Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g065510.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RS99_RICCO)
Sequence	CTTCGAACACTAAGGATACAAGAAGAGTTTTGTACTCGGACAATTCATGGTCATAAACCC CATAAAAACCTCAATCCGCCATTATCACTCTGTGGAGCAAATGCAATGAAAACTCTAAAC TCCACCCACATCCGCCGCTCCATTATCTCTCTAACCTCTCTTGTCTCACATCTCACTACC AAAAACCCTACTTTTAAGCTCTTCTCCACTCAATCATGGCTGAAATCAACGCGAGGAAAA CCCCTAATGAAATTGCCTAAGCTGAATTACCCACCCAAACAACCAACACCCCTCTTTTCA CCCCCTCCTTCAACCCACCAACCCGAAACCCCTAATTACTGCCCAACTGATTTCACCACC CTATCTGAGATTCTACGTGACCCCACCATCCCACCTGGCCCTGCTCTTGAAAATGCCTTG GATAGAGCTGGGATCGAAGTAAATGAGTGTATGTTTCTTCAACTTTTTAACCATTTTGAT TCTTCTCCTAAGCCTTTGTTTACTCTTTATCTATGGGCTGAGAAGAAAGAGTGGTTTAAG TTCTCTTTGCCCGTGTTTAATGCTGTGGTTAATGCCCTTGGCAAGGAAAGGGAATTTGAT TCTGCTTGGAATTTGATACTTGATAGACTCAATTCTACTGAAAGACCCAATCTTGGTACA TTTGCCATAATGATTAGAAGATATTCAAGGGCAGGTATGCTCTTACCAGCCATTCGAACA TATGAATTTTCTACTAATTTAGAGATACATGGTTTGGGCTTGGAAGACAACTTATTTGAG ATACTATTAGATTCTTTATGCAAAGAGGGGCATATTAGGGAAGCTTCAGATTATTTTTAT AGGCGAAAAGGAAAAGACTTAAATTGGTCGCCATCTATTCGGGTCTATAATATATTGCTA AATGGATGGTTTCGATCAAGAAAGCTGAAGAAAGCTGAGCGGTTGTGGACTGAGATGAAA AAGGAGGGCATAAAACCTAGCGTTGTAACTTATGGTACCCTTGTTGAAGGATTGTGCCGG ATGCGTAGAGTTGAGATGGCAATTGAACTAATTGATGAAATGAAAGAGGAAGGAATTCAT CCCAATGTTGTTGTCTACAATCCAGTAATTGATGCTTTAGGAGAAGCAGGACGGTTCAAG GAAGCATCAGGAATGATGGAGAGGCTGTTAGTGTTGGAATCTGGTCCAACTCTATCAACT TACAATTCGTTGGTGAAGGGCTTTTGCAAGGCAGGAGATATTGCTGGGGCAAGTAAGATT CTTAAGATGATGATAGATAGAGGTTTTATGCCAACTCCAACAACTTACAATTACTTTTTT CGGTACTTCTCCAAGTTTGGGAAGATTGAAGAAGGCTTAAACCTCTATACCAAGTTAATT GAATCTGGATACGTAGCAGATCGACTAACATACCATTTGCTGGTTAAGATGCTATGTGAG CAGGATAGATTGGATCTGGCATTGCAAATCATCCAAGAAATGAGGACAAAGGGTTTTGAT TTGGACTTGGCTACAAGTACCATGCTTATACATCTGTTCTGCAAGATGCATCAATTTGAT GAAGCTGTCGAGTGGTTTCATGACATGATTCGGAGAGGAGTAGTTCCTCAGTATCTCACA TATCAGAGACTCTGTAATGATCTCGCAAAACAAGGCATGAATGATAATGCAGAGAAACTT AGAAACATGATGGTATCTACACCCTACGCCGAGAAGTTGCCCAACACATATATTAGAGAT GGAGACACATCGCATTCAAGGAGAAAATCCATCATTGCAAAAGCTGAAGAAATGTCAAAT ATAATTCAGACGTGTAGAAGTCCAAGACAGCTAATCAAACGTAGAACTCCGCCTGAAAAT GCAGTGCTGAGTGCAAACCAGCTTATAGAAAATATTAGTGAACGAGTGGAATAG

Peptide Sequence

PEP ID	Solyc06g065510.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RS99_RICCO)
Sequence	LRTLRIQEEFCTRTIHGHKPHKNLNPPLSLCGANAMKTLNSTHIRRSIISLTSLVSHLTT KNPTFKLFSTQSWLKSTRGKPLMKLPKLNYPPKQPTPLFSPPPSTHQPETPNYCPTDFTT LSEILRDPTIPPGPALENALDRAGIEVNECMFLQLFNHFDSSPKPLFTLYLWAEKKEWFK FSLPVFNAVVNALGKEREFDSAWNLILDRLNSTERPNLGTFAIMIRRYSRAGMLLPAIRT YEFSTNLEIHGLGLEDNLFEILLDSLCKEGHIREASDYFYRRKGKDLNWSPSIRVYNILL NGWFRSRKLKKAERLWTEMKKEGIKPSVVTYGTLVEGLCRMRRVEMAIELIDEMKEEGIH PNVVVYNPVIDALGEAGRFKEASGMMERLLVLESGPTLSTYNSLVKGFCKAGDIAGASKI LKMMIDRGFMPTPTTYNYFFRYFSKFGKIEEGLNLYTKLIESGYVADRLTYHLLVKMLCE QDRLDLALQIIQEMRTKGFDLDLATSTMLIHLFCKMHQFDEAVEWFHDMIRRGVVPQYLT YQRLCNDLAKQGMNDNAEKLRNMMVSTPYAEKLPNTYIRDGDTSHSRRKSIIAKAEEMSN IIQTCRSPRQLIKRRTPPENAVLSANQLIENISERVE*

Transcript Sequence

Transcript ID	Solyc06g065510.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RS99_RICCO)
Sequence	CTTCGAACACTAAGGATACAAGAAGAGTTTTGTACTCGGACAATTCATGGTCATAAACCC CATAAAAACCTCAATCCGCCATTATCACTCTGTGGAGCAAATGCAATGAAAACTCTAAAC TCCACCCACATCCGCCGCTCCATTATCTCTCTAACCTCTCTTGTCTCACATCTCACTACC AAAAACCCTACTTTTAAGCTCTTCTCCACTCAATCATGGCTGAAATCAACGCGAGGAAAA CCCCTAATGAAATTGCCTAAGCTGAATTACCCACCCAAACAACCAACACCCCTCTTTTCA CCCCCTCCTTCAACCCACCAACCCGAAACCCCTAATTACTGCCCAACTGATTTCACCACC CTATCTGAGATTCTACGTGACCCCACCATCCCACCTGGCCCTGCTCTTGAAAATGCCTTG GATAGAGCTGGGATCGAAGTAAATGAGTGTATGTTTCTTCAACTTTTTAACCATTTTGAT TCTTCTCCTAAGCCTTTGTTTACTCTTTATCTATGGGCTGAGAAGAAAGAGTGGTTTAAG TTCTCTTTGCCCGTGTTTAATGCTGTGGTTAATGCCCTTGGCAAGGAAAGGGAATTTGAT TCTGCTTGGAATTTGATACTTGATAGACTCAATTCTACTGAAAGACCCAATCTTGGTACA TTTGCCATAATGATTAGAAGATATTCAAGGGCAGGTATGCTCTTACCAGCCATTCGAACA TATGAATTTTCTACTAATTTAGAGATACATGGTTTGGGCTTGGAAGACAACTTATTTGAG ATACTATTAGATTCTTTATGCAAAGAGGGGCATATTAGGGAAGCTTCAGATTATTTTTAT AGGCGAAAAGGAAAAGACTTAAATTGGTCGCCATCTATTCGGGTCTATAATATATTGCTA AATGGATGGTTTCGATCAAGAAAGCTGAAGAAAGCTGAGCGGTTGTGGACTGAGATGAAA AAGGAGGGCATAAAACCTAGCGTTGTAACTTATGGTACCCTTGTTGAAGGATTGTGCCGG ATGCGTAGAGTTGAGATGGCAATTGAACTAATTGATGAAATGAAAGAGGAAGGAATTCAT CCCAATGTTGTTGTCTACAATCCAGTAATTGATGCTTTAGGAGAAGCAGGACGGTTCAAG GAAGCATCAGGAATGATGGAGAGGCTGTTAGTGTTGGAATCTGGTCCAACTCTATCAACT TACAATTCGTTGGTGAAGGGCTTTTGCAAGGCAGGAGATATTGCTGGGGCAAGTAAGATT CTTAAGATGATGATAGATAGAGGTTTTATGCCAACTCCAACAACTTACAATTACTTTTTT CGGTACTTCTCCAAGTTTGGGAAGATTGAAGAAGGCTTAAACCTCTATACCAAGTTAATT GAATCTGGATACGTAGCAGATCGACTAACATACCATTTGCTGGTTAAGATGCTATGTGAG CAGGATAGATTGGATCTGGCATTGCAAATCATCCAAGAAATGAGGACAAAGGGTTTTGAT TTGGACTTGGCTACAAGTACCATGCTTATACATCTGTTCTGCAAGATGCATCAATTTGAT GAAGCTGTCGAGTGGTTTCATGACATGATTCGGAGAGGAGTAGTTCCTCAGTATCTCACA TATCAGAGACTCTGTAATGATCTCGCAAAACAAGGCATGAATGATAATGCAGAGAAACTT AGAAACATGATGGTATCTACACCCTACGCCGAGAAGTTGCCCAACACATATATTAGAGAT GGAGACACATCGCATTCAAGGAGAAAATCCATCATTGCAAAAGCTGAAGAAATGTCAAAT ATAATTCAGACGTGTAGAAGTCCAAGACAGCTAATCAAACGTAGAACTCCGCCTGAAAAT GCAGTGCTGAGTGCAAACCAGCTTATAGAAAATATTAGTGAACGAGTGGAATAGGTTTAA TCTATATGATGTTGTATGATCATTCTGTAACAGATTCAAAAGTTTTGTTCGTGTACATAA ATCCAGCACAAAAGCTCAGTTGTGCTTTTGTATCAATAGAATTCTTTCTTGTCAAAAGAA TTGATTTCTGTAGGTTTTATAAAGTTCAGAAAGCAACGAATATATGTTGGATTTTGTATC ACTATGTTTGTGCCATTCTCAGATAATCCCTCCAATAC