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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g061190.1.1
CDS Infomation

VQ motif-containing protein (AHRD V3.3 *** AT2G35230.3)
Sequence

ATGGATAATTCAAATCGGTCGTACAATAGGAATGCTGATCATTTGGGTGTGAATAAATTT
GGGAAGAATATCAACAAGAGTCCTATACACCAACCTAATTTTAACAATGCAAATAGTGCT
AGGCAACAACCTCAACCTCAGGTTTACAATATTAACAAGAATGATTTTCGGAGTGTTGTT
CAGCAACTGACAGGTTCACCATCTCAAGAGCCTCCATCTAAACCTCCCCAGAATCCTTCT
AAGCCTCCGAGTATGAGATTACAAAAGATTCGGCCACCGCCTTTGACTCCTATAAATCGT
CCCCAAATTCCAATGCATCCTCCAGCACAGATCCTTGCCCCAGCTCGACCTGCTGGAGGC
GTTCCTTACCAAAACAATATTGCTAGACCGCCTCCTCACTATGGTCAGCCCTCACCACCT
ATGTTACCTCCAACTCCTGGAGATGTTTGGACAAATACAACTGAGTCTCCGATTTCAGTT
TATATGCGTTATCTTCAAAATTCAATAATAGATTCAGGGCCTAAACAAACACAATTTCAA
GGACCTGGTCATTTTCAAGCACATCCAGCGTCATCTGGTTTACTTCCTAATCCTTCAATG
CCACCTTTTCCATCTCCTAGAATGAATGGCCCGCCTCCTTTCCCATTGTCGCGGATGAAT
GGTCCTCCTCCACCTCTTTTATCTCCTAGAATGAATGGCCCGCCGCCTCTCCCATTCGCT
CGGTTGAATGGTCCTCCTCCGCGTCTTCTATCTCCTAGAATGAACGGGCCACCTCTTCTC
CCATCTCCTAGAATGAATGGTCCTCCTCCACCTCTTCCTTCTCCGGGAATAAATGGGCCT
CCTCCTTTGCCTTCACCTACCTCTCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAAC
TTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCG
CTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCA
CAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATG
TCAAGTCCAAGATGGAGGGGTCAATAG

Peptide Sequence

PEP ID

Solyc06g061190.1.1
PEP Infomation

VQ motif-containing protein (AHRD V3.3 *** AT2G35230.3)
Sequence

MDNSNRSYNRNADHLGVNKFGKNINKSPIHQPNFNNANSARQQPQPQVYNINKNDFRSVV
QQLTGSPSQEPPSKPPQNPSKPPSMRLQKIRPPPLTPINRPQIPMHPPAQILAPARPAGG
VPYQNNIARPPPHYGQPSPPMLPPTPGDVWTNTTESPISVYMRYLQNSIIDSGPKQTQFQ
GPGHFQAHPASSGLLPNPSMPPFPSPRMNGPPPFPLSRMNGPPPPLLSPRMNGPPPLPFA
RLNGPPPRLLSPRMNGPPLLPSPRMNGPPPPLPSPGINGPPPLPSPTSQYLLPSPTGFLN
LLSPRSPYPLLSPGMQHPPPLTPNFFFSPMAQPGGFGTGPQFPPSPGYGFPLSPSGFFAM
SSPRWRGQ*

Transcript Sequence

Transcript ID

Solyc06g061190.1.1
Transcript Infomation

VQ motif-containing protein (AHRD V3.3 *** AT2G35230.3)
Sequence

ATGGATAATTCAAATCGGTCGTACAATAGGAATGCTGATCATTTGGGTGTGAATAAATTT
GGGAAGAATATCAACAAGAGTCCTATACACCAACCTAATTTTAACAATGCAAATAGTGCT
AGGCAACAACCTCAACCTCAGGTTTACAATATTAACAAGAATGATTTTCGGAGTGTTGTT
CAGCAACTGACAGGTTCACCATCTCAAGAGCCTCCATCTAAACCTCCCCAGAATCCTTCT
AAGCCTCCGAGTATGAGATTACAAAAGATTCGGCCACCGCCTTTGACTCCTATAAATCGT
CCCCAAATTCCAATGCATCCTCCAGCACAGATCCTTGCCCCAGCTCGACCTGCTGGAGGC
GTTCCTTACCAAAACAATATTGCTAGACCGCCTCCTCACTATGGTCAGCCCTCACCACCT
ATGTTACCTCCAACTCCTGGAGATGTTTGGACAAATACAACTGAGTCTCCGATTTCAGTT
TATATGCGTTATCTTCAAAATTCAATAATAGATTCAGGGCCTAAACAAACACAATTTCAA
GGACCTGGTCATTTTCAAGCACATCCAGCGTCATCTGGTTTACTTCCTAATCCTTCAATG
CCACCTTTTCCATCTCCTAGAATGAATGGCCCGCCTCCTTTCCCATTGTCGCGGATGAAT
GGTCCTCCTCCACCTCTTTTATCTCCTAGAATGAATGGCCCGCCGCCTCTCCCATTCGCT
CGGTTGAATGGTCCTCCTCCGCGTCTTCTATCTCCTAGAATGAACGGGCCACCTCTTCTC
CCATCTCCTAGAATGAATGGTCCTCCTCCACCTCTTCCTTCTCCGGGAATAAATGGGCCT
CCTCCTTTGCCTTCACCTACCTCTCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAAC
TTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCG
CTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCA
CAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATG
TCAAGTCCAAGATGGAGGGGTCAATAG