Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g065610.3.1
CDS Infomation

Protein phosphatase 2C (AHRD V3.3 *** A0A103PU55_CYNCS)
Sequence

ATGGAAGAAAGTAAATTGATGTTTGATAATTGTAGCAGAGGAAATGAGAGCTCCAGCAAC
AGCAAACCGCCTAATCCTCTTGCTGGAGATCGCCGTTTAGTAGCTTCTGCCACCAAGAAG
GCCCTTGTTCGACACCCCTCTTTGGTGAGAACCAAGTTGTCAGATGTTCCTCTTGAACCA
AGAACAGCTACAGGTGATCATGCAGCAGAGTACCTTCCCATACTTCGCTCAGGTGCTTGG
GCTGACATTGGATCTCGGTCAAGCATGGAAGATGTTTATGTGTGTGCCGACAATTTAATG
AGCCACCATAGAACAGCTGGTTCTAATGAAGGGACTCATGCATTCTATGGGGTTTTCGAT
GGACATGGAGGAAAACATGCAGCTGACTTTGCTTGCAACCATTTACCAAGGTTTATTGCT
GAGGATGAAGACTTCCCAAGGCAGATTGATAGGGCAATTTCTTCTGCATTTTTGCAAACT
GATACTGCTTTCGCAGAAGCCTGCAACTTGGATGCTGATCTTGCTTCCGGTACCACTGCT
TTGGCAGCCCTTGTTATTGGAAGTTCGCTGGTTGTGGCAAATGCAGGAGATTGTAGAGCT
GTACTTTGTCGTCGTGGTAAAGCTATTGAGATGTCGAGAGATCACAAACCTGGTTGTTTT
GGGGAGAAAGAGCGGATTGAAGCTTCTGGAGGATATGTGTATGATGGCTACCTGAATGGA
CAACTTAACGTAGCTCGTGCTCTAGGAGATTGGCATCTGGAAGGATTAAAATCTATTGAT
GGTGGTCCACTTAGTGGAGAACCTGAAGTTATGAGTACCCGACTTACAGAAGAGGACGAG
TTTCTCATAATAGGCTGTGACGGTATATGGGATGTATTCATGAGCCAGAATGCTGTTGAC
TTTGCTCGTCGAAAGCTTCAGGAACACAATAATCCAGTGATGTGCTGCAAAGATCTCGTT
GATGAGGCTCTGAAAAGAAAGAGCGGGGACAATTTATCTGTGGTTGTGGTGTGTTTCCAA
AAGCAGCGACCTCCCGACTTGGTTGTCCCACGCGGAAGGGTGCATAGAAGCATTTCTGCA
GAAGGCTTAAAAGAGTTGCAGGGCTTTTTGGATAGCTTGAAAGATTAA

Peptide Sequence

PEP ID

Solyc06g065610.3.1
PEP Infomation

Protein phosphatase 2C (AHRD V3.3 *** A0A103PU55_CYNCS)
Sequence

MEESKLMFDNCSRGNESSSNSKPPNPLAGDRRLVASATKKALVRHPSLVRTKLSDVPLEP
RTATGDHAAEYLPILRSGAWADIGSRSSMEDVYVCADNLMSHHRTAGSNEGTHAFYGVFD
GHGGKHAADFACNHLPRFIAEDEDFPRQIDRAISSAFLQTDTAFAEACNLDADLASGTTA
LAALVIGSSLVVANAGDCRAVLCRRGKAIEMSRDHKPGCFGEKERIEASGGYVYDGYLNG
QLNVARALGDWHLEGLKSIDGGPLSGEPEVMSTRLTEEDEFLIIGCDGIWDVFMSQNAVD
FARRKLQEHNNPVMCCKDLVDEALKRKSGDNLSVVVVCFQKQRPPDLVVPRGRVHRSISA
EGLKELQGFLDSLKD*

Transcript Sequence

Transcript ID

Solyc06g065610.3.1
Transcript Infomation

Protein phosphatase 2C (AHRD V3.3 *** A0A103PU55_CYNCS)
Sequence

GAAAACCTTTTTTAGTTGTTAAAGGAATCACCGTCGTCTTGGTTGAGTCCCCACCTCAAA
AACATCGCTGAGAGCCAGAGATCCCTAAATCTCTCTGTTTCCTCCCACACCCTAAAAATC
CCTATTTTCCCGCTCCTCAAAACCCTTTACAATCCCCTTTAGTTTTAAACCCTAGATTCA
ATCAAATTTGCACGGAAGATCCCTAATTTTCTGCAAAATTTCTACATTCATTCACCTTTT
TTTTTTTGCTGTGCAGTTATGGTTGAGAATCAAAATGGAAGAAAGTAAATTGATGTTTGA
TAATTGTAGCAGAGGAAATGAGAGCTCCAGCAACAGCAAACCGCCTAATCCTCTTGCTGG
AGATCGCCGTTTAGTAGCTTCTGCCACCAAGAAGGCCCTTGTTCGACACCCCTCTTTGGT
GAGAACCAAGTTGTCAGATGTTCCTCTTGAACCAAGAACAGCTACAGGTGATCATGCAGC
AGAGTACCTTCCCATACTTCGCTCAGGTGCTTGGGCTGACATTGGATCTCGGTCAAGCAT
GGAAGATGTTTATGTGTGTGCCGACAATTTAATGAGCCACCATAGAACAGCTGGTTCTAA
TGAAGGGACTCATGCATTCTATGGGGTTTTCGATGGACATGGAGGAAAACATGCAGCTGA
CTTTGCTTGCAACCATTTACCAAGGTTTATTGCTGAGGATGAAGACTTCCCAAGGCAGAT
TGATAGGGCAATTTCTTCTGCATTTTTGCAAACTGATACTGCTTTCGCAGAAGCCTGCAA
CTTGGATGCTGATCTTGCTTCCGGTACCACTGCTTTGGCAGCCCTTGTTATTGGAAGTTC
GCTGGTTGTGGCAAATGCAGGAGATTGTAGAGCTGTACTTTGTCGTCGTGGTAAAGCTAT
TGAGATGTCGAGAGATCACAAACCTGGTTGTTTTGGGGAGAAAGAGCGGATTGAAGCTTC
TGGAGGATATGTGTATGATGGCTACCTGAATGGACAACTTAACGTAGCTCGTGCTCTAGG
AGATTGGCATCTGGAAGGATTAAAATCTATTGATGGTGGTCCACTTAGTGGAGAACCTGA
AGTTATGAGTACCCGACTTACAGAAGAGGACGAGTTTCTCATAATAGGCTGTGACGGTAT
ATGGGATGTATTCATGAGCCAGAATGCTGTTGACTTTGCTCGTCGAAAGCTTCAGGAACA
CAATAATCCAGTGATGTGCTGCAAAGATCTCGTTGATGAGGCTCTGAAAAGAAAGAGCGG
GGACAATTTATCTGTGGTTGTGGTGTGTTTCCAAAAGCAGCGACCTCCCGACTTGGTTGT
CCCACGCGGAAGGGTGCATAGAAGCATTTCTGCAGAAGGCTTAAAAGAGTTGCAGGGCTT
TTTGGATAGCTTGAAAGATTAAGATAGTAAACCATGACCTTTTTGTTTTATGATCTTTTA
GTTTTCAGTTATCCTAGGAGTTAAAAGATCTCTTCTCCCCTCTTTTCGCTGTTCTTCCCT
GCCCCTGTTGCTTCTCATTCTTGTAGTTTATGGTTAGATGACGGGAGAGATTGACCAACC
AACTGTAACATATGCGGCGCTGTTGTCAGATTAACTAACATTTTCTGTGTTTTAGGTGAT
TATGAACCTTCTTAAAAAATTCAAACTTAAGACATCATTTCCATTAATTTTTTTCATTTA
AGTCTTGCTAGCATATTATCCAACTAAGATGCAGG