Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g065850.2.1
CDS Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

ATGTATAGAGTTGCAAAAGCATCAGAGTACTTGGTGGTAACAGGGGTAGGGATCAATGAT
ATAAATATAACAAAGAAAGCATGGATACTTCCAGGGCAATCATGGACAAAATTTGATGTT
TCACCTGTGAATTACACATTTGAAGTCCAAGCTATGAGTGCTGAAAAGCTCCCTTTTATT
CTTCCAGCTGTTTTCACAGTTGGTCCTAGACTTGATGATGAAGCTAGCCTCTTGAAATAT
GCAAAACTTATCTCTCCACATGACAAATACTCAAACCATGTCAATGATCTTGTTCAAGGT
ATCATTGAAGGAGAAACTAGAGTTCTTGCTGCATCAATGACAATGGAAGAGATATTCAAA
GGAACCAAACAGTTCAAACAAGAAGTATTCCAGAAAGTACAACTTGAACTAAACCAATTC
GGTCTCTTAATCTACAATGCCAACGTCAAACAACTCGTTGATGTTCCAGGACACGAGTAT
TTCTCCTACTTAGGTCAAAAGACTCAAATGGAAGCTGCAAACCAAGCTAAAATAGACGTG
GCGGAAGCTAGAATGAAAGGGGAGATAGGGGCAAAGCTAAGATCAGGACAAACGCTACAG
AACGCAGCTAAGATCGATGCAGAAACAAGGATTATATCAACACAAAGGGAAGGAGAAGGG
AAGAAAGAAGAGATAAAAGTGAAGACAGAAGTGAAGGTATTTGAAAACCAGAGAGAAGCA
GAAGTTGCTGAAGCAAATGCAGTGTTGGCAAAGAAGAAAGCAGGGTGGGCTAAAGAAGCA
CAAGTAGCAGAGGTGGAGGCAGAGAAAGCAGTGGCTTTAAGAGATGCTGAGTTGCAAAAG
GATGTAGAGAGGATGAATGCTTTAGCCATGACAGAGAAACTTAAGGCTGAGTTCTTGAGC
AAAGCTAGTGTTGAATATGAAACTAAGGTGCAAGAAGCAAATTGGGAGCTCTACAAGAAA
CAAAAAGAAGCAGAAGCATTTCTCTACGAAAAGGAGAAAGAAGCAGAGGCACAGAAAGCA
ACTGCAGAGGCTGATTTCTACAGACGTAAACAGATAATCGATGGCGATTTGTATGCAAAG
ATGAAGGAAGCAGAAGGACTGAAAGCTCTAGCAGAAGCTCAAGGCACATACTTGCGCACT
CTGTTAGAATCTTTGGGTGGAAACTATGGTGCTCTAAGGGATTACTTAATGATCAGTGGT
GGGATGTTTCAAGAACTTGCCAAGATTAACGGTGAAGCTATTCGAGGCCTACAACCCAAA
ATCAGCATTTGGACAAATGGAGGGTCTGAGTCAAATGCAGAAGGTGGTGGAAGTGCCCTA
AAAGAAGTTGCTGGCATCTACAAAACATTGCCACCATTGTTCAAGACTGTTCATGAACAG
ACTGGAATGATTCCACCTACATGGATGGGCACCTTGACAGATGACTCTTGTTTTCCTCAA
GAAATAATGCAATGA

Peptide Sequence

PEP ID

Solyc06g065850.2.1
PEP Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

MYRVAKASEYLVVTGVGINDINITKKAWILPGQSWTKFDVSPVNYTFEVQAMSAEKLPFI
LPAVFTVGPRLDDEASLLKYAKLISPHDKYSNHVNDLVQGIIEGETRVLAASMTMEEIFK
GTKQFKQEVFQKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKIDV
AEARMKGEIGAKLRSGQTLQNAAKIDAETRIISTQREGEGKKEEIKVKTEVKVFENQREA
EVAEANAVLAKKKAGWAKEAQVAEVEAEKAVALRDAELQKDVERMNALAMTEKLKAEFLS
KASVEYETKVQEANWELYKKQKEAEAFLYEKEKEAEAQKATAEADFYRRKQIIDGDLYAK
MKEAEGLKALAEAQGTYLRTLLESLGGNYGALRDYLMISGGMFQELAKINGEAIRGLQPK
ISIWTNGGSESNAEGGGSALKEVAGIYKTLPPLFKTVHEQTGMIPPTWMGTLTDDSCFPQ
EIMQ*

Transcript Sequence

Transcript ID

Solyc06g065850.2.1
Transcript Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

ATGTATAGAGTTGCAAAAGCATCAGAGTACTTGGTGGTAACAGGGGTAGGGATCAATGAT
ATAAATATAACAAAGAAAGCATGGATACTTCCAGGGCAATCATGGACAAAATTTGATGTT
TCACCTGTGAATTACACATTTGAAGTCCAAGCTATGAGTGCTGAAAAGCTCCCTTTTATT
CTTCCAGCTGTTTTCACAGTTGGTCCTAGACTTGATGATGAAGCTAGCCTCTTGAAATAT
GCAAAACTTATCTCTCCACATGACAAATACTCAAACCATGTCAATGATCTTGTTCAAGGT
ATCATTGAAGGAGAAACTAGAGTTCTTGCTGCATCAATGACAATGGAAGAGATATTCAAA
GGAACCAAACAGTTCAAACAAGAAGTATTCCAGAAAGTACAACTTGAACTAAACCAATTC
GGTCTCTTAATCTACAATGCCAACGTCAAACAACTCGTTGATGTTCCAGGACACGAGTAT
TTCTCCTACTTAGGTCAAAAGACTCAAATGGAAGCTGCAAACCAAGCTAAAATAGACGTG
GCGGAAGCTAGAATGAAAGGGGAGATAGGGGCAAAGCTAAGATCAGGACAAACGCTACAG
AACGCAGCTAAGATCGATGCAGAAACAAGGATTATATCAACACAAAGGGAAGGAGAAGGG
AAGAAAGAAGAGATAAAAGTGAAGACAGAAGTGAAGGTATTTGAAAACCAGAGAGAAGCA
GAAGTTGCTGAAGCAAATGCAGTGTTGGCAAAGAAGAAAGCAGGGTGGGCTAAAGAAGCA
CAAGTAGCAGAGGTGGAGGCAGAGAAAGCAGTGGCTTTAAGAGATGCTGAGTTGCAAAAG
GATGTAGAGAGGATGAATGCTTTAGCCATGACAGAGAAACTTAAGGCTGAGTTCTTGAGC
AAAGCTAGTGTTGAATATGAAACTAAGGTGCAAGAAGCAAATTGGGAGCTCTACAAGAAA
CAAAAAGAAGCAGAAGCATTTCTCTACGAAAAGGAGAAAGAAGCAGAGGCACAGAAAGCA
ACTGCAGAGGCTGATTTCTACAGACGTAAACAGATAATCGATGGCGATTTGTATGCAAAG
ATGAAGGAAGCAGAAGGACTGAAAGCTCTAGCAGAAGCTCAAGGCACATACTTGCGCACT
CTGTTAGAATCTTTGGGTGGAAACTATGGTGCTCTAAGGGATTACTTAATGATCAGTGGT
GGGATGTTTCAAGAACTTGCCAAGATTAACGGTGAAGCTATTCGAGGCCTACAACCCAAA
ATCAGCATTTGGACAAATGGAGGGTCTGAGTCAAATGCAGAAGGTGGTGGAAGTGCCCTA
AAAGAAGTTGCTGGCATCTACAAAACATTGCCACCATTGTTCAAGACTGTTCATGAACAG
ACTGGAATGATTCCACCTACATGGATGGGCACCTTGACAGATGACTCTTGTTTTCCTCAA
GAAATAATGCAATGAACAAAATGTCACACGTTTGTTATTTTGTTAAAATAAGAATACCAA
GGGAATTGATCCATTTGATAAGTGTTCAGTCAGGTCAAGAGTTTCTTTCAATTGTTGAAC
TTAATCAAGTTCAACGGCTGCGGTTTCTTTACATA