Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g064680.1.1
CDS Infomation	NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC)
Sequence	ATGGATGTTGTTGAGACTTGTGGAAAAGGAACTCTTTCTTCTGGAGAGCCTTCAAACAAA CCTAGTACTGCATCAATCTATGATGATGATGAAGTTGTGGGCTTTGAGAAAGATGCAGAA ATTATAATGAAGAAATTGATACGAGGAACAAAGGAGCGGGATCTTATCTCAATCTATGGA ATGCCCGGACTTGGTAAAACAACTTTGGCAAGGAAGGTGTACAACAATCCCTCTATTGTT AATTATTTTGAAGTTAAAGCATGGTGTGCTGTGTCACAAGCATATAATAGGAGTACGTTA TTGGTTGAGATTTTCAAACAAGCTACAAATGATAAGATCAAAATCAAAGAGGACGATGAT GTAGCTGACATGTTACGCAAGGTTCTAATAGGCAAGAGATACCTCATCGTATTAGATGAC ATTTGGGAAGTCGAGGCATGGGAAGATTTGGGAATATGTTTCCCTCAAGGTGAATGTGGA AGCAGAGTAATGGTCACAACACGAATTGAACAAGTGGCTAAGCATCTTCAGCACCACAGT CATCCTTATTCTCTTAGCTTTCTCTCATCCAAAAAGAGTTGGGAATTATTGGAGAAGAAG GTATTTCGAGGAGAGAGTTGTCCCCCCGATCTACTGGAAGCAGGGTTGCAAGTTGCCCTA CACTGTAAGGGATTACCTCTTGTGGTTGTTCTGATTGCTGGAATGATTGCAAAAATGGAT AGGGAGGCGTCCTTGTGGCTCGAGGTTGCAAATGACTTAAGTTCTCTTGCTTTAGGAGAG CAGAGTATGAAGGTAATACAATCAAGTTATGACCATTTAGAAAACCACTTAAAGCCCTGC CTTCTTTACATGGCATTGTTTCCAGAAGACCATAAGATTACAGTGGACGATCTGCTCAAG TTGTGGATGGCTGAGGAGTTTGTATTGAATGTCGAAACAGAGAACATGGAGGAAGCATCT CGAGTTTGCTTGAGTGATTTGCTTAACAGAAGCCTAATAATAATGGTCTCCGGAATGAGA TTTTATGATAATGTACAATACTGCTCACTTCATGATGTAGTGCGTGAGTTCTGCTTGAGA AAACTCACAGAAGACAAGTATATGCAGCTCACAGTTCCATACAATCCATATCAACATTTG CATTCCACAGAGTCACGGTTATGCATTTTTATTCATGATGATTTTGTTAAACAATTAGAT CATCCCGACTACCAGCTGGATAAGATTCCAAGGCTGGATTTCAAGGAAACGAACTCTTTG GAGTTCATTGCTCATCCAAAACTCAATGTGTGGAATAACCAATATTCAAATCCTTTAGAT TTAGTTCTTAAATTAAGATTTGTTCGGGTATTGGATTTGATGGATGTGGAATTGCCAGAT TCATGGGCTACTGCAATTCAATCGCTAACTGAGTTGAGATACCTTGCACTTTGTGTCAAA CAATTTGAATTGAAGTGGATATCACACCTACACAATCTCCAAACTCTGCGGCTCAAGTCA AGTGAGAAGTTACGCCTAAGGGCTGCTACTTTATGGGAAATGACCAAACTAAGGCATGTG AATATAGACTGTTTTTCCGTGGCATGGGAAGACAATGAGCAAGAAAGTTCTTCAACAAGT TTGCTAGAGAACATGAAGAGTTTTGGCACTTGCAATATACGCTTCGATAATATGAATGCA AGATTCTGGTGGAGGTTTCCGAATCTTGAAGAACTCTGCCTCAGTGTTGAAGATGTACCT GAGTTTCCTTACTTTCCGATAGTGGAAGTTCATAGTCACCTTCATTTTCTTTCTCTGGAG TTCCCTTTAATCGAATTATTTAATTCATTTGGATGGGAGAGGTTTTGTGTGTTCCCTTCA AATCTTAGGCATTTGGACCTTGACAAATGTTTCTTGACGGAAGAAATGGTTTTAAACATT GCAAGACTGAAGAAGCTTGAGAGTCTCAAATTATTTTTGGGATTTCCTTCTATGAGATCA TATTGTTGGGATGTCACAAATGTGGAGTTTCCTTCACTCAAATACTTGGGATTATTCTTT ATGAAGATAGAAGAATGGAAAGCTTCAGAGGAATCGTTTCCTGTGCTTGAGAAGCTAGTT ATAAGTGCATGGCCCGGTTTCAGGGGGATCAAGGAGATCCCCCCAAGCTTTGCGGATATT CTAACCCTAAGACGTATTGAACTGTTTGACTGCACGGACTCTCTAGGGGTTTCAGCTATG AATATGAAAAGAGAGATTGAAGAAAACACAGGATGTGACAGTCTCCAAGTTGTTATACAG AAGTAA

Peptide Sequence

PEP ID	Solyc06g064680.1.1
PEP Infomation	NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC)
Sequence	MDVVETCGKGTLSSGEPSNKPSTASIYDDDEVVGFEKDAEIIMKKLIRGTKERDLISIYG MPGLGKTTLARKVYNNPSIVNYFEVKAWCAVSQAYNRSTLLVEIFKQATNDKIKIKEDDD VADMLRKVLIGKRYLIVLDDIWEVEAWEDLGICFPQGECGSRVMVTTRIEQVAKHLQHHS HPYSLSFLSSKKSWELLEKKVFRGESCPPDLLEAGLQVALHCKGLPLVVVLIAGMIAKMD REASLWLEVANDLSSLALGEQSMKVIQSSYDHLENHLKPCLLYMALFPEDHKITVDDLLK LWMAEEFVLNVETENMEEASRVCLSDLLNRSLIIMVSGMRFYDNVQYCSLHDVVREFCLR KLTEDKYMQLTVPYNPYQHLHSTESRLCIFIHDDFVKQLDHPDYQLDKIPRLDFKETNSL EFIAHPKLNVWNNQYSNPLDLVLKLRFVRVLDLMDVELPDSWATAIQSLTELRYLALCVK QFELKWISHLHNLQTLRLKSSEKLRLRAATLWEMTKLRHVNIDCFSVAWEDNEQESSSTS LLENMKSFGTCNIRFDNMNARFWWRFPNLEELCLSVEDVPEFPYFPIVEVHSHLHFLSLE FPLIELFNSFGWERFCVFPSNLRHLDLDKCFLTEEMVLNIARLKKLESLKLFLGFPSMRS YCWDVTNVEFPSLKYLGLFFMKIEEWKASEESFPVLEKLVISAWPGFRGIKEIPPSFADI LTLRRIELFDCTDSLGVSAMNMKREIEENTGCDSLQVVIQK*

Transcript Sequence

Transcript ID	Solyc06g064680.1.1
Transcript Infomation	NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC)
Sequence	ATGGATGTTGTTGAGACTTGTGGAAAAGGAACTCTTTCTTCTGGAGAGCCTTCAAACAAA CCTAGTACTGCATCAATCTATGATGATGATGAAGTTGTGGGCTTTGAGAAAGATGCAGAA ATTATAATGAAGAAATTGATACGAGGAACAAAGGAGCGGGATCTTATCTCAATCTATGGA ATGCCCGGACTTGGTAAAACAACTTTGGCAAGGAAGGTGTACAACAATCCCTCTATTGTT AATTATTTTGAAGTTAAAGCATGGTGTGCTGTGTCACAAGCATATAATAGGAGTACGTTA TTGGTTGAGATTTTCAAACAAGCTACAAATGATAAGATCAAAATCAAAGAGGACGATGAT GTAGCTGACATGTTACGCAAGGTTCTAATAGGCAAGAGATACCTCATCGTATTAGATGAC ATTTGGGAAGTCGAGGCATGGGAAGATTTGGGAATATGTTTCCCTCAAGGTGAATGTGGA AGCAGAGTAATGGTCACAACACGAATTGAACAAGTGGCTAAGCATCTTCAGCACCACAGT CATCCTTATTCTCTTAGCTTTCTCTCATCCAAAAAGAGTTGGGAATTATTGGAGAAGAAG GTATTTCGAGGAGAGAGTTGTCCCCCCGATCTACTGGAAGCAGGGTTGCAAGTTGCCCTA CACTGTAAGGGATTACCTCTTGTGGTTGTTCTGATTGCTGGAATGATTGCAAAAATGGAT AGGGAGGCGTCCTTGTGGCTCGAGGTTGCAAATGACTTAAGTTCTCTTGCTTTAGGAGAG CAGAGTATGAAGGTAATACAATCAAGTTATGACCATTTAGAAAACCACTTAAAGCCCTGC CTTCTTTACATGGCATTGTTTCCAGAAGACCATAAGATTACAGTGGACGATCTGCTCAAG TTGTGGATGGCTGAGGAGTTTGTATTGAATGTCGAAACAGAGAACATGGAGGAAGCATCT CGAGTTTGCTTGAGTGATTTGCTTAACAGAAGCCTAATAATAATGGTCTCCGGAATGAGA TTTTATGATAATGTACAATACTGCTCACTTCATGATGTAGTGCGTGAGTTCTGCTTGAGA AAACTCACAGAAGACAAGTATATGCAGCTCACAGTTCCATACAATCCATATCAACATTTG CATTCCACAGAGTCACGGTTATGCATTTTTATTCATGATGATTTTGTTAAACAATTAGAT CATCCCGACTACCAGCTGGATAAGATTCCAAGGCTGGATTTCAAGGAAACGAACTCTTTG GAGTTCATTGCTCATCCAAAACTCAATGTGTGGAATAACCAATATTCAAATCCTTTAGAT TTAGTTCTTAAATTAAGATTTGTTCGGGTATTGGATTTGATGGATGTGGAATTGCCAGAT TCATGGGCTACTGCAATTCAATCGCTAACTGAGTTGAGATACCTTGCACTTTGTGTCAAA CAATTTGAATTGAAGTGGATATCACACCTACACAATCTCCAAACTCTGCGGCTCAAGTCA AGTGAGAAGTTACGCCTAAGGGCTGCTACTTTATGGGAAATGACCAAACTAAGGCATGTG AATATAGACTGTTTTTCCGTGGCATGGGAAGACAATGAGCAAGAAAGTTCTTCAACAAGT TTGCTAGAGAACATGAAGAGTTTTGGCACTTGCAATATACGCTTCGATAATATGAATGCA AGATTCTGGTGGAGGTTTCCGAATCTTGAAGAACTCTGCCTCAGTGTTGAAGATGTACCT GAGTTTCCTTACTTTCCGATAGTGGAAGTTCATAGTCACCTTCATTTTCTTTCTCTGGAG TTCCCTTTAATCGAATTATTTAATTCATTTGGATGGGAGAGGTTTTGTGTGTTCCCTTCA AATCTTAGGCATTTGGACCTTGACAAATGTTTCTTGACGGAAGAAATGGTTTTAAACATT GCAAGACTGAAGAAGCTTGAGAGTCTCAAATTATTTTTGGGATTTCCTTCTATGAGATCA TATTGTTGGGATGTCACAAATGTGGAGTTTCCTTCACTCAAATACTTGGGATTATTCTTT ATGAAGATAGAAGAATGGAAAGCTTCAGAGGAATCGTTTCCTGTGCTTGAGAAGCTAGTT ATAAGTGCATGGCCCGGTTTCAGGGGGATCAAGGAGATCCCCCCAAGCTTTGCGGATATT CTAACCCTAAGACGTATTGAACTGTTTGACTGCACGGACTCTCTAGGGGTTTCAGCTATG AATATGAAAAGAGAGATTGAAGAAAACACAGGATGTGACAGTCTCCAAGTTGTTATACAG AAGTAA