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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g061040.3.1
CDS Infomation

Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** G7JHM7_MEDTR)
Sequence

ATGGCTTCATTCACTCTGTTCTCCTCTTTCTCTTCTACTAAAAAAAACACTCTCATCTCT
TCCTTTTCTTCTTCTTCTATTACCTCTTCTCTCTATCGCACAAGCTTTGCTCCCAAACGA
ACCCGGCCTCTCAACTCCGTCATTAATTGTGAAATCAATGAACCAGCGAATGAGAAGCCT
AATGTGCCAATCATTAATGATGTGATACTTCCAACGTTCTTGCAAGACAAATGCTCAGAG
AATGCAGTTACCAGCGATAACACCAAGCTGAATCCAAAACTGAAGTTATTTTCTGGAACT
GCGAATCCTTCACTTTCTGAGGAAATTGCTTGGAACATGGGGCATGAACTGGGGAAGATC
ACCATCAAGCGCTTTGCTGATGGTGAAATTTATGTCCAGTTGCAAGAAAGTGTTCGAGGA
TGTGATGTTTTCTTGATTCAGCCCACTTGCCCTCCAGTCAATGAAAACCTTATGGAGCTT
TTGGTGATGATAGATGCATGCCGAAGGGCTTCAGCCAAAAATATCACTGCTGTGATTCCA
TATTTTGGATATGCCAGAGCTGATAGGAAGACACAAAATCGTCAATCCATTGCTGCCAAA
TTGGTTGGGAACGTTATAACAGAAGCAGGTGCAGATCGTGTTCTAGCTTGTGATCTTCAC
TCTGGGCAATCCATGGGTTATTTTGACATTCCAGTGGACCATGTACACTGTCAGCCTGTT
ATCACGGATTACCTTGCTAGCAAGAAGATTAGTTCCAATGATCTGGTGGTGGTCTCTCCT
GATGTCGGGGCAGTTGCTAGAGCACGTGCTTTTGCAAAAAAGTTGGATGCACCTTTAGCC
ATTGTCGACAAAAGATTCCAGGAGCACAATCATGCTGAGGTTATGAACCTGATTGGTGAT
GTTAAAGGAAAAGTTGCTGTCATGGTTGATGACATGATTGACACAGCAGGGACTATTTGC
AAAGGTGCAGAACTTTTGCACGAAGAGGGAGCACGGGAAATCTATGCATGCTGCACACAT
GGTGTTTTTAGCCCGCCTGCAATCGGAATGTTGTCAAGTGGCTTATTTGAAGAGGTTATC
ACCACAAACACAATTCCTGTGATGGACAGACACTACTTCCCCCAGCTGACTGTTCTCTCA
GTTGCAAACCTTCTTGGTGAAACAATTTGGCGTGTCCATGGTGATCGTTCCGTGAGCAGC
ATTTATCAGTAG

Peptide Sequence

PEP ID

Solyc06g061040.3.1
PEP Infomation

Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** G7JHM7_MEDTR)
Sequence

MASFTLFSSFSSTKKNTLISSFSSSSITSSLYRTSFAPKRTRPLNSVINCEINEPANEKP
NVPIINDVILPTFLQDKCSENAVTSDNTKLNPKLKLFSGTANPSLSEEIAWNMGHELGKI
TIKRFADGEIYVQLQESVRGCDVFLIQPTCPPVNENLMELLVMIDACRRASAKNITAVIP
YFGYARADRKTQNRQSIAAKLVGNVITEAGADRVLACDLHSGQSMGYFDIPVDHVHCQPV
ITDYLASKKISSNDLVVVSPDVGAVARARAFAKKLDAPLAIVDKRFQEHNHAEVMNLIGD
VKGKVAVMVDDMIDTAGTICKGAELLHEEGAREIYACCTHGVFSPPAIGMLSSGLFEEVI
TTNTIPVMDRHYFPQLTVLSVANLLGETIWRVHGDRSVSSIYQ*

Transcript Sequence

Transcript ID

Solyc06g061040.3.1
Transcript Infomation

Ribose-phosphate pyrophosphokinase (AHRD V3.3 *** G7JHM7_MEDTR)
Sequence

CTTGAAAGATTTTTTCTTGAATAGATAGAGTATTATTGATTTATTACATCAAAAATAATT
TCAAATTAGAATAGAAAACATCTCAACTAATTAACAAATAAAAAGATTTTTTTAAAAAAC
GAATGGAGTATTATTGATTTAGTACGTCAAAATAGTTCCAAACTAGAACAAAAAACATCT
CAATTAATTAACAAACATTTCAAATTCTCGATTAATGAAAAATTAAATATATTAGACTAA
AAAAATTAAATTTAGTCAAAATCTCTTTTAGACTAAATTTATTGTTTTTTTCCCTTAAAA
AGATTCAAACACGTAAAATGACCCTGCTTTGACACCTGCGTGTTTGTCATTGTGTGACCT
AGCAAACAAAATCCTCCTGACACTAAACCGAAAAGCCCCACATATAAATACGGGAAGAGG
AAACTCGGGCGGGTCACTCTGCTCTTCTTCTGATTTTGTGATGGCTTCATTCACTCTGTT
CTCCTCTTTCTCTTCTACTAAAAAAAACACTCTCATCTCTTCCTTTTCTTCTTCTTCTAT
TACCTCTTCTCTCTATCGCACAAGCTTTGCTCCCAAACGAACCCGGCCTCTCAACTCCGT
CATTAATTGTGAAATCAATGAACCAGCGAATGAGAAGCCTAATGTGCCAATCATTAATGA
TGTGATACTTCCAACGTTCTTGCAAGACAAATGCTCAGAGAATGCAGTTACCAGCGATAA
CACCAAGCTGAATCCAAAACTGAAGTTATTTTCTGGAACTGCGAATCCTTCACTTTCTGA
GGAAATTGCTTGGAACATGGGGCATGAACTGGGGAAGATCACCATCAAGCGCTTTGCTGA
TGGTGAAATTTATGTCCAGTTGCAAGAAAGTGTTCGAGGATGTGATGTTTTCTTGATTCA
GCCCACTTGCCCTCCAGTCAATGAAAACCTTATGGAGCTTTTGGTGATGATAGATGCATG
CCGAAGGGCTTCAGCCAAAAATATCACTGCTGTGATTCCATATTTTGGATATGCCAGAGC
TGATAGGAAGACACAAAATCGTCAATCCATTGCTGCCAAATTGGTTGGGAACGTTATAAC
AGAAGCAGGTGCAGATCGTGTTCTAGCTTGTGATCTTCACTCTGGGCAATCCATGGGTTA
TTTTGACATTCCAGTGGACCATGTACACTGTCAGCCTGTTATCACGGATTACCTTGCTAG
CAAGAAGATTAGTTCCAATGATCTGGTGGTGGTCTCTCCTGATGTCGGGGCAGTTGCTAG
AGCACGTGCTTTTGCAAAAAAGTTGGATGCACCTTTAGCCATTGTCGACAAAAGATTCCA
GGAGCACAATCATGCTGAGGTTATGAACCTGATTGGTGATGTTAAAGGAAAAGTTGCTGT
CATGGTTGATGACATGATTGACACAGCAGGGACTATTTGCAAAGGTGCAGAACTTTTGCA
CGAAGAGGGAGCACGGGAAATCTATGCATGCTGCACACATGGTGTTTTTAGCCCGCCTGC
AATCGGAATGTTGTCAAGTGGCTTATTTGAAGAGGTTATCACCACAAACACAATTCCTGT
GATGGACAGACACTACTTCCCCCAGCTGACTGTTCTCTCAGTTGCAAACCTTCTTGGTGA
AACAATTTGGCGTGTCCATGGTGATCGTTCCGTGAGCAGCATTTATCAGTAGGCAACAAT
ATAGTTTTTCCAGCGTTGTTTTCCTATATATGTAGCCAAAATAGATACTAGGGACGGGTT
AAGGGTAGACCTGCAAAAGAAACTTCATCAAATAGGATCAGATAGGCAAATACTGGAAGA
ATGAATGATGTTAATAGGATCGTCCAACTCATCATAATTTAAAAAAAATATGAAGTCTTC
TTCCTACTCCACTCTATCATTTCATCTTCACCGTACACCCTTCCCCCTCAAATAATAATG
GGAAAAAGGGTCAAAATATCCCTCAATTAA