Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g062845.1.1
CDS Infomation

Threonine synthase, putative (AHRD V3.3 *** B9RK44_RICCO)
Sequence

ATGGCGGCTTCTTGCATGCTCAGATCCTCTTTCCTTTCTCCTAACCATAATCTTCATCAA
CAATCCTCTCCTAAATCTAACCGTGCTTCCTTCTTCACTCCTATCAAAGCCACATCTTCA
ACAGATGATGCAATCTCAAAATCTCCACAACTTCAGAAGCACCGCCGCCCTGCTGACGAG
AATATCCGTGAGGAAGCCCGACGCGACGTATCTTCCCACAATTTCTCTGCTAGGTATGTA
CCTTTTAATGCCGATCCTAACTCCAGCGAGTGGTATCCTCTCGATGAGATTATTTATCGC
AGCCGATCAGGTGGCCTACTTGATGTCCAACACGATATGGACGCCCTCAAGAAATTTGAC
GGCCAGTACTGGCGGTCCCTGTTTGATTCCAGGGTGGGCAAGACAACATGGCCTTATGGT
TCTGGTGTTTGGTCCAAGAAGGAATGGGTCCTGCCTGAAATTGACAGTGATGATATTGTC
AGTGCTTTTGAAGGAAATTCCAATCTTTTTTGGGCTGAGCGTTATGGGAAACAATTCCTA
GGCATGAATGATTTGTGGGTCAAACATTGTGGAATCAGCCACACCGGTAGCTTCAAGGAT
CTTGGCATGACCGTATTGGTGAGTCAAGTAAATCGGTTGCGGAAAATGCATAAACCAGTT
GTGGGTGTTGGCTGTGCTTCCACTGGAGACACGTCTGCTGCGCTGTCAGCTTACTGTGCA
TCTGCAGGCATTCCATCAATTGTGTTTTTACCTGCAAATAAGATATCTATGGCGCAACTG
GTTCAACCAATAGCCAATGGGGCCTTTGTGTTGAGTATCGACACTGATTTTGATGGTTGT
ATGCAGTTGATTCGCGAAGTCACAGCTGAGTTGCCAATTTACTTGGCTAATTCCTTAAAC
AGTTTGAGGCTAGAAGGACAAAAGACTGCAGCAATAGAGATACTGCAGCAGTTTGAATGG
GAAGTTCCAGACTGGGTGATAGTTCCCGGTGGTAACCTGGGCAATATATATGCATTTTAC
AAAGGTTTCCACATGTGCAAGGAGCTGGGGCTTGTTGATCGTATCCCAAGACTTGTTTGT
GCTCAAGCAGCCAATGCAAATCCACTTTACGTGCATTATAAGTCTGGTTGGAAAGATTTC
AAACCTGTTAAGGCAAATACAACATTTGCATCTGCTATACAGATTGGTGACCCAGTATCT
ATTGATAGGGCTGTCTTTGCTCTAAAGAAGTCCAATGGGATAGTGGAGGAGGCTACCGAG
GAAGAGTTGATGGATGCGATGGCTCAAGCTGACTCAACTGGGATGTTCATATGCCCGCAC
ACTGGTGTGGCATTGACTGCACTCTCCAAGCTGAGAAAGGCTGGAGTTATTGCGCCTACT
GATAGGACAGTGGTTGTGAGTACAGCTCATGGGTTGAAGTTTACTCAATCCAAGGTTGAT
TATCATTCTAAAGAAATAAAGAACATGGAGTGTCGGTTTGCTAATCCCCCGGTACAGGTG
AAAGCAGACTTTGGATCTGTCATGGATGTTCTGAAGAAGTATCTATTGAGCAAAAATTCC
AAGTTCTAA

Peptide Sequence

PEP ID

Solyc06g062845.1.1
PEP Infomation

Threonine synthase, putative (AHRD V3.3 *** B9RK44_RICCO)
Sequence

MAASCMLRSSFLSPNHNLHQQSSPKSNRASFFTPIKATSSTDDAISKSPQLQKHRRPADE
NIREEARRDVSSHNFSARYVPFNADPNSSEWYPLDEIIYRSRSGGLLDVQHDMDALKKFD
GQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERYGKQFL
GMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSAYCA
SAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLN
SLRLEGQKTAAIEILQQFEWEVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPRLVC
AQAANANPLYVHYKSGWKDFKPVKANTTFASAIQIGDPVSIDRAVFALKKSNGIVEEATE
EELMDAMAQADSTGMFICPHTGVALTALSKLRKAGVIAPTDRTVVVSTAHGLKFTQSKVD
YHSKEIKNMECRFANPPVQVKADFGSVMDVLKKYLLSKNSKF*

Transcript Sequence

Transcript ID

Solyc06g062845.1.1
Transcript Infomation

Threonine synthase, putative (AHRD V3.3 *** B9RK44_RICCO)
Sequence

ATGGCGGCTTCTTGCATGCTCAGATCCTCTTTCCTTTCTCCTAACCATAATCTTCATCAA
CAATCCTCTCCTAAATCTAACCGTGCTTCCTTCTTCACTCCTATCAAAGCCACATCTTCA
ACAGATGATGCAATCTCAAAATCTCCACAACTTCAGAAGCACCGCCGCCCTGCTGACGAG
AATATCCGTGAGGAAGCCCGACGCGACGTATCTTCCCACAATTTCTCTGCTAGGTATGTA
CCTTTTAATGCCGATCCTAACTCCAGCGAGTGGTATCCTCTCGATGAGATTATTTATCGC
AGCCGATCAGGTGGCCTACTTGATGTCCAACACGATATGGACGCCCTCAAGAAATTTGAC
GGCCAGTACTGGCGGTCCCTGTTTGATTCCAGGGTGGGCAAGACAACATGGCCTTATGGT
TCTGGTGTTTGGTCCAAGAAGGAATGGGTCCTGCCTGAAATTGACAGTGATGATATTGTC
AGTGCTTTTGAAGGAAATTCCAATCTTTTTTGGGCTGAGCGTTATGGGAAACAATTCCTA
GGCATGAATGATTTGTGGGTCAAACATTGTGGAATCAGCCACACCGGTAGCTTCAAGGAT
CTTGGCATGACCGTATTGGTGAGTCAAGTAAATCGGTTGCGGAAAATGCATAAACCAGTT
GTGGGTGTTGGCTGTGCTTCCACTGGAGACACGTCTGCTGCGCTGTCAGCTTACTGTGCA
TCTGCAGGCATTCCATCAATTGTGTTTTTACCTGCAAATAAGATATCTATGGCGCAACTG
GTTCAACCAATAGCCAATGGGGCCTTTGTGTTGAGTATCGACACTGATTTTGATGGTTGT
ATGCAGTTGATTCGCGAAGTCACAGCTGAGTTGCCAATTTACTTGGCTAATTCCTTAAAC
AGTTTGAGGCTAGAAGGACAAAAGACTGCAGCAATAGAGATACTGCAGCAGTTTGAATGG
GAAGTTCCAGACTGGGTGATAGTTCCCGGTGGTAACCTGGGCAATATATATGCATTTTAC
AAAGGTTTCCACATGTGCAAGGAGCTGGGGCTTGTTGATCGTATCCCAAGACTTGTTTGT
GCTCAAGCAGCCAATGCAAATCCACTTTACGTGCATTATAAGTCTGGTTGGAAAGATTTC
AAACCTGTTAAGGCAAATACAACATTTGCATCTGCTATACAGATTGGTGACCCAGTATCT
ATTGATAGGGCTGTCTTTGCTCTAAAGAAGTCCAATGGGATAGTGGAGGAGGCTACCGAG
GAAGAGTTGATGGATGCGATGGCTCAAGCTGACTCAACTGGGATGTTCATATGCCCGCAC
ACTGGTGTGGCATTGACTGCACTCTCCAAGCTGAGAAAGGCTGGAGTTATTGCGCCTACT
GATAGGACAGTGGTTGTGAGTACAGCTCATGGGTTGAAGTTTACTCAATCCAAGGTTGAT
TATCATTCTAAAGAAATAAAGAACATGGAGTGTCGGTTTGCTAATCCCCCGGTACAGGTG
AAAGCAGACTTTGGATCTGTCATGGATGTTCTGAAGAAGTATCTATTGAGCAAAAATTCC
AAGTTCTAA