Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g063360.4.1
CDS Infomation	chlorophyll a-b binding protein Cab9
Sequence	ATGATGATGATGATAAGTCCGTGCACTTTCCTTTGTTGGATCATCCTTACAAGCTCCTTC AATATTGATGTGGTGCTTTCGAAAACAGATTCCCAGCAAGTTTCAGCCCTCAATGACATG TATCAGTATTTGAAGCCCCATTCCAAACTTGATGGATGGAAATCCAATGGAGGAAATCCT TGTGATGATTCTTGGACGGGTGTCAAGTGTTCCGGTTCAGATGTCACTGAAATTAATCTA TCTGGCTTGGGGCTCACTGGATCACTTGGCTTCCAGCTTGATAAGTTGGACAAAGTTACC TACTTTGATGTGAGCAAAAACAACCTAAAGGACAACATACCATACCAACTTCCTCCTCGC ACACAACACCTAGATCTTTCTGGAAATCAATTTGGTGGAACTGTACCTTATTCAATTTCT CAGATGACTGAGCTTAAATCTATGAATCTTAATCATAATAAGCTAAGTGGATCACTGAGT GATTTATTTGGAAAACTTACAAAACTTACTGAGATGGATATCTCCTACAATTCAATATCA GGCAGTTTGCCTCAGAGTCTTAAATCCCTCTCAAGCCTCAGCAAATTGCATATACAGAAC AATCAGTTTACTGGATCAATAAATGTTCTTGCGGATCTTGAACTTGACGATTTGAATGTA GCAAACAACCAATTTAATGGATGGATTCCGAATGAGCTGAAAGACATCAAAAAATTAGAG ACTGGCGGAAATAGTTGGTCTACTGGATCAGCTCCTCCTCCACCTCCTGGGCAGAAAGCT AAACCACACACCAGGAACTCAGATAAGGAATCTGGAAAATCTGGCCTGGGTATAGGGGCC ATTGCAGGGATATTATTGGGTGTTTTGTTGCTACTTAGTGTTATAATTGCTCTATTGTCA AGGAAAAAAAGATCATCATCTTCCTCCCATTTTATTGAAGAAGATAAATTTAGCCGACGT CAAACTTTTACTCCTCTTGCATCTCAGGAGTTATCTAGTAGCGTACGTGCCAACATGCAG GAGGACTTCAGAGTTGCAGAGAAACATTTGCAAACCTCTTCCTCAATGGTTCTTAAGCGT CTTAATTCAGAGCGTCACAAGTCTTTTAATGAGAAGGAGATGAAAAATGTTCCACCTTCA GATCATGTCAAGTCGGCCAATGATAAAGAATTCGCAAATCCTATGAAACAGAACAGTTCA GTTAAGTTAGATCATTATCCTTTAGTTGATTTGCAAAATGCAACCAGTAACTTTGCAAGT TCTCGCCTTCTTGGTGAGGGATCAATTGGTCGAGTATACATGGCAAAATATCCGGATGGC AAGGTTCTGGCGGTAAAGAAAATAGACTCCTCCTTTTTCCGAGATGGGCAGTGCACAGAA TTCACAGAAATTGTTGGCAATATGTCCAAACTTCACCACACAAATATAGCTGAAGTTATT GGTTATTGTTCAGAGCAGGGACATAATATGTTAATCTTTGAGTATTTTAGAAATGGTTCA CTTTATGAATTCCTTCATGTGTCAGATGACTTCAGCAAACCTCTTACATGGAACACAAGA GTCAGAATTGCTCTAGGGGTCGCCCGTGCTCTTGAGTACCTGCATGAGGTTTGTTCTCCA TCATGTCTCCACGGCAATATAAGAACTTCAAACATTGTGCTCGATGCTGAATTGAATTCT CGTCTCTGTGAGTGTGGCATGGCAATGTTTCATCAGCGATCAAGCAAAAACTTGGATGCT GGATACACTGCTCCAGAATGCACAAAACCTTCTGCATTTACTTTGAAGAGTGATGTTTAT AGCTTCGGAGTTGTCATGTTGGAACTGTTGACAGGGCGAAAGCCTTTTGACAGTTCAAAG CCAAGATTAGAACAGTGTCTGGCCGAATGGGCATCGCCACAACTACATGATCTAGATGCC TTAGAGCAAATGGCTGATCCTGCTCTGCGTGGACTTTATCCTCCTAAATCTCTCTCTAGA TTTGCCAATGTGACTGCTCTGTGCGTTCAGCCGGAGCCAGAATTTCGACCACAAATGTCT GAGGTGGTCCGTTTAGTACAAAAGTCGAATATGAGCCAGAGAGGTGATGATGATGATTAC TGA

Peptide Sequence

PEP ID	Solyc06g063360.4.1
PEP Infomation	chlorophyll a-b binding protein Cab9
Sequence	MMMMISPCTFLCWIILTSSFNIDVVLSKTDSQQVSALNDMYQYLKPHSKLDGWKSNGGNP CDDSWTGVKCSGSDVTEINLSGLGLTGSLGFQLDKLDKVTYFDVSKNNLKDNIPYQLPPR TQHLDLSGNQFGGTVPYSISQMTELKSMNLNHNKLSGSLSDLFGKLTKLTEMDISYNSIS GSLPQSLKSLSSLSKLHIQNNQFTGSINVLADLELDDLNVANNQFNGWIPNELKDIKKLE TGGNSWSTGSAPPPPPGQKAKPHTRNSDKESGKSGLGIGAIAGILLGVLLLLSVIIALLS RKKRSSSSSHFIEEDKFSRRQTFTPLASQELSSSVRANMQEDFRVAEKHLQTSSSMVLKR LNSERHKSFNEKEMKNVPPSDHVKSANDKEFANPMKQNSSVKLDHYPLVDLQNATSNFAS SRLLGEGSIGRVYMAKYPDGKVLAVKKIDSSFFRDGQCTEFTEIVGNMSKLHHTNIAEVI GYCSEQGHNMLIFEYFRNGSLYEFLHVSDDFSKPLTWNTRVRIALGVARALEYLHEVCSP SCLHGNIRTSNIVLDAELNSRLCECGMAMFHQRSSKNLDAGYTAPECTKPSAFTLKSDVY SFGVVMLELLTGRKPFDSSKPRLEQCLAEWASPQLHDLDALEQMADPALRGLYPPKSLSR FANVTALCVQPEPEFRPQMSEVVRLVQKSNMSQRGDDDDY*

Transcript Sequence

Transcript ID	Solyc06g063360.4.1
Transcript Infomation	chlorophyll a-b binding protein Cab9
Sequence	CAATGTATTCTTTCGAGAGTCTACAAACAATTTTCTCTTAATAATTTTGATCCTACAGTT TCCCTTCGAGATATCATCACCCTTCGCGCAGAGGCCGATTGGGGAATGTTCTCAACTTGC TCTTCGCGTAGGGAAGCAATGTACAGACTTGGAATCATCACCCTACTCAAATTCCGTGTA GTAGTACTAATTTACTGATTTTCATAATACTGCTGTTTTTGTTGTTGTTTGACAAAGTAT TTTAGGTTTTGGGCAATTGATCGCCCAAATATGATGATGATGATAAGTCCGTGCACTTTC CTTTGTTGGATCATCCTTACAAGCTCCTTCAATATTGATGTGGTGCTTTCGAAAACAGAT TCCCAGCAAGTTTCAGCCCTCAATGACATGTATCAGTATTTGAAGCCCCATTCCAAACTT GATGGATGGAAATCCAATGGAGGAAATCCTTGTGATGATTCTTGGACGGGTGTCAAGTGT TCCGGTTCAGATGTCACTGAAATTAATCTATCTGGCTTGGGGCTCACTGGATCACTTGGC TTCCAGCTTGATAAGTTGGACAAAGTTACCTACTTTGATGTGAGCAAAAACAACCTAAAG GACAACATACCATACCAACTTCCTCCTCGCACACAACACCTAGATCTTTCTGGAAATCAA TTTGGTGGAACTGTACCTTATTCAATTTCTCAGATGACTGAGCTTAAATCTATGAATCTT AATCATAATAAGCTAAGTGGATCACTGAGTGATTTATTTGGAAAACTTACAAAACTTACT GAGATGGATATCTCCTACAATTCAATATCAGGCAGTTTGCCTCAGAGTCTTAAATCCCTC TCAAGCCTCAGCAAATTGCATATACAGAACAATCAGTTTACTGGATCAATAAATGTTCTT GCGGATCTTGAACTTGACGATTTGAATGTAGCAAACAACCAATTTAATGGATGGATTCCG AATGAGCTGAAAGACATCAAAAAATTAGAGACTGGCGGAAATAGTTGGTCTACTGGATCA GCTCCTCCTCCACCTCCTGGGCAGAAAGCTAAACCACACACCAGGAACTCAGATAAGGAA TCTGGAAAATCTGGCCTGGGTATAGGGGCCATTGCAGGGATATTATTGGGTGTTTTGTTG CTACTTAGTGTTATAATTGCTCTATTGTCAAGGAAAAAAAGATCATCATCTTCCTCCCAT TTTATTGAAGAAGATAAATTTAGCCGACGTCAAACTTTTACTCCTCTTGCATCTCAGGAG TTATCTAGTAGCGTACGTGCCAACATGCAGGAGGACTTCAGAGTTGCAGAGAAACATTTG CAAACCTCTTCCTCAATGGTTCTTAAGCGTCTTAATTCAGAGCGTCACAAGTCTTTTAAT GAGAAGGAGATGAAAAATGTTCCACCTTCAGATCATGTCAAGTCGGCCAATGATAAAGAA TTCGCAAATCCTATGAAACAGAACAGTTCAGTTAAGTTAGATCATTATCCTTTAGTTGAT TTGCAAAATGCAACCAGTAACTTTGCAAGTTCTCGCCTTCTTGGTGAGGGATCAATTGGT CGAGTATACATGGCAAAATATCCGGATGGCAAGGTTCTGGCGGTAAAGAAAATAGACTCC TCCTTTTTCCGAGATGGGCAGTGCACAGAATTCACAGAAATTGTTGGCAATATGTCCAAA CTTCACCACACAAATATAGCTGAAGTTATTGGTTATTGTTCAGAGCAGGGACATAATATG TTAATCTTTGAGTATTTTAGAAATGGTTCACTTTATGAATTCCTTCATGTGTCAGATGAC TTCAGCAAACCTCTTACATGGAACACAAGAGTCAGAATTGCTCTAGGGGTCGCCCGTGCT CTTGAGTACCTGCATGAGGTTTGTTCTCCATCATGTCTCCACGGCAATATAAGAACTTCA AACATTGTGCTCGATGCTGAATTGAATTCTCGTCTCTGTGAGTGTGGCATGGCAATGTTT CATCAGCGATCAAGCAAAAACTTGGATGCTGGATACACTGCTCCAGAATGCACAAAACCT TCTGCATTTACTTTGAAGAGTGATGTTTATAGCTTCGGAGTTGTCATGTTGGAACTGTTG ACAGGGCGAAAGCCTTTTGACAGTTCAAAGCCAAGATTAGAACAGTGTCTGGCCGAATGG GCATCGCCACAACTACATGATCTAGATGCCTTAGAGCAAATGGCTGATCCTGCTCTGCGT GGACTTTATCCTCCTAAATCTCTCTCTAGATTTGCCAATGTGACTGCTCTGTGCGTTCAG CCGGAGCCAGAATTTCGACCACAAATGTCTGAGGTGGTCCGTTTAGTACAAAAGTCGAAT ATGAGCCAGAGAGGTGATGATGATGATTACTGATATATACTTTCAGGTTCTCGGAGGAAA AAAAAGGAAGAAAATCTTTTCAGACTTGAGAAGACGGGACTCCCATTTTTTTTCTTACTT CATCTTCTCCTTTTAGAAAATCAAGTGTTTTTGGGTAGTGCAAACGCTTTCCAGTACTTT GAAGTCTAGTTGAAAGCAATGATCTGTTTGTCATGGCATATCACGCCAATAGCAGTCTCT TCTCTTGTTGATAACTTCATATCCCCATTCCATTTTATGTGGCTGGATTTGAAGTACAAG GATCAAGCTCGTTAATTCTGTGTGAATTTGGAC