Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g065710.3.1
CDS Infomation	Sister chromatid cohesion protein PDS5 like B-B (AHRD V3.3 *** A0A0B2R5L9_GLYSO)
Sequence	ATGGCGCCTTTTGACAAAGAGCTTGAAGAGCAGATTGCTGTTGCTGGGAACAAGCTGATT GAGCCTCCTTCTTCACTTGAAGAACTCCTCCGTTTGCTTGACCAAGTAGAGTCTTCCCTG TCTAAAGTGGAGCAGTCACCAGCGAAATCAATGCATGATGCACTTTCTCCATTGATGAAG GCATTGGTTGCAAATGATCTCTTGAGGCATTCTGATGTTGATGTGAAGGTCGCAGTTGCT TCGTGTATTAGTGAGATAACTAGAATTACTGCACCAGACGCTCCATATGATGACGACAAA ATGAAGGATATCTTTCAATTAATTGTGTCGTCTTTTGAGAATCTGGATGACCAGTCTAGC AGATCTTATAATAAGAGGGTGATGATCCTTGAGACAGTGGCCAAGGTCAGGTCATGTGTT GTCATGCTGGATCTAGAATGTGATGGGCTCATCGCTGAGATGTTTCAGCACTTCCTTAAA GCTATAAGAGAGGATCACTCTGAAAATGTTTTTTCATCCATGGCAACAATCATGACTCTT GTGCTGGAAGAGAGCGAAGAAGTGTCGTTGGAATTGCTTACCCCTCTATTGGCTAGTGTT AAAAAGGACAATGCGGAGGTCACACCAGTGGCTAAAAGGTTGGGAGAGACAGTATTTGCA AACTGTGCTGCAAAGCTTAAGCCTTACTTGCCTCAAGCAGTAGAATCATTGCAAATCTCC TTAAATGAGTACAATAAGATTGTTACTTCAGTCTTGGAAGGGACTCTTCCAGCTGTTGAT GGTATTAATGACGGTGCTCCTAAGGACGAATTGGTCACTGAAGTCAAGTTGGCTGAACTT CCGGAGGCTGCTCAGGCAACTCAGGATGGTGGAAGCAAAGTGGGTCCAGCATCTTCAGGC GAAGCAGTCCAGACGGCTGAGAGCGGGAGGGATGAGGCATGTTTGGAAGATATTGAGCCT GCTGTGAATGGATCTCCCAAATCAATCACAAGCAATGGTGGTAGTTTGGAGAATGTGAGA TTGACTTCTGAAACAGAATCGCTGATGAAAGCTGGAGCTCATGATGAGGTGGATCTCCAT GATGCTTCAAAGATACCATCTGAATCTGATGATTCAAGGGTTGAAAAGTCTACAAAGTCG GAGCCCAAGTCTATGAAGTCAGAGCCCAAGTCGGAGCAACCTTCTAAGAAGAGAGGAAGG AAGACAGTCTCTTCAATAAACTCAGCCGAATCTTCTCACCAAGCTCCTGAAGGAAGTGGA AAAGAAATTGAGAAGCTTCAAGATCATCAGAATGATCAAAACAAAGATGACCATAGTTCA GCTTCTGAAGATCCAGTGGTTGAGCAGTCCAATCTGTTGGAGAAGGAACCAGAAACTAAT CAGCACTCTGCACCCAAAGAATCTGAGGAGGAAGTTGTGGATGTTGCTCCTCCATCCCAA GGTCAGAGCCTTCCTGAAGAGATTGCACTGAAGAAGGGTGATCTCCCAATGGAGGACAAC TCAAATCAAGACGGTGAGTCTAAGAAGGAAATTGAAGCTGGAAGTGACTTGGAAGTTAAG CAGGTGAGGCGCCCTTTGAGGAAGACTCCTTTAGAACCTTGTCGTAAGGAGAAAGGTGGA TCCACCAGTGATACCGAGGCTAAAAAGCTGAAGCAATCGGGTAAGAATGTTGACACCAAA AATAAGAGTCAGGTTGGTCCATCTGCGAGAAATAAGGAAGATAGCAAAAAACGTGGACAT GGAAAAGCTAGTCAGGAGACGTTGCCTTCACAAGAGTCTCCTGATCGCTCTGTTAAACAT GATGAAGATAACGAAGAGGAAATTCCCAGGACCACTACAAAGAGAAAGCGTTCTTCAAGC AAGGGCAGGGGGAGTAGGCAAGTTGTGCAGAAGAGTGTGCCTACGCCCGAGTCTCCCGAC AATTCAACTAAACATATAAGCGACGAAGATGAGACTGACACAAGTGCAAAGAAAAAGCCT TCTTCAGGCAACGACAGGGTAACAGAGACTGTGCAATGTGATAAGAATCTGGTTGGTAGA AAGATCAGAGTTTGGTGGCCATTAGATGAACTATTTTATGAAGGGACGGTTAGCAATTAT GATTCTTCCAGGAAGAAGTTCACAGTTGACTATACTGATGGAGAGACAGAAAAATTGAAT CTCTTGAAGGAACGCTGGGAACTTGTTGAAGATGATAATATGTCAGAAGAGGAGCAAGTA GCCAGCGCTGATGCAGCAGCTTCGGAAAGTCATAAGAAGAAAAAACCTAGGAATGCTGAA CCATCACTAAAGCATGAAATGGATGCTTCACCTAAAAGCAAGTCAAAAGAGGCGACAGCT AAATCTGGACAGAAATCCAAGGGTAAACTCAACTTGAAAGATGGCACCTCAAAATCTGCC GGGAAAGCTGATGACACAACCAGCAGCAAGTCTGCGGCTCCATCCAAAAGGAGCACTGGC AAATCAGTTGATACTGAAAAGCCATCTGCCAGGTCTAAAGATGTTAGTAGTAGTACTCCC AAATCCAAGTCCAGGCAAGATACTCCATCAACAACTGCCAACAAGTCCAAGCAAGAAACA GTTAAAGCTGCCAACAAGTCCAAAACCAAAACCCCCCAAAGTGGTGGCAAGTCCGGTGCC AATGGTTCGGAGAAGCTAAAATCTAGTTCATCAAAGGTTAAAGAGAGTGGGAACCAGAAG GAAAAAGCAACTAACTCAGCAAAAACCCCTGATGGCAGCACCAAGGAGAAACTGTCTAGT GCATCAAAGGAACGACAGAGTGAGCCCAAGAGTGGAAAGAAGCGTGCGAGGGGGAAAAAC TGA

Peptide Sequence

PEP ID	Solyc06g065710.3.1
PEP Infomation	Sister chromatid cohesion protein PDS5 like B-B (AHRD V3.3 *** A0A0B2R5L9_GLYSO)
Sequence	MAPFDKELEEQIAVAGNKLIEPPSSLEELLRLLDQVESSLSKVEQSPAKSMHDALSPLMK ALVANDLLRHSDVDVKVAVASCISEITRITAPDAPYDDDKMKDIFQLIVSSFENLDDQSS RSYNKRVMILETVAKVRSCVVMLDLECDGLIAEMFQHFLKAIREDHSENVFSSMATIMTL VLEESEEVSLELLTPLLASVKKDNAEVTPVAKRLGETVFANCAAKLKPYLPQAVESLQIS LNEYNKIVTSVLEGTLPAVDGINDGAPKDELVTEVKLAELPEAAQATQDGGSKVGPASSG EAVQTAESGRDEACLEDIEPAVNGSPKSITSNGGSLENVRLTSETESLMKAGAHDEVDLH DASKIPSESDDSRVEKSTKSEPKSMKSEPKSEQPSKKRGRKTVSSINSAESSHQAPEGSG KEIEKLQDHQNDQNKDDHSSASEDPVVEQSNLLEKEPETNQHSAPKESEEEVVDVAPPSQ GQSLPEEIALKKGDLPMEDNSNQDGESKKEIEAGSDLEVKQVRRPLRKTPLEPCRKEKGG STSDTEAKKLKQSGKNVDTKNKSQVGPSARNKEDSKKRGHGKASQETLPSQESPDRSVKH DEDNEEEIPRTTTKRKRSSSKGRGSRQVVQKSVPTPESPDNSTKHISDEDETDTSAKKKP SSGNDRVTETVQCDKNLVGRKIRVWWPLDELFYEGTVSNYDSSRKKFTVDYTDGETEKLN LLKERWELVEDDNMSEEEQVASADAAASESHKKKKPRNAEPSLKHEMDASPKSKSKEATA KSGQKSKGKLNLKDGTSKSAGKADDTTSSKSAAPSKRSTGKSVDTEKPSARSKDVSSSTP KSKSRQDTPSTTANKSKQETVKAANKSKTKTPQSGGKSGANGSEKLKSSSSKVKESGNQK EKATNSAKTPDGSTKEKLSSASKERQSEPKSGKKRARGKN*

Transcript Sequence

Transcript ID	Solyc06g065710.3.1
Transcript Infomation	Sister chromatid cohesion protein PDS5 like B-B (AHRD V3.3 *** A0A0B2R5L9_GLYSO)
Sequence	GAACAAAAATAAAAAAATATATAAACCGAAAAACTGGAAAAAAAAAAAAGCTCACTTGTT CTTCTAGGGTTTCACAAGATCTCTTTTGCCTCTGCAAAACACGAGCGAATTGCGATTTCT AGGGTTACGATTTGTGTTTGTTCGGGTGTTTGATGGTCCGAGGAGTGATTTGAGGGTATA AATCTTGATTTTTTCTGGAAGATTTTGAAGAGAGAAAGGAAACGATGGCGCCTTTTGACA AAGAGCTTGAAGAGCAGATTGCTGTTGCTGGGAACAAGCTGATTGAGCCTCCTTCTTCAC TTGAAGAACTCCTCCGTTTGCTTGACCAAGTAGAGTCTTCCCTGTCTAAAGTGGAGCAGT CACCAGCGAAATCAATGCATGATGCACTTTCTCCATTGATGAAGGCATTGGTTGCAAATG ATCTCTTGAGGCATTCTGATGTTGATGTGAAGGTCGCAGTTGCTTCGTGTATTAGTGAGA TAACTAGAATTACTGCACCAGACGCTCCATATGATGACGACAAAATGAAGGATATCTTTC AATTAATTGTGTCGTCTTTTGAGAATCTGGATGACCAGTCTAGCAGATCTTATAATAAGA GGGTGATGATCCTTGAGACAGTGGCCAAGGTCAGGTCATGTGTTGTCATGCTGGATCTAG AATGTGATGGGCTCATCGCTGAGATGTTTCAGCACTTCCTTAAAGCTATAAGAGAGGATC ACTCTGAAAATGTTTTTTCATCCATGGCAACAATCATGACTCTTGTGCTGGAAGAGAGCG AAGAAGTGTCGTTGGAATTGCTTACCCCTCTATTGGCTAGTGTTAAAAAGGACAATGCGG AGGTCACACCAGTGGCTAAAAGGTTGGGAGAGACAGTATTTGCAAACTGTGCTGCAAAGC TTAAGCCTTACTTGCCTCAAGCAGTAGAATCATTGCAAATCTCCTTAAATGAGTACAATA AGATTGTTACTTCAGTCTTGGAAGGGACTCTTCCAGCTGTTGATGGTATTAATGACGGTG CTCCTAAGGACGAATTGGTCACTGAAGTCAAGTTGGCTGAACTTCCGGAGGCTGCTCAGG CAACTCAGGATGGTGGAAGCAAAGTGGGTCCAGCATCTTCAGGCGAAGCAGTCCAGACGG CTGAGAGCGGGAGGGATGAGGCATGTTTGGAAGATATTGAGCCTGCTGTGAATGGATCTC CCAAATCAATCACAAGCAATGGTGGTAGTTTGGAGAATGTGAGATTGACTTCTGAAACAG AATCGCTGATGAAAGCTGGAGCTCATGATGAGGTGGATCTCCATGATGCTTCAAAGATAC CATCTGAATCTGATGATTCAAGGGTTGAAAAGTCTACAAAGTCGGAGCCCAAGTCTATGA AGTCAGAGCCCAAGTCGGAGCAACCTTCTAAGAAGAGAGGAAGGAAGACAGTCTCTTCAA TAAACTCAGCCGAATCTTCTCACCAAGCTCCTGAAGGAAGTGGAAAAGAAATTGAGAAGC TTCAAGATCATCAGAATGATCAAAACAAAGATGACCATAGTTCAGCTTCTGAAGATCCAG TGGTTGAGCAGTCCAATCTGTTGGAGAAGGAACCAGAAACTAATCAGCACTCTGCACCCA AAGAATCTGAGGAGGAAGTTGTGGATGTTGCTCCTCCATCCCAAGGTCAGAGCCTTCCTG AAGAGATTGCACTGAAGAAGGGTGATCTCCCAATGGAGGACAACTCAAATCAAGACGGTG AGTCTAAGAAGGAAATTGAAGCTGGAAGTGACTTGGAAGTTAAGCAGGTGAGGCGCCCTT TGAGGAAGACTCCTTTAGAACCTTGTCGTAAGGAGAAAGGTGGATCCACCAGTGATACCG AGGCTAAAAAGCTGAAGCAATCGGGTAAGAATGTTGACACCAAAAATAAGAGTCAGGTTG GTCCATCTGCGAGAAATAAGGAAGATAGCAAAAAACGTGGACATGGAAAAGCTAGTCAGG AGACGTTGCCTTCACAAGAGTCTCCTGATCGCTCTGTTAAACATGATGAAGATAACGAAG AGGAAATTCCCAGGACCACTACAAAGAGAAAGCGTTCTTCAAGCAAGGGCAGGGGGAGTA GGCAAGTTGTGCAGAAGAGTGTGCCTACGCCCGAGTCTCCCGACAATTCAACTAAACATA TAAGCGACGAAGATGAGACTGACACAAGTGCAAAGAAAAAGCCTTCTTCAGGCAACGACA GGGTAACAGAGACTGTGCAATGTGATAAGAATCTGGTTGGTAGAAAGATCAGAGTTTGGT GGCCATTAGATGAACTATTTTATGAAGGGACGGTTAGCAATTATGATTCTTCCAGGAAGA AGTTCACAGTTGACTATACTGATGGAGAGACAGAAAAATTGAATCTCTTGAAGGAACGCT GGGAACTTGTTGAAGATGATAATATGTCAGAAGAGGAGCAAGTAGCCAGCGCTGATGCAG CAGCTTCGGAAAGTCATAAGAAGAAAAAACCTAGGAATGCTGAACCATCACTAAAGCATG AAATGGATGCTTCACCTAAAAGCAAGTCAAAAGAGGCGACAGCTAAATCTGGACAGAAAT CCAAGGGTAAACTCAACTTGAAAGATGGCACCTCAAAATCTGCCGGGAAAGCTGATGACA CAACCAGCAGCAAGTCTGCGGCTCCATCCAAAAGGAGCACTGGCAAATCAGTTGATACTG AAAAGCCATCTGCCAGGTCTAAAGATGTTAGTAGTAGTACTCCCAAATCCAAGTCCAGGC AAGATACTCCATCAACAACTGCCAACAAGTCCAAGCAAGAAACAGTTAAAGCTGCCAACA AGTCCAAAACCAAAACCCCCCAAAGTGGTGGCAAGTCCGGTGCCAATGGTTCGGAGAAGC TAAAATCTAGTTCATCAAAGGTTAAAGAGAGTGGGAACCAGAAGGAAAAAGCAACTAACT CAGCAAAAACCCCTGATGGCAGCACCAAGGAGAAACTGTCTAGTGCATCAAAGGAACGAC AGAGTGAGCCCAAGAGTGGAAAGAAGCGTGCGAGGGGGAAAAACTGATTATTTGTTGCAC ATTGTAATAGTGGAGCTCCTCCTACTTACATTCTTGGACCCATTGCGGCTCATTGAAGAT GCTACGGTGCCTACTATTCCTTGTGTGCTATTGCTGTTTGGCAAAATCTTGAGGTGCAGC TTGCAAATGCCTGTCTTAGCCTTTTGGTTATGGTGGTGCGTGCTAGGTTTCTGGATAGTT TTTTTTTTCAGTTTAAAGCATATTGTTAGAGATGTAATTGGTTAGATTTATCATTTTGGT TGCTAGCTGTATTCACTTTTGTTACTTTTAGCCCTCTTAGCGTAGGAAGGAGATACTCTG TTGATGAGTATTTTATGGATGCGTTGGATCATAAATTACCATCTCTTCTCTTGGCTGCTG GTATTCTGAATCAGTCTACTTAAGTGATTACAGGTTGATACGTTACTTGTCTGATGGATT TAGGGAGTCTGTCTTTTGCTCATATTGTCTCCTATGGAGATGCATTGATATGGGGCCTTT TGCTTCTTACCTATTCACTTCTACTTGAACTGTTCGATGAGCGTATCAATTTCTTTTTTT TTTTGCAATTTTTGACAAATCAAGTAAATATGTTTGGAACCTATCATTTAATATAAATAA AATGATAAACTTACTATACAAATTATTATTTTCTTAAAAAGTATGTATGTTGTTAAATAA AATGATAAACTTACTATTCAAATTATTATTTGACAAGTAAATAAGAACAGATTAAATTCT ATTAGAAAAGTAGCAATTGAAGTGTTGGGTGTGCCTAAAGGTCTAGGACATTCGAACGCA TACAAATATCTAAAGAGGGAAGCTAAGAAGACAATTAATAAAGATTTTGGAGAACTAAAA GGTAATGATTTCAACAAGGTGAAGTATATTAAAAGATGATTTTTAACATGCTTTAATAGG AGCAATGAGGCCTAGGAAAGGAGGGCCTCAATGCATGATACAAATTTTAGATGCACTCTT TAGTCATGAAATTTAGGGCCTCCACACGTCAATTTTAAGTACTTGGTACACTCATTTATT TTAAAAAGTGAGATTAAAATAAAACAACTATAAGATTACCTGTATGTGTATATATATTTG TATTTCTTATCCGCCTAATTAAAGCTTATAACTAGTACTACTATTTTCCAAATTAAATCC ATTGATCCTTCACCTAATTAGAAAGTATTCTGTTGTTAAACGAAAAACAGATCACAAGTC TGAAACTCTGTTGTTGCTTCTTATAATAGACGCAACGAGTTGTTTCGA