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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g061130.3.1
CDS Infomation

Gag-Pol polyprotein/retrotransposon (AHRD V3.3 *** AT2G38695.1)
Sequence

ATGTCTTCTCCTCTTATCGTTACACTCTCATCATCCCTTCGCTCTTCGTTACCTCTCCAC
CGCCATGCTAGCATTTCCAACGTGCTCTGCAGTCGTCATTTGTACCTGCGGCAAAAATCC
AGGCATCTGCTTCGTCTCTGCTCTGTTAATAGTGATCATAATGTGTACGAGTCACCAGAA
TTTCAAAACAGTCCTCTAGATCAAAAAGGTACTGCAGAAAAAGATGAAATTAGTCAAACA
GAATCACCCACATCAAACACGGTTCTGACGAGACTGAGAAGATATGGTGTTGCAGGAGTA
TTATCATATGGACTACTTAATACTGCATACTACCTTACTACCTTTCTTATTGTGTGGTTT
TATGTTGCTCCATCACCTGGAAGAATGGGTTACCTTGCTGCAGTTGAACGGTTTCTCAAA
GTAATGGCCATGGTATGGGCTGGTAGCCAGGTTACAAAGATTGTCCGAGCAGGGGGGGCT
TTAGCTCTCGCTCCTTTTGTGGACACAGGATTATCATGGTTTACAACCAAGATGAAGTTT
AAATCACAAGGGAAAGTGAGCACAACTCTAATCACCATGTTTTCAGTTTTGCCATCGTCT
CTTTTCATTATTGCGTTAAGGAGATGCAATCGAAACTCTCTTGCTGTTCGAGTAAATCAG
CTTGTCAATGAGAAAACATTTCCCGTCTGA

Peptide Sequence

PEP ID

Solyc06g061130.3.1
PEP Infomation

Gag-Pol polyprotein/retrotransposon (AHRD V3.3 *** AT2G38695.1)
Sequence

MSSPLIVTLSSSLRSSLPLHRHASISNVLCSRHLYLRQKSRHLLRLCSVNSDHNVYESPE
FQNSPLDQKGTAEKDEISQTESPTSNTVLTRLRRYGVAGVLSYGLLNTAYYLTTFLIVWF
YVAPSPGRMGYLAAVERFLKVMAMVWAGSQVTKIVRAGGALALAPFVDTGLSWFTTKMKF
KSQGKVSTTLITMFSVLPSSLFIIALRRCNRNSLAVRVNQLVNEKTFPV*

Transcript Sequence

Transcript ID

Solyc06g061130.3.1
Transcript Infomation

Gag-Pol polyprotein/retrotransposon (AHRD V3.3 *** AT2G38695.1)
Sequence

ATGTCTTCTCCTCTTATCGTTACACTCTCATCATCCCTTCGCTCTTCGTTACCTCTCCAC
CGCCATGCTAGCATTTCCAACGTGCTCTGCAGTCGTCATTTGTACCTGCGGCAAAAATCC
AGGCATCTGCTTCGTCTCTGCTCTGTTAATAGTGATCATAATGTGTACGAGTCACCAGAA
TTTCAAAACAGTCCTCTAGATCAAAAAGGTACTGCAGAAAAAGATGAAATTAGTCAAACA
GAATCACCCACATCAAACACGGTTCTGACGAGACTGAGAAGATATGGTGTTGCAGGAGTA
TTATCATATGGACTACTTAATACTGCATACTACCTTACTACCTTTCTTATTGTGTGGTTT
TATGTTGCTCCATCACCTGGAAGAATGGGTTACCTTGCTGCAGTTGAACGGTTTCTCAAA
GTAATGGCCATGGTATGGGCTGGTAGCCAGGTTACAAAGATTGTCCGAGCAGGGGGGGCT
TTAGCTCTCGCTCCTTTTGTGGACACAGGATTATCATGGTTTACAACCAAGATGAAGTTT
AAATCACAAGGGAAAGTGAGCACAACTCTAATCACCATGTTTTCAGTTTTGCCATCGTCT
CTTTTCATTATTGCGTTAAGGAGATGCAATCGAAACTCTCTTGCTGTTCGAGTAAATCAG
CTTGTCAATGAGAAAACATTTCCCGTCTGA