Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g062790.3.1
CDS Infomation

Casein kinase, putative (AHRD V3.3 *** B9S5V9_RICCO)
Sequence

ATGGAGCCTCGTGTTGGTAATAAGTTCAGGCTTGGCCGGAAAATTGGTAGCGGTTCTTTT
GGGGAGATCTACCTCGGTGGTAATGTTCAAACTAATGAAGAGGTTGCTATCAAGCTGGAA
AATGTGAAAACAAAGCATCCTCAACTGTTGTACGAAGCAAAGCTGTATAAAATACTACAA
GGAGGAACTGGAGTCCCCAATTTAAAATGGTTTGGAGTTGAAGGAGATTACAATGTCCTT
GTGATGGATTTACTGGGACCTAGTCTTGAAGATCTTTTCAACTTCTGCAATAGGAAAATG
TCCTTGAAGACCGTTCTCATGCTTGCAGATCAGATGATCAATCGGGTTGAGTTTGTTCAT
GCCAAATCTTTTCTTCATCGAGATATAAAACCTGACAACTTTCTTATGGGATTAGGAAGA
CGTGCAAATCAGGTCTATGTTATTGATTTTGGGCTGGCTAAGAAGTACAGAGACTCATCA
ACTCATCAGCATATTCCGTATAGAGAAAATAAAAATTTGACAGGAACTGCTAGATATGCA
AGCATGAACACTCACCTCGGCATTGAACAAAGTCGAAGGGATGATTTGGAATCATTGGGT
TTTGTTCTGATGTACTTTTTAAGAGGAAGTCTCCCTTGGCAGGGGCTGAAAGCAGGCAAT
AAGAAACAGAAGTATGAGAGGATCAGTGAGAAGAAAGTTTCAACGTCAATAGAGACCTTG
TGTCGAGGCTATCCTGCAGAGTTTGCATCATATTTTCATTACTGTCGATCACTGAGATTT
GATGATAAACCAGATTATGCTTATCTCAAGAGAATTTTCCGTGACCTTTTCATTCGTGAA
GGGTTTCAGTTTGATTATGTATTTGACTGGACCATATTGAAATATCAGCAATCACAGCTT
GCCAATATTCCATCTCGTGCTCTTGGCGGTACTGCTGGGCCAAGTTCAGGGACGCCTCAT
GGTCTTGCTAATGTCGAAAAGAAATCAGGTGGTGAAGAAGGACGGCCAACTGGTTGGTCT
TCATCAAATCTGACACGTAATAGGAGCACAGGGCTCAATTTCAATGCTGGAAGCTTATTG
AAGCAAAAAGGCACAGTTGCTAATGATTTATCTGTGGGTAAAGAGTTACCTAGTTCTAAT
TTTTTCCGGTCAAGTGGATCAGCAAGGCAACCTAATGTCTCTAGCAGTCGAGACCCAGTG
ATTACTGGGGGTGAACCTGACCTCTCCCGCCCTCAGACACTAGATGCAGCAGGCGCAGCA
TCACTGCGTAAAATATTTAATACTACCCAGAAGACTTCACCAGTTGTGTCTTCAGAGCAC
AAGCGCAGCTCCTCCACAAGAAACACAAACCTAAAGAATTTAGAGTCTGCCATCAAAGGA
ATAGAGGGTTTAAGCTTTCGATGA

Peptide Sequence

PEP ID

Solyc06g062790.3.1
PEP Infomation

Casein kinase, putative (AHRD V3.3 *** B9S5V9_RICCO)
Sequence

MEPRVGNKFRLGRKIGSGSFGEIYLGGNVQTNEEVAIKLENVKTKHPQLLYEAKLYKILQ
GGTGVPNLKWFGVEGDYNVLVMDLLGPSLEDLFNFCNRKMSLKTVLMLADQMINRVEFVH
AKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYA
SMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGNKKQKYERISEKKVSTSIETL
CRGYPAEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQL
ANIPSRALGGTAGPSSGTPHGLANVEKKSGGEEGRPTGWSSSNLTRNRSTGLNFNAGSLL
KQKGTVANDLSVGKELPSSNFFRSSGSARQPNVSSSRDPVITGGEPDLSRPQTLDAAGAA
SLRKIFNTTQKTSPVVSSEHKRSSSTRNTNLKNLESAIKGIEGLSFR*

Transcript Sequence

Transcript ID

Solyc06g062790.3.1
Transcript Infomation

Casein kinase, putative (AHRD V3.3 *** B9S5V9_RICCO)
Sequence

AGAATTATTCAAAAAGCTGAAATCTTGATTTTTCTTTTTTTTTTTTTTTTTTTCAAATTT
AAATTTTTAGTCTCCGATGGAGCCTCGTGTTGGTAATAAGTTCAGGCTTGGCCGGAAAAT
TGGTAGCGGTTCTTTTGGGGAGATCTACCTCGGTGGTAATGTTCAAACTAATGAAGAGGT
TGCTATCAAGCTGGAAAATGTGAAAACAAAGCATCCTCAACTGTTGTACGAAGCAAAGCT
GTATAAAATACTACAAGGAGGAACTGGAGTCCCCAATTTAAAATGGTTTGGAGTTGAAGG
AGATTACAATGTCCTTGTGATGGATTTACTGGGACCTAGTCTTGAAGATCTTTTCAACTT
CTGCAATAGGAAAATGTCCTTGAAGACCGTTCTCATGCTTGCAGATCAGATGATCAATCG
GGTTGAGTTTGTTCATGCCAAATCTTTTCTTCATCGAGATATAAAACCTGACAACTTTCT
TATGGGATTAGGAAGACGTGCAAATCAGGTCTATGTTATTGATTTTGGGCTGGCTAAGAA
GTACAGAGACTCATCAACTCATCAGCATATTCCGTATAGAGAAAATAAAAATTTGACAGG
AACTGCTAGATATGCAAGCATGAACACTCACCTCGGCATTGAACAAAGTCGAAGGGATGA
TTTGGAATCATTGGGTTTTGTTCTGATGTACTTTTTAAGAGGAAGTCTCCCTTGGCAGGG
GCTGAAAGCAGGCAATAAGAAACAGAAGTATGAGAGGATCAGTGAGAAGAAAGTTTCAAC
GTCAATAGAGACCTTGTGTCGAGGCTATCCTGCAGAGTTTGCATCATATTTTCATTACTG
TCGATCACTGAGATTTGATGATAAACCAGATTATGCTTATCTCAAGAGAATTTTCCGTGA
CCTTTTCATTCGTGAAGGGTTTCAGTTTGATTATGTATTTGACTGGACCATATTGAAATA
TCAGCAATCACAGCTTGCCAATATTCCATCTCGTGCTCTTGGCGGTACTGCTGGGCCAAG
TTCAGGGACGCCTCATGGTCTTGCTAATGTCGAAAAGAAATCAGGTGGTGAAGAAGGACG
GCCAACTGGTTGGTCTTCATCAAATCTGACACGTAATAGGAGCACAGGGCTCAATTTCAA
TGCTGGAAGCTTATTGAAGCAAAAAGGCACAGTTGCTAATGATTTATCTGTGGGTAAAGA
GTTACCTAGTTCTAATTTTTTCCGGTCAAGTGGATCAGCAAGGCAACCTAATGTCTCTAG
CAGTCGAGACCCAGTGATTACTGGGGGTGAACCTGACCTCTCCCGCCCTCAGACACTAGA
TGCAGCAGGCGCAGCATCACTGCGTAAAATATTTAATACTACCCAGAAGACTTCACCAGT
TGTGTCTTCAGAGCACAAGCGCAGCTCCTCCACAAGAAACACAAACCTAAAGAATTTAGA
GTCTGCCATCAAAGGAATAGAGGGTTTAAGCTTTCGATGATGAGGTACTGGATTAGTAGC
TCTGCTTTGTCACAATTCCCCCTCTACTGTATATCTTGGCACAGCAAACACACCAACATG
GCGGAGTATGAGTTCTGATATTAGTTGTTTCCAGGAGGAACCATAAACAATGCAACCCCC
GCAAACTCACAAATCCCAGTTTATGTTTTGTCCATACAGACACAGTTATAGGCACTTATC
GTATTCTTTTTCGTCTCTATCTCTCCTGTTCTTGTTCTATCGTGTTATTCATATTTATCT
TATGTTGTGAATTATGAAGAGGCCCATATATAATTGCCGATTTATATGGTCCACGAGATG
TTTGACGCTAGCAGATTCTTCTGCTTTGGACATGAGCAAACTCTCTTTTGTTTCAAGCTA
TTTAAATATCAATCACAGGTCTCTGTGTGGTCATTTACTCAGTTGGCAGTCTTAGTGGGC
TTTTATACATTAAAATTGTGAAATTTGGACAAGTAGTGTATTTGTTTTTAAATTATAAAT
GGTATTTGAAAATAGAAGTTGTGTTGGAAGATTGTAACAATTGTATGCCAAAAACAGTTT
TCTGCCTCTTCAAGTAGTGAAAAAAGGTTGCAAGTATAGTCTATCTCTGCAATGTAAGAT
ACAGAAATAACATGATATGAGTGGTGTTGCGTTGACTAATTTGCTTCGATTATTGCTACA
TATTGTTCATAATATATCGTGTTGTGTTACATTATAATATAAATTAAAAAAAGTAAGAGT
ATAAGGTGAACTTAA