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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g061120.3.1
CDS Infomation

SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A103XWK1_CYNCS)
Sequence

ATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCC
AGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTC
AATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGC
TCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGA
ACTTGCCCTTTCATGTGTCCTGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTA
GCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAA
AAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCG
GTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTT
GAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATG
CAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTTAAATTCCATATA
ATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTC
AACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGT
ACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCAC
CTTGATTCCAAAACCCAAGGAACAGGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCT
TCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAGATACTTTAAA
TTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTAT
TGCATTATTGAACCTTCTATCAATGAGGTGAGTTCTTGTATAATAGCAAAAATTGCTCCT
GTGGTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTT
CCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAGGAATGGGATGTAGCATCTTTCTGC
AAAGACAGTGGCCTTCAAACCTCCGTTGACGAAGAAGGAAATAGCTGCTTGCCTACGAAG
CAAACAACTCTTATCCATCCAAAGGGAGGGTTGCACAAGTATTATCCTCTGGAATCAGAA
CGGTTTGAGAGGTTTTCTGTTGAACTGTAA

Peptide Sequence

PEP ID

Solyc06g061120.3.1
PEP Infomation

SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A103XWK1_CYNCS)
Sequence

MAGRSQPPYRPRPNFSSSSSRSYHPSQPSRNFQSHHTKNFNSSTPNGTPIQNNASDNKTS
SSNWDKVIDEDIDDIQSLVGTCPFMCPVEEREKRERLRDLAVFERLHGNPRQSSPSLAVK
KFCRTISVKTLQDSDVRPLSVLEDTLNYLCNLLDSTEHPFEVVHDFIFDRMRSIRQDLSM
QNISCSRVVSMYERMVKFHIISQHKLRRCSGSNISSLSYLNMEQLTKALATLFNLYEANR
TTAPIFKNEADFFSFYVLLHLDSKTQGTGETLSLWFRRVPSHIMKSTEMNFARKILRYFK
LGFFKKFIHTTESEASYLQYCIIEPSINEVSSCIIAKIAPVVRSLAISCVNHGGYKPQPF
PLVALSKLLMMKEWDVASFCKDSGLQTSVDEEGNSCLPTKQTTLIHPKGGLHKYYPLESE
RFERFSVEL*

Transcript Sequence

Transcript ID

Solyc06g061120.3.1
Transcript Infomation

SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A103XWK1_CYNCS)
Sequence

GTAACTATTACTTGTGGACCAAATAAACATAGTCCAAATTGAAGGGGGAACTGAACCATT
TTTATATTAGGACGGTGTTGCTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACG
CCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTC
TTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAA
AAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAA
GACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTT
AGTTGGAACTTGCCCTTTCATGTGTCCTGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCG
AGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGC
TGTTAAAAAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCC
TCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCA
TCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCT
AAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTTAAATT
CCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTC
ATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGC
AAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCT
TCTCCACCTTGATTCCAAAACCCAAGGAACAGGGGAGACACTGTCTTTATGGTTTCGTCG
CGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAGATA
CTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTT
GCAGTATTGCATTATTGAACCTTCTATCAATGAGGTGAGTTCTTGTATAATAGCAAAAAT
TGCTCCTGTGGTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCA
GCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAGGAATGGGATGTAGCATC
TTTCTGCAAAGACAGTGGCCTTCAAACCTCCGTTGACGAAGAAGGAAATAGCTGCTTGCC
TACGAAGCAAACAACTCTTATCCATCCAAAGGGAGGGTTGCACAAGTATTATCCTCTGGA
ATCAGAACGGTTTGAGAGGTTTTCTGTTGAACTGTAA