Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g063250.3.1
CDS Infomation	Metal tolerance protein C4 (AHRD V3.3 *** X5D917_TOBAC)
Sequence	ATGCCTACCCGTGGTGTTCTCTCTGCTCTTCGCTGCTATCGTCATCGTTATCAAGGATCT TATTCCCTCTCTGCAGCTCTCGATAAATTTGACTTTGGCGCTTTTCACACTTGCTCATCC GAAATCAAAGAAGAAACTAAACCTCATTTCGATGCTTATCATAGATTTCAATGCAATCCA TATTCAAATTTCAGTGGAGGTCAGGGGCCTTCATTCGCATTGCGCAGTATATTCTCGGTT AATTCTTCGCTAAATGTGGTATCGTCTTCAATTTCCAGAAATAGTAGTCACCTGTTCCTC AGCCGCGGGTTGATTACCAGACCAAAGAAGTTAAAGACAATAGAAGTGGTGGATGATCCT GGCCAGCGAGCAGTCACAACAGCTTTATGGTGCAATTTTCTTGTTTTTTCCCTGAAGTTT GGGGTCTGGTTTGTCAGTTCCAGCCATGTCATGCTGGCTGAAGTTGTGCATTCAGTTGCG GATTTCGCAAATCAGGCGCTTCTTGCTTATGGTTTAAGTAGCTCCAGACGTGCACCAGAT GCTATCCACCCATACGGCTACTCCAAGGAAAGATTTGTCTGGTCTTTGATATCTGCTGTT GGTATCTTTTGTCTTGGCTGTGGTGCTACTATAGTTCACGGAGTACAAAACTTGTGGACT ACTGAGCAACCTACAAATATTGGATATGCAGCACTGGTGATTGGTGGCTCATTCATTATA GAGGGTATTTCTCTCGTTGTGGCTATTCAATCTGTCAGAAAAGGAGCTGCTGCTGAAGGA ATGACAGTGAGAGATTACATTTGGCGTGGTCATGATCCTACAGCTGTAGCTGTCATGACA GAGGATGGTGCTGCTGTTACAGGTCTAGCCATTGCTGCCGCATCATTGGTTGCTGTAAAT GCCACTGGAAATCCAATTTATGATCCCATTGGTTCGATTATAGTGGGCAATCTTCTAGGA ATGGTTGCTATATTTCTGATTCAGAGAAATCGACATGCTTTGATTGGTAGAGCAATTGAT GACAATGACATGGACAGGGTTCTTCAGTTCCTGAAAAATGATCCAGTTGTTGATTCCATT TATGATTGCAAAAGTGAGGTGATTGGGCCTGGGTTCTTTAGGTTTAAGGCTGAGATAGAC TTCAATGGCGTAGTGCTGGTTCAAAATTATCTAGAGAGAGCTGGACGTGAAGAGTGGGCT AAACAGTTTCGAGAGGCTTCAGAGCAGAAGGATGATGCAGCTTTACTGAAAATGATGTCA ATCTACGGTGAGGAAGTTGTCACAGCACTAGGGAGTGAAGTTGATAGGCTAGAAAAAGAA ATCCAGGAAATAGTTCCAGGCATTAGGCATGTGGACATTGAAGCCCATAATCCAATTGTG CCAACCCCATGA

Peptide Sequence

PEP ID	Solyc06g063250.3.1
PEP Infomation	Metal tolerance protein C4 (AHRD V3.3 *** X5D917_TOBAC)
Sequence	MPTRGVLSALRCYRHRYQGSYSLSAALDKFDFGAFHTCSSEIKEETKPHFDAYHRFQCNP YSNFSGGQGPSFALRSIFSVNSSLNVVSSSISRNSSHLFLSRGLITRPKKLKTIEVVDDP GQRAVTTALWCNFLVFSLKFGVWFVSSSHVMLAEVVHSVADFANQALLAYGLSSSRRAPD AIHPYGYSKERFVWSLISAVGIFCLGCGATIVHGVQNLWTTEQPTNIGYAALVIGGSFII EGISLVVAIQSVRKGAAAEGMTVRDYIWRGHDPTAVAVMTEDGAAVTGLAIAAASLVAVN ATGNPIYDPIGSIIVGNLLGMVAIFLIQRNRHALIGRAIDDNDMDRVLQFLKNDPVVDSI YDCKSEVIGPGFFRFKAEIDFNGVVLVQNYLERAGREEWAKQFREASEQKDDAALLKMMS IYGEEVVTALGSEVDRLEKEIQEIVPGIRHVDIEAHNPIVPTP*

Transcript Sequence

Transcript ID	Solyc06g063250.3.1
Transcript Infomation	Metal tolerance protein C4 (AHRD V3.3 *** X5D917_TOBAC)
Sequence	GACTATGCTTCTTCTTTACCCATGGAGAATCTCTTGAGGGGATTTCCGATTCCACCATTG ATGCTCCATTTTTCGGCAATGAGTTTTGGAGCTCACTTTCACTATAGAACCTCAAAACCC TAAAGCCTTAGTGAAGTGCTGAAACTACTTTTGCTGGAGCATATAATCCTTTGTTTGCCT TGGTGAAGTGCCGAAACTAGTTTTTGCTGGAGTATATAATCCTTTGTTTATCACGCATTG ATGCCTACCCGTGGTGTTCTCTCTGCTCTTCGCTGCTATCGTCATCGTTATCAAGGATCT TATTCCCTCTCTGCAGCTCTCGATAAATTTGACTTTGGCGCTTTTCACACTTGCTCATCC GAAATCAAAGAAGAAACTAAACCTCATTTCGATGCTTATCATAGATTTCAATGCAATCCA TATTCAAATTTCAGTGGAGGTCAGGGGCCTTCATTCGCATTGCGCAGTATATTCTCGGTT AATTCTTCGCTAAATGTGGTATCGTCTTCAATTTCCAGAAATAGTAGTCACCTGTTCCTC AGCCGCGGGTTGATTACCAGACCAAAGAAGTTAAAGACAATAGAAGTGGTGGATGATCCT GGCCAGCGAGCAGTCACAACAGCTTTATGGTGCAATTTTCTTGTTTTTTCCCTGAAGTTT GGGGTCTGGTTTGTCAGTTCCAGCCATGTCATGCTGGCTGAAGTTGTGCATTCAGTTGCG GATTTCGCAAATCAGGCGCTTCTTGCTTATGGTTTAAGTAGCTCCAGACGTGCACCAGAT GCTATCCACCCATACGGCTACTCCAAGGAAAGATTTGTCTGGTCTTTGATATCTGCTGTT GGTATCTTTTGTCTTGGCTGTGGTGCTACTATAGTTCACGGAGTACAAAACTTGTGGACT ACTGAGCAACCTACAAATATTGGATATGCAGCACTGGTGATTGGTGGCTCATTCATTATA GAGGGTATTTCTCTCGTTGTGGCTATTCAATCTGTCAGAAAAGGAGCTGCTGCTGAAGGA ATGACAGTGAGAGATTACATTTGGCGTGGTCATGATCCTACAGCTGTAGCTGTCATGACA GAGGATGGTGCTGCTGTTACAGGTCTAGCCATTGCTGCCGCATCATTGGTTGCTGTAAAT GCCACTGGAAATCCAATTTATGATCCCATTGGTTCGATTATAGTGGGCAATCTTCTAGGA ATGGTTGCTATATTTCTGATTCAGAGAAATCGACATGCTTTGATTGGTAGAGCAATTGAT GACAATGACATGGACAGGGTTCTTCAGTTCCTGAAAAATGATCCAGTTGTTGATTCCATT TATGATTGCAAAAGTGAGGTGATTGGGCCTGGGTTCTTTAGGTTTAAGGCTGAGATAGAC TTCAATGGCGTAGTGCTGGTTCAAAATTATCTAGAGAGAGCTGGACGTGAAGAGTGGGCT AAACAGTTTCGAGAGGCTTCAGAGCAGAAGGATGATGCAGCTTTACTGAAAATGATGTCA ATCTACGGTGAGGAAGTTGTCACAGCACTAGGGAGTGAAGTTGATAGGCTAGAAAAAGAA ATCCAGGAAATAGTTCCAGGCATTAGGCATGTGGACATTGAAGCCCATAATCCAATTGTG CCAACCCCATGA