Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g063340.3.1
CDS Infomation

DUF1666 family protein (DUF1666) (AHRD V3.3 *** AT3G20260.1)
Sequence

ATGGATTTCTTCAAAGTGAAGAGGTTTAGAAAGGCTCATAAGCCGGAACTAGAGAATAAT
ACAGAGGAAAAACCTGTTCCGCTGCCGGGAGAGCAAAAGAATGAGAATGGTAATGTGGGG
AAAACAACTTATGTTGATTCCACTAATGCTGAACCAGAAGATGATGATGATGACTTCATC
ACTAATGAAGTAAAGAGGAGGTTGAAGGAACTGAGAAGAAACAGCTTTATGGTATTAATT
CCTGAAGAGTCAGCTCCAGAAGATGATGATGCAGATGATGAAGAAGAACAGGTGAACATG
AATCCCAGTGATTGGAGAGATGTTGAAGCTGAAGGACGACAGTTTTGGTCTGGCTTCAAT
GCCGTGTATGACAAATACGCTGAACAAATGCTGTTTTATGACCGCCTGCATGTTCAGCAG
CTGCGTGAAATTGGTTCACATATTCCATCTACTTCTTCTCCAAGATCTGCACCTAAAAAG
CTTGTATCACCCTTTCGGTGCCTATCCTTGAAAAAAATGGATGAATTTCAAGATGAAACT
CAGCACTTGCACCAGCCTGTGGCTGACATTAATCAAGATCTTGAAACAGCTTATGTAGCT
CAGTTGTGCTTGACCTGGGAAGTTCTTCACTGTCAATACACACAATTGAGTCAGAAAATC
TCTAGCCAACCTGATAGTCCCATCTTCTATAATCACAGCGCTCAGCAGTTTCAGCAGTTA
TTGGTCTTGTTACAACGATTTATTGAAACTGAACCTTTTGAACCGGGTACGAGGCCTGAA
ATTTATGCTCGCATGAGACATGCATTGCCTATGCTACTTCAGGTTCCTAAAGTCCAAGGT
TCTGATCAAAAGAAATTGGAAGATGATGAGTTGCCAGTTCTTGCTCCAGATCTACTTAAA
GTGATTGAAAGTTCAATCCTCACTTTTCGTGTATTTGTGAAGATGGACAAGAAGTCTAGC
AGTGTACGTAATCTTTTCGGAAGCCAGAACCAGATGACAACACCTGTTCATCAGGTTCAA
TGTTCTCTTGAAAAGAAAAAGGTGAAACTGAAGGAACTACGGAAGAAAACAAAGAACCTG
AAGAAGAAATCATGGCCTAGCATGGCAGCAGATGTGGACCTGTTGCTTGGCCTAATTGAT
GTGAAAGTCATGAATAGGGTCCTAAGAATGGAAAGAATCAGTAAGGAACAGTTATTCTGG
TGCGAAGAAAAGATGAAGAAGCTAGATGTAACTGACGGCAAGCTGCAGAGAGACCCCTCT
CTTATCTTATTTCCTGGTTAG

Peptide Sequence

PEP ID

Solyc06g063340.3.1
PEP Infomation

DUF1666 family protein (DUF1666) (AHRD V3.3 *** AT3G20260.1)
Sequence

MDFFKVKRFRKAHKPELENNTEEKPVPLPGEQKNENGNVGKTTYVDSTNAEPEDDDDDFI
TNEVKRRLKELRRNSFMVLIPEESAPEDDDADDEEEQVNMNPSDWRDVEAEGRQFWSGFN
AVYDKYAEQMLFYDRLHVQQLREIGSHIPSTSSPRSAPKKLVSPFRCLSLKKMDEFQDET
QHLHQPVADINQDLETAYVAQLCLTWEVLHCQYTQLSQKISSQPDSPIFYNHSAQQFQQL
LVLLQRFIETEPFEPGTRPEIYARMRHALPMLLQVPKVQGSDQKKLEDDELPVLAPDLLK
VIESSILTFRVFVKMDKKSSSVRNLFGSQNQMTTPVHQVQCSLEKKKVKLKELRKKTKNL
KKKSWPSMAADVDLLLGLIDVKVMNRVLRMERISKEQLFWCEEKMKKLDVTDGKLQRDPS
LILFPG*

Transcript Sequence

Transcript ID

Solyc06g063340.3.1
Transcript Infomation

DUF1666 family protein (DUF1666) (AHRD V3.3 *** AT3G20260.1)
Sequence

CCATGAACGTCTCCAAATACGAGGGAAGGGGGGTGTAGAAAATAAAAGAAGAAGAAAAGG
TGGTCAAATCTAGCATTACTCTCAACTATGGGGCGTATTACGTAAATTTAATTCAAAGTC
AAGTCAAAACTTTTTCTTCATTTTCGCGGCTTTTTGGGTAATAAACTTCTGACAATATTC
TCTGTACGAAAAACCCTTAACCCCATGCACTCTGTTTCCTCTAGGAAATCGCAAACCATT
TTTTTATTTTAACTTTACTTAAATCTCATTTCGTCTACATCTTCATTAAATCTTCTTCCG
TTACTGTTCCTACTGTCCAAAACTTGAATCAAAATTTTGCCTTTTTGTTCTTTTATCACC
TTTTTTTGTCCCTCTACTTGTGTAATTTTTCTTTTTTATTTCTCAGCATCGTAACGCGTA
ATGTGTTTTTCTTGTTATTCAGATTCATATATGTCACACTAAATGTAATGTATCAGTAAA
AAACTGTACCCATTCAACTCACTCACCCATTGTTTTTGTTGCTCTTTTTTTTTGAACCCC
TTTATAATATCCCGCCTCGATTCGGTTTCTAGGGTTTGTACTCTTCTTAACAAATGGCTT
GGGTGGGTGTACACCGGTTTAATCTAAGCTGAATGTCGTTGGGGTTTTATTGGGGATTTC
ACATTGGATGCTTGATGATGGTGTGGAAGCTGAGGACATACAGATTCAGAATGGGGCTAA
ATTAGATTATGGATCTGATTTGAGTTGTCAGAGTTTTGGTGGAAGGGACTGCGAAACTAA
AGGTGGCATTTTTGTTATGTATTGTTTGTTTGAATGATTCTTTTTTACTGCATGTAGACT
GGAGCTCTTTTGCATCCTGGTGTTGTTGAGAAGAGCAAATCAATCTTTTTGAGGTTAACT
AAGTGGGGTTTCTAATTTAAGTGGACGAACGAAAATTATTATTGTGTAAGACATTGATAG
GAAAGTTGTTGGTTTAAGTGATGGATTTCTTCAAAGTGAAGAGGTTTAGAAAGGCTCATA
AGCCGGAACTAGAGAATAATACAGAGGAAAAACCTGTTCCGCTGCCGGGAGAGCAAAAGA
ATGAGAATGGTAATGTGGGGAAAACAACTTATGTTGATTCCACTAATGCTGAACCAGAAG
ATGATGATGATGACTTCATCACTAATGAAGTAAAGAGGAGGTTGAAGGAACTGAGAAGAA
ACAGCTTTATGGTATTAATTCCTGAAGAGTCAGCTCCAGAAGATGATGATGCAGATGATG
AAGAAGAACAGGTGAACATGAATCCCAGTGATTGGAGAGATGTTGAAGCTGAAGGACGAC
AGTTTTGGTCTGGCTTCAATGCCGTGTATGACAAATACGCTGAACAAATGCTGTTTTATG
ACCGCCTGCATGTTCAGCAGCTGCGTGAAATTGGTTCACATATTCCATCTACTTCTTCTC
CAAGATCTGCACCTAAAAAGCTTGTATCACCCTTTCGGTGCCTATCCTTGAAAAAAATGG
ATGAATTTCAAGATGAAACTCAGCACTTGCACCAGCCTGTGGCTGACATTAATCAAGATC
TTGAAACAGCTTATGTAGCTCAGTTGTGCTTGACCTGGGAAGTTCTTCACTGTCAATACA
CACAATTGAGTCAGAAAATCTCTAGCCAACCTGATAGTCCCATCTTCTATAATCACAGCG
CTCAGCAGTTTCAGCAGTTATTGGTCTTGTTACAACGATTTATTGAAACTGAACCTTTTG
AACCGGGTACGAGGCCTGAAATTTATGCTCGCATGAGACATGCATTGCCTATGCTACTTC
AGGTTCCTAAAGTCCAAGGTTCTGATCAAAAGAAATTGGAAGATGATGAGTTGCCAGTTC
TTGCTCCAGATCTACTTAAAGTGATTGAAAGTTCAATCCTCACTTTTCGTGTATTTGTGA
AGATGGACAAGAAGTCTAGCAGTGTACGTAATCTTTTCGGAAGCCAGAACCAGATGACAA
CACCTGTTCATCAGGTTCAATGTTCTCTTGAAAAGAAAAAGGTGAAACTGAAGGAACTAC
GGAAGAAAACAAAGAACCTGAAGAAGAAATCATGGCCTAGCATGGCAGCAGATGTGGACC
TGTTGCTTGGCCTAATTGATGTGAAAGTCATGAATAGGGTCCTAAGAATGGAAAGAATCA
GTAAGGAACAGTTATTCTGGTGCGAAGAAAAGATGAAGAAGCTAGATGTAACTGACGGCA
AGCTGCAGAGAGACCCCTCTCTTATCTTATTTCCTGGTTAGCAGGCAAATCGAAACTCTT
GACTTGCTAGAAAAACCAATATTTTTTTTCCTTCTGTATTGGCTGTATAATAGGGTGGAT
ATTCTTCATCAACTGTTTGATCT