Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g062850.3.1
CDS Infomation	PHD finger alfin-like protein (AHRD V3.3 *** A0A072V846_MEDTR)
Sequence	ATGGACGCCGGTGGAGGAGGAGAACAGTTTGATTCCCGAACTGTGGAAGATGTGTTTGGG GATTTCAAGAGACGACGAACTGCTTTGATTAAGGCTCTTACTGTTGATGTGGAAGAATTT TATCAGCAGTGTGATCCTGAGAAGGAAAACTTGTGCTTGTATGGTCTCCCAAATGAACAA TGGGAGGTCAATCTGCCTGCTGAAGAAGTACCACCTGAACTCCCTGAGCCTGCTCTTGGT ATTAACTTTGCTAGAGATGGGATGGAAGACAAGGATTGGCTATCCTTAGTTGCTGTCCAT AGTGATTCCTGGCTGCTTTCTGTCGCCTTCTATTTTGGTGCTAGATTTGGGTTTGATAAA GCCAGCAGGAAGAAGCTTTTCAACATGATAAATGAACTGCCTACAATATATGAAGTAGTG ACTGGTGCCTCAAAGAAACAACAGAAAGAAAAATCTTCTGGCCATAGTGGCAAGAAATCC AAGTCAAATTCCAAGGCGAGGGCACAAGACTATCAGGAGAAGTTAGCAAAGTTGCAGGCT AAAGATGAAGAGGAGGAGGGTTTGGATGAGCAGGAGGACGAGGATGAGCATGGCGAGACA CTGTGTGGTGCCTGTGGAGAAAATTATGCAGCAGATGAATTTTGGATATGCTGTGACATT TGTGAAAAGTGGTTCCACGGCAAGTGTGTGAAGATCACCCCTGCCAAGGCTGAGCATATC AAGCAATACAAGTGTCCGTCTTGTAGCCACAAGAGACCTCGAGCTGACATATAA

Peptide Sequence

PEP ID	Solyc06g062850.3.1
PEP Infomation	PHD finger alfin-like protein (AHRD V3.3 *** A0A072V846_MEDTR)
Sequence	MDAGGGGEQFDSRTVEDVFGDFKRRRTALIKALTVDVEEFYQQCDPEKENLCLYGLPNEQ WEVNLPAEEVPPELPEPALGINFARDGMEDKDWLSLVAVHSDSWLLSVAFYFGARFGFDK ASRKKLFNMINELPTIYEVVTGASKKQQKEKSSGHSGKKSKSNSKARAQDYQEKLAKLQA KDEEEEGLDEQEDEDEHGETLCGACGENYAADEFWICCDICEKWFHGKCVKITPAKAEHI KQYKCPSCSHKRPRADI*

Transcript Sequence

Transcript ID	Solyc06g062850.3.1
Transcript Infomation	PHD finger alfin-like protein (AHRD V3.3 *** A0A072V846_MEDTR)
Sequence	ATTCTACCCGCCCTCCCACCTTAGTAGTAAGGTTCGATTCTCCACATCGTAATTCCCTCT TTTACCGCACTCGGCTTTATTAAAAATATAACAAAATTTTAATTAGGTTTTTTTATATCA TAGTCCACCATGTTATCCACTATATTCTAGGTTTCCTCATCATCTTCTCTTCACTTATTA AAACCCTTTTCCCCATTCTTTGTTTCTACACACAATTCAAAATCCCCTCCTCCCTCTCTT TCCCCCCCTTTGAACTCTGCAGCCGTACGCCACTCTCATTTTCCTGCGAATTTCCTTCGA GGTTGCTCTTCTGATTAATGGACGCCGGTGGAGGAGGAGAACAGTTTGATTCCCGAACTG TGGAAGATGTGTTTGGGGATTTCAAGAGACGACGAACTGCTTTGATTAAGGCTCTTACTG TTGATGTGGAAGAATTTTATCAGCAGTGTGATCCTGAGAAGGAAAACTTGTGCTTGTATG GTCTCCCAAATGAACAATGGGAGGTCAATCTGCCTGCTGAAGAAGTACCACCTGAACTCC CTGAGCCTGCTCTTGGTATTAACTTTGCTAGAGATGGGATGGAAGACAAGGATTGGCTAT CCTTAGTTGCTGTCCATAGTGATTCCTGGCTGCTTTCTGTCGCCTTCTATTTTGGTGCTA GATTTGGGTTTGATAAAGCCAGCAGGAAGAAGCTTTTCAACATGATAAATGAACTGCCTA CAATATATGAAGTAGTGACTGGTGCCTCAAAGAAACAACAGAAAGAAAAATCTTCTGGCC ATAGTGGCAAGAAATCCAAGTCAAATTCCAAGGCGAGGGCACAAGACTATCAGGAGAAGT TAGCAAAGTTGCAGGCTAAAGATGAAGAGGAGGAGGGTTTGGATGAGCAGGAGGACGAGG ATGAGCATGGCGAGACACTGTGTGGTGCCTGTGGAGAAAATTATGCAGCAGATGAATTTT GGATATGCTGTGACATTTGTGAAAAGTGGTTCCACGGCAAGTGTGTGAAGATCACCCCTG CCAAGGCTGAGCATATCAAGCAATACAAGTGTCCGTCTTGTAGCCACAAGAGACCTCGAG CTGACATATAA