Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g065070.1.1
CDS Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G763_THECC)
Sequence

ATGAAAATTTCTTTGTTTTCCTTTCTTTTACTACTTCTTGTTCTCTCATCATCTTCATTG
TCAGCATTAGCTGATAATCATGAAGTATTCATCCAATGCTTATCTCATAATAACCAAACA
TATTACACACCAAATAACTCATCTTTTTCATCAATCCTTCAATTCTCCATACAAAATCTA
AGGTTCAATACATCCGAAACTCCTAAACCTCTCGTGATTGTCACCCCAGTGAGTGAATCT
GAGGTCCAACGAGTCATTCTTTGTGCTAAGAAAATTGGGATGCATGTTAGGGTTCGTAGT
GCAGGACATGATTATGAAGGCCTTTCTTATGTATCTGAGGTTCCGTTTGTTATAGTTGAC
CTTATCAACCTTAGAACAATCAATGTTGATGTCAATGATAAGAGTGCATGGGTTGAAGCT
GGATCAACTATTGGTGAACTCTACTATAGAATCGCGGAGAAAAGTAAAACCCTAGGGTTT
CCAGCTGGTGTTTGTCCAACGGTTGGTGTTGGTGGACATTTTAGCGGAGGTGGTTATGGT
ACTATGATGAGAAAATATGGCCTATCAGCTGATAACATTGTAGATGCACGATTGGTTGAC
GCGAATGGGATGATTCTTGATAGGGTTTCCATGGGGGAAGATTTATTTTGGGCAATTAGA
GGAGGTGGTGGTAATACTTTTGGACTTGTCCTTGCATGGAAAGTCAAATTGCTAGATGTT
CCTGAGAAAGTTACAGTTTTCACACTTGACAAGACATTGGAACAAAATCTCACTAAGCTT
ATTCATAAGTGGCAAAATGTTGCTCCAAGATTCCATAAAGATTTGTTCATTAGGGTCATA
ATTCGTAGAGTAGACTCAAGTGATCAAGGTGGTAACAACAAACAAACAATTGTAGCTTCA
TTCAACTCCTTATTCATTGGTGGAATCGATCGATTACTTCCCATCATGCAAGAAAATTTC
CCAGAATTAGGGTTGAGAAAAGAAGATTGCATTGAGATGAGCTGGATTCAATCTATAATG
TACTTTGCAGGGTTCCCAATACATGGATCTCTTGATGTCTTGCTAAGCAGGGTTCAACCC
ACAACGCGTTACTTCAAGGCAAAATCAGATTACGTATATCAGCCAATTCCAGAGGGAGGT
CTTGAAGGAATATGGAGATTCTTCTTTGAAGAAGAAGCTAAATCATCTTATGTGATCTTG
ACTCCTTATGGTGGGAGAATGGATGAGATTTCACCATCCGCTATACCGTTCCCCCATAGA
GCTGGAAATTTATACAAAATCCAACATTTGGTGTATTGGGATGAAGAAGGGGAAGAAGTA
GCTGAGAGGCATATAAGTTGGATAAGAAGGCTTTATTCTTACATGGCCCCTTTTGTTTCT
AAGTTTCCAAGAGCTGCTTATATCAACTATAGGGATATTGATATTGGAATGAACAACAAG
AAGGGATATACAAGCTATATGCAAGCTAAGGTTTGGGGGATAAAGTATTTCAAGAATAAT
TTTGATGGATTGGTTCATGTGAAGACTAAGGTGGATCCTACAAACTTCTTTTGGAATGAG
CAAAGCATTCCTTCACTTACTAGGGATAAAAAGAACAAAGGTGAACAATGA

Peptide Sequence

PEP ID

Solyc06g065070.1.1
PEP Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G763_THECC)
Sequence

MKISLFSFLLLLLVLSSSSLSALADNHEVFIQCLSHNNQTYYTPNNSSFSSILQFSIQNL
RFNTSETPKPLVIVTPVSESEVQRVILCAKKIGMHVRVRSAGHDYEGLSYVSEVPFVIVD
LINLRTINVDVNDKSAWVEAGSTIGELYYRIAEKSKTLGFPAGVCPTVGVGGHFSGGGYG
TMMRKYGLSADNIVDARLVDANGMILDRVSMGEDLFWAIRGGGGNTFGLVLAWKVKLLDV
PEKVTVFTLDKTLEQNLTKLIHKWQNVAPRFHKDLFIRVIIRRVDSSDQGGNNKQTIVAS
FNSLFIGGIDRLLPIMQENFPELGLRKEDCIEMSWIQSIMYFAGFPIHGSLDVLLSRVQP
TTRYFKAKSDYVYQPIPEGGLEGIWRFFFEEEAKSSYVILTPYGGRMDEISPSAIPFPHR
AGNLYKIQHLVYWDEEGEEVAERHISWIRRLYSYMAPFVSKFPRAAYINYRDIDIGMNNK
KGYTSYMQAKVWGIKYFKNNFDGLVHVKTKVDPTNFFWNEQSIPSLTRDKKNKGEQ*

Transcript Sequence

Transcript ID

Solyc06g065070.1.1
Transcript Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G763_THECC)
Sequence

ATGAAAATTTCTTTGTTTTCCTTTCTTTTACTACTTCTTGTTCTCTCATCATCTTCATTG
TCAGCATTAGCTGATAATCATGAAGTATTCATCCAATGCTTATCTCATAATAACCAAACA
TATTACACACCAAATAACTCATCTTTTTCATCAATCCTTCAATTCTCCATACAAAATCTA
AGGTTCAATACATCCGAAACTCCTAAACCTCTCGTGATTGTCACCCCAGTGAGTGAATCT
GAGGTCCAACGAGTCATTCTTTGTGCTAAGAAAATTGGGATGCATGTTAGGGTTCGTAGT
GCAGGACATGATTATGAAGGCCTTTCTTATGTATCTGAGGTTCCGTTTGTTATAGTTGAC
CTTATCAACCTTAGAACAATCAATGTTGATGTCAATGATAAGAGTGCATGGGTTGAAGCT
GGATCAACTATTGGTGAACTCTACTATAGAATCGCGGAGAAAAGTAAAACCCTAGGGTTT
CCAGCTGGTGTTTGTCCAACGGTTGGTGTTGGTGGACATTTTAGCGGAGGTGGTTATGGT
ACTATGATGAGAAAATATGGCCTATCAGCTGATAACATTGTAGATGCACGATTGGTTGAC
GCGAATGGGATGATTCTTGATAGGGTTTCCATGGGGGAAGATTTATTTTGGGCAATTAGA
GGAGGTGGTGGTAATACTTTTGGACTTGTCCTTGCATGGAAAGTCAAATTGCTAGATGTT
CCTGAGAAAGTTACAGTTTTCACACTTGACAAGACATTGGAACAAAATCTCACTAAGCTT
ATTCATAAGTGGCAAAATGTTGCTCCAAGATTCCATAAAGATTTGTTCATTAGGGTCATA
ATTCGTAGAGTAGACTCAAGTGATCAAGGTGGTAACAACAAACAAACAATTGTAGCTTCA
TTCAACTCCTTATTCATTGGTGGAATCGATCGATTACTTCCCATCATGCAAGAAAATTTC
CCAGAATTAGGGTTGAGAAAAGAAGATTGCATTGAGATGAGCTGGATTCAATCTATAATG
TACTTTGCAGGGTTCCCAATACATGGATCTCTTGATGTCTTGCTAAGCAGGGTTCAACCC
ACAACGCGTTACTTCAAGGCAAAATCAGATTACGTATATCAGCCAATTCCAGAGGGAGGT
CTTGAAGGAATATGGAGATTCTTCTTTGAAGAAGAAGCTAAATCATCTTATGTGATCTTG
ACTCCTTATGGTGGGAGAATGGATGAGATTTCACCATCCGCTATACCGTTCCCCCATAGA
GCTGGAAATTTATACAAAATCCAACATTTGGTGTATTGGGATGAAGAAGGGGAAGAAGTA
GCTGAGAGGCATATAAGTTGGATAAGAAGGCTTTATTCTTACATGGCCCCTTTTGTTTCT
AAGTTTCCAAGAGCTGCTTATATCAACTATAGGGATATTGATATTGGAATGAACAACAAG
AAGGGATATACAAGCTATATGCAAGCTAAGGTTTGGGGGATAAAGTATTTCAAGAATAAT
TTTGATGGATTGGTTCATGTGAAGACTAAGGTGGATCCTACAAACTTCTTTTGGAATGAG
CAAAGCATTCCTTCACTTACTAGGGATAAAAAGAACAAAGGTGAACAATGA