygenase-related family protein (AHRD V3.3 *** B9GL08_POPTR)
Sequence

MNCENIKLPKIDFSHEDLKPGTLVWNQVKSQVHKALVEYGCFEASFYKIPIHLKKSIFES
LQEIFDLPLQTKLENISTKPFHGYVGQFPSLPLFESMGIDDANIPRKADEFAQILWPQGN
PSFCKTIQSYSEQLSELDQTVRRMVLESLGLEKYMDEHMNSTNFVLQLMKYNTPQSNTET
EIGVSAHTDKSIATILYQNQINGLQVMNKNGQWINVEPTQDTFTVMIGDSLHAWTNGRMH
APYHRVMMRGNKARYSVGLFSVPKGDYTIKAPKEMVDEENPLLYKPFDLHGLLAFTNTEE
GMRCESALKTYCGL*

Transcript Sequence

Transcript ID

Solyc06g066840.3.1
Transcript Infomation

2-oxoglutarate-dependent dioxygenase-related family protein (AHRD V3.3 *** B9GL08_POPTR)
Sequence

CTCCAAAAATTTTTGGTTGTGTTCTTCCAAATCCTATATAAATAGGTTCAACTGGATGCA
TAAAATTAAGCATAACAAAAATCTCTTTCTTTTAAAGGAAATATGAATTGTGAAAACATC
AAGCTTCCTAAAATAGACTTTTCTCATGAAGACCTAAAGCCAGGCACACTTGTATGGAAC
CAAGTGAAAAGCCAAGTCCACAAAGCACTAGTAGAATATGGTTGTTTTGAAGCATCCTTT
TATAAAATTCCAATACACCTTAAAAAATCCATTTTTGAATCTTTACAAGAGATTTTTGAT
CTCCCTTTACAAACCAAACTTGAAAACATTTCAACCAAACCCTTCCATGGCTACGTTGGA
CAATTTCCTTCGCTTCCACTCTTTGAAAGTATGGGCATTGATGATGCTAACATTCCGCGT
AAAGCTGATGAATTCGCTCAAATTTTATGGCCCCAAGGAAATCCTTCTTTCTGTAAAACT
ATTCAGTCATACTCTGAGCAACTATCAGAGTTAGATCAGACAGTAAGGAGAATGGTTTTG
GAGAGCTTAGGTTTAGAAAAGTACATGGATGAGCATATGAATTCAACCAATTTCGTTCTT
CAATTGATGAAGTATAACACACCTCAAAGCAATACTGAGACTGAAATAGGAGTAAGTGCT
CATACAGACAAGAGCATTGCTACTATACTCTACCAAAATCAGATAAACGGTCTTCAAGTT
ATGAACAAAAATGGACAGTGGATCAATGTTGAACCTACACAAGACACTTTTACCGTCATG
ATTGGAGACTCTCTACATGCATGGACAAATGGTCGAATGCATGCACCATATCATAGAGTG
ATGATGAGGGGAAACAAAGCAAGATACTCAGTTGGTTTGTTTTCAGTACCTAAAGGTGAC
TACACAATAAAGGCACCAAAAGAGATGGTAGATGAAGAGAATCCTCTACTATATAAGCCC
TTTGATCTTCATGGACTTCTTGCTTTCACCAACACTGAAGAAGGCATGAGATGTGAATCT
GCTTTGAAGACTTATTGTGGACTTTAAATATGATTATATTTGGAACTAGTAGAATAAATA
TGCATGCTCCTAGTGAGTATATGCTTGTGTTTTAATTTTTATGTACTGGTCTGAGTAATA
ATATTGTTACACTAACTCAGAGAACCAGATTAATAAAAGTGGTTCAGTCTTTTTTTTTAA
AAAAAACTTTCGGAATGATATTATTACTAGCACTACTATGTTTGGATGGTT