Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g060960.2.1
CDS Infomation	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 (AHRD V3.3 - W9S0E6_9ROSA)
Sequence	ATGATTTATTGGACTGAGTTGGACATAAATTCAACAATATGGATGGTGATGATTCATATA GAAAATGAGTTCTTTTGCAGAATGATTTCTATCATACTAAATACTGATCTTTTAGGCCAA AGGAGAAATAGATATCAAATGTCGTCTTTTCAGTTTCAGGATTCTAACGTGTCAAAAGAT GGGTTATCCAATAAAAGCGTGAAGAAGCGGCTGTTGGAAAATGGTTGCCACTCCTCATAT TTGGGTATTATACCAAAATATAAAATTCGAAAAGTCTCAGCAGTGCGAGATTTTCCTCCA GGGTGTGGTAGAACTTCTCTGAAAGTTGATTTGAATCATGTGCAAAATGCTGAAGTGTCC ACCAATATTGAAGACATGACTAACATTATATTGGTCGATGGTGTTAAAGAGACTAACATT GAGGTTAAATCACAGTCTGTTGAGGTTGTGAACGATCTAATTAACTTGGAAAATCAAGAA AATGTGGATAGGCTAGCAGGGGAAGTGATGGCGACAAACATGAGTGCAATTGCAAATGGG GTAGGAGAAAAAATAAGTGATGAAAAATCGACTGGATTTGAGTTACCCAAAGATCTCAAA ACTAGTGAAATGGAGCTTTCCAAGGAAACAGAAGACATTCAGAATGACACATCAGTGAAG GAAGTTGATGAGCAGGGTTTACCTTTGGTTGAAAGTATTAATGGTGGGCACATGACACAG AAGCTAATCAGTGTTATGGAACATACATCCACCTCGCCAAAGAATAAGTACCGCAAAAGA AGAGTATCTGCTGTTCGAGACTTCCCTCCATTTTGTGGAACAAAGGTTCCTAAGTCAACT GAGCAGAATTGTTTCGGTGTTACTGAAGAAAGCAAGGATGTGGCTGGATTCGGTAAGGCA GTCACAAGGAATGAAGTAATTGAGACATTGAGAGAGGTTACAGAAACTGGGGCATTGCCA GAGAAGTTGATTGGAAGCGAGGATGCTGATTCTCTGAAAGATAGAGACGTTTCTAGTCCA AAAGATAGGCAGTTGGAACAAATCACAATGGTCCGGACTGAAGAACAGGAAGGCGTCCAA TGTGATTATGATGGAAGAAGTCAGGTGGAAAGAACTGTGGTTATGCCTGAGATAATGACG AAAAAAGGGAGTGATGCAGGACCTGTGGGGAAGGAGACCCTGGTTTATTCAGAGAACGAA AGGGAAAAGTTAACTTCTGCAAGTAGTGCTCTTGGTTCTGGAAATGAAAAGCAGATTACA AAAGGTGCTAAGCCATCTGGTGCACGGAAACAAGGGAAGCAAAAGAGTCTAGACGACCCT GTGAGTGGAAATGAAATTGTTGTCTCACAGGTCGAAAGTCATTTGACAAAGACTGCAGTC AACGCTTTTGGTTCTGGGCATGAAATAGTTAAGCCAATTGTGCAAGGTCTGATGGCCAAG CCATGCTGTCCATGGAGGCAGGGAGAGCCAACTAGTTTAGATTGTGGAAACCAAGTTGAG AAGGATGATTTTTCTGGGCGCAAGAAGGCCAAAGCTGTTACCAGAAAAAGTAATCCTAGA GGTAAGAAAAAATCAGTTACTCTTGGTGAAGCTACTGATGGACTTTCAAGTGCATTAGTT GTGTTCAATGACAAAGGGCCTGGTTTGTGGGCTACGAGCAATGACGGAGCTTGCAGTTTG AATAGAGAAGCTGTACATGAAGATTCTCCCGTTCGACGAGGACAATGTGATTTTGATGTG ACCCTACCACCTTTTGGTCCAAACAGTTCCAGTCATGGTGATGCCCGTACTAAAGTTAGA GAGACTCTTCGTCTGTTTCAGGGTATATGTAGAAAGCTTTTGCAAGGTGAAGAATCAAAG TCAAAACCTGAAGAAGCAAAATCGAAGCAGGGACCAAACAGAATTGATCTTCATGCAGCA AAAATCATCAAAGAAAAAGGAAAAGAAGTTAACACGGGTCAGCACATACTGGGTGAAGTT CCCGGAGTTGAAGTAGGGGATGAGTTCCAATACAGGGTGGAACTTGCTATTGTGGGGGTT CATCGCCTGTATCAGGCTGGTATAGATTACATGAAGCAAGGAGGTATGCTAATCGCGATT AGTATTGTTTCTTCAGGGGTCTATGATGACGGTCTGGAAGATGCTGATGTGTTGATTTAT TCTGGGCAAGGTGGAAATGTGGTGGGTAAGTCCAAAACCCCTGAGGATCAGAAACTGGAA AGAGGTAATTTAGCTTTGAAGAATAGTATATCAGTAAAGAATCCTGTTCGGGTGATTCGT GGCTCTAAGGAGACTAAGAACTCCGACTCTGTGGATGGTAAAGGTAAGTTAGTGACAACA TATGTTTATGATGGGTTGTACACTGTTGAGAATTATTGGACAGAACAAGGGACAAAGGGT AAGATGGTTTTTATGTTTAAATTGGTGAGAGTTCCTGGGCAACCAGAGCTTGCTTGGAAA GAAGTAAAGTCATCGAGAAAGTCCAAAGTACGGCATGGTGTTTGTGTCCACGACATTACA GATGGAAAGGAGACATTCGCGATAAGTGCTGTGAATACAATTGATGGTGAGAAACCTCCA CCATTCAATTACATCCAGAAGATTATATATCCTGACTGGTTCCAGCCTTCTCCTTTTAAA GGTTGTGATTGTATTGGGAGATGTTCTGATTCCAAGAAGTGCTCATGTGCAGTTAAAAAT GGTGGTGAGATCCCATACAACCGTAATGGGGCTATTGTTGAAGTGAAGCCTCTTGTATAT GAATGTGGTCCTCATTGTAAATGTCCCCCTTCTTGTTACAATAGAGTCAGCCAACATGGT ATTAAAGTTCCACTCGAGATCTTTAAGACAAATTCAAGGGGCTGGGGTGTGAGAGCTCTT ACATCTATTCCTTCAGGAACCTTTATATGTGAGTATGTAGGAGAACTTCTTGAAGACAAG GAAGCTGAACAAAGAATTGGCAGTGATGAGTACCTTTTTGATATTGGGCAGAACTATAGT GATTGTTCTGTGAACTCTTCCAGGCAGGCAGAAGTAAGTGAGGTAGTAGAAGAGGGTTAT ACAATTGATGCAGCTCAGTATGGAAATATCGGGCGATTTATCAATCACAGTTGCTCACCC AATTTGTATGCACAAAGCGTTCTTTATGATCATGAAGATAAGAAAATGCCTCATATCATG CTTTTTGCAGCAGATAACATTCCTCCTTTGGCGGAGCTCAGTTATCATTACAATTATTCC GTGGATCAGGTACATGACTCCAAGGGCAATATCAAGGTGAAGAAATGCTTTTGTGGATCT TCAGAGTGTAGTGGTAAGAATTTTCACTGCAATTTATTCGTCCTCCTTACTTTGATGTTT GCATTTGATCGGATTAATATGTACTTGTTTGTATCTATCTCTTCTTTCCCTATTGCAAAG AAAGTCGGCTACATTGTGGGTAAGGTGCATACAGATTTTGCTGGGAAAGAGAAATTTGCT CAGGGAGGCTCATAA

Peptide Sequence

PEP ID	Solyc06g060960.2.1
PEP Infomation	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 (AHRD V3.3 - W9S0E6_9ROSA)
Sequence	MIYWTELDINSTIWMVMIHIENEFFCRMISIILNTDLLGQRRNRYQMSSFQFQDSNVSKD GLSNKSVKKRLLENGCHSSYLGIIPKYKIRKVSAVRDFPPGCGRTSLKVDLNHVQNAEVS TNIEDMTNIILVDGVKETNIEVKSQSVEVVNDLINLENQENVDRLAGEVMATNMSAIANG VGEKISDEKSTGFELPKDLKTSEMELSKETEDIQNDTSVKEVDEQGLPLVESINGGHMTQ KLISVMEHTSTSPKNKYRKRRVSAVRDFPPFCGTKVPKSTEQNCFGVTEESKDVAGFGKA VTRNEVIETLREVTETGALPEKLIGSEDADSLKDRDVSSPKDRQLEQITMVRTEEQEGVQ CDYDGRSQVERTVVMPEIMTKKGSDAGPVGKETLVYSENEREKLTSASSALGSGNEKQIT KGAKPSGARKQGKQKSLDDPVSGNEIVVSQVESHLTKTAVNAFGSGHEIVKPIVQGLMAK PCCPWRQGEPTSLDCGNQVEKDDFSGRKKAKAVTRKSNPRGKKKSVTLGEATDGLSSALV VFNDKGPGLWATSNDGACSLNREAVHEDSPVRRGQCDFDVTLPPFGPNSSSHGDARTKVR ETLRLFQGICRKLLQGEESKSKPEEAKSKQGPNRIDLHAAKIIKEKGKEVNTGQHILGEV PGVEVGDEFQYRVELAIVGVHRLYQAGIDYMKQGGMLIAISIVSSGVYDDGLEDADVLIY SGQGGNVVGKSKTPEDQKLERGNLALKNSISVKNPVRVIRGSKETKNSDSVDGKGKLVTT YVYDGLYTVENYWTEQGTKGKMVFMFKLVRVPGQPELAWKEVKSSRKSKVRHGVCVHDIT DGKETFAISAVNTIDGEKPPPFNYIQKIIYPDWFQPSPFKGCDCIGRCSDSKKCSCAVKN GGEIPYNRNGAIVEVKPLVYECGPHCKCPPSCYNRVSQHGIKVPLEIFKTNSRGWGVRAL TSIPSGTFICEYVGELLEDKEAEQRIGSDEYLFDIGQNYSDCSVNSSRQAEVSEVVEEGY TIDAAQYGNIGRFINHSCSPNLYAQSVLYDHEDKKMPHIMLFAADNIPPLAELSYHYNYS VDQVHDSKGNIKVKKCFCGSSECSGKNFHCNLFVLLTLMFAFDRINMYLFVSISSFPIAK KVGYIVGKVHTDFAGKEKFAQGGS*

Transcript Sequence

Transcript ID	Solyc06g060960.2.1
Transcript Infomation	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 (AHRD V3.3 - W9S0E6_9ROSA)
Sequence	GGCTGAATTGCAAATATAAAGTGCCCCTATTTATTCTCAATATCTCCGTCTTTCGCCCAG ACAAACTAAGAAAACCAAACCGTTACAGAGACCAGGTAAGCAGACCATTTCCATCCATTT ATCCCTAATTTCTTGCTTCCGCCATGCAAACCCACTTTCAAATTCATTGATAATCAGAAG CCCTTCAAATTTGAATTTCATTTCTGGCTCTACAAATCCATTGCTAAAAACTAGGACTTT AACTTTATATCTAAAGTTATCTGAAGGGCAGGTTTGAAGTTCATTCTTAAAATTGGTATG ATTTATTGGACTGAGTTGGACATAAATTCAACAATATGGATGGTGATGATTCATATAGAA AATGAGTTCTTTTGCAGAATGATTTCTATCATACTAAATACTGATCTTTTAGGCCAAAGG AGAAATAGATATCAAATGTCGTCTTTTCAGTTTCAGGATTCTAACGTGTCAAAAGATGGG TTATCCAATAAAAGCGTGAAGAAGCGGCTGTTGGAAAATGGTTGCCACTCCTCATATTTG GGTATTATACCAAAATATAAAATTCGAAAAGTCTCAGCAGTGCGAGATTTTCCTCCAGGG TGTGGTAGAACTTCTCTGAAAGTTGATTTGAATCATGTGCAAAATGCTGAAGTGTCCACC AATATTGAAGACATGACTAACATTATATTGGTCGATGGTGTTAAAGAGACTAACATTGAG GTTAAATCACAGTCTGTTGAGGTTGTGAACGATCTAATTAACTTGGAAAATCAAGAAAAT GTGGATAGGCTAGCAGGGGAAGTGATGGCGACAAACATGAGTGCAATTGCAAATGGGGTA GGAGAAAAAATAAGTGATGAAAAATCGACTGGATTTGAGTTACCCAAAGATCTCAAAACT AGTGAAATGGAGCTTTCCAAGGAAACAGAAGACATTCAGAATGACACATCAGTGAAGGAA GTTGATGAGCAGGGTTTACCTTTGGTTGAAAGTATTAATGGTGGGCACATGACACAGAAG CTAATCAGTGTTATGGAACATACATCCACCTCGCCAAAGAATAAGTACCGCAAAAGAAGA GTATCTGCTGTTCGAGACTTCCCTCCATTTTGTGGAACAAAGGTTCCTAAGTCAACTGAG CAGAATTGTTTCGGTGTTACTGAAGAAAGCAAGGATGTGGCTGGATTCGGTAAGGCAGTC ACAAGGAATGAAGTAATTGAGACATTGAGAGAGGTTACAGAAACTGGGGCATTGCCAGAG AAGTTGATTGGAAGCGAGGATGCTGATTCTCTGAAAGATAGAGACGTTTCTAGTCCAAAA GATAGGCAGTTGGAACAAATCACAATGGTCCGGACTGAAGAACAGGAAGGCGTCCAATGT GATTATGATGGAAGAAGTCAGGTGGAAAGAACTGTGGTTATGCCTGAGATAATGACGAAA AAAGGGAGTGATGCAGGACCTGTGGGGAAGGAGACCCTGGTTTATTCAGAGAACGAAAGG GAAAAGTTAACTTCTGCAAGTAGTGCTCTTGGTTCTGGAAATGAAAAGCAGATTACAAAA GGTGCTAAGCCATCTGGTGCACGGAAACAAGGGAAGCAAAAGAGTCTAGACGACCCTGTG AGTGGAAATGAAATTGTTGTCTCACAGGTCGAAAGTCATTTGACAAAGACTGCAGTCAAC GCTTTTGGTTCTGGGCATGAAATAGTTAAGCCAATTGTGCAAGGTCTGATGGCCAAGCCA TGCTGTCCATGGAGGCAGGGAGAGCCAACTAGTTTAGATTGTGGAAACCAAGTTGAGAAG GATGATTTTTCTGGGCGCAAGAAGGCCAAAGCTGTTACCAGAAAAAGTAATCCTAGAGGT AAGAAAAAATCAGTTACTCTTGGTGAAGCTACTGATGGACTTTCAAGTGCATTAGTTGTG TTCAATGACAAAGGGCCTGGTTTGTGGGCTACGAGCAATGACGGAGCTTGCAGTTTGAAT AGAGAAGCTGTACATGAAGATTCTCCCGTTCGACGAGGACAATGTGATTTTGATGTGACC CTACCACCTTTTGGTCCAAACAGTTCCAGTCATGGTGATGCCCGTACTAAAGTTAGAGAG ACTCTTCGTCTGTTTCAGGGTATATGTAGAAAGCTTTTGCAAGGTGAAGAATCAAAGTCA AAACCTGAAGAAGCAAAATCGAAGCAGGGACCAAACAGAATTGATCTTCATGCAGCAAAA ATCATCAAAGAAAAAGGAAAAGAAGTTAACACGGGTCAGCACATACTGGGTGAAGTTCCC GGAGTTGAAGTAGGGGATGAGTTCCAATACAGGGTGGAACTTGCTATTGTGGGGGTTCAT CGCCTGTATCAGGCTGGTATAGATTACATGAAGCAAGGAGGTATGCTAATCGCGATTAGT ATTGTTTCTTCAGGGGTCTATGATGACGGTCTGGAAGATGCTGATGTGTTGATTTATTCT GGGCAAGGTGGAAATGTGGTGGGTAAGTCCAAAACCCCTGAGGATCAGAAACTGGAAAGA GGTAATTTAGCTTTGAAGAATAGTATATCAGTAAAGAATCCTGTTCGGGTGATTCGTGGC TCTAAGGAGACTAAGAACTCCGACTCTGTGGATGGTAAAGGTAAGTTAGTGACAACATAT GTTTATGATGGGTTGTACACTGTTGAGAATTATTGGACAGAACAAGGGACAAAGGGTAAG ATGGTTTTTATGTTTAAATTGGTGAGAGTTCCTGGGCAACCAGAGCTTGCTTGGAAAGAA GTAAAGTCATCGAGAAAGTCCAAAGTACGGCATGGTGTTTGTGTCCACGACATTACAGAT GGAAAGGAGACATTCGCGATAAGTGCTGTGAATACAATTGATGGTGAGAAACCTCCACCA TTCAATTACATCCAGAAGATTATATATCCTGACTGGTTCCAGCCTTCTCCTTTTAAAGGT TGTGATTGTATTGGGAGATGTTCTGATTCCAAGAAGTGCTCATGTGCAGTTAAAAATGGT GGTGAGATCCCATACAACCGTAATGGGGCTATTGTTGAAGTGAAGCCTCTTGTATATGAA TGTGGTCCTCATTGTAAATGTCCCCCTTCTTGTTACAATAGAGTCAGCCAACATGGTATT AAAGTTCCACTCGAGATCTTTAAGACAAATTCAAGGGGCTGGGGTGTGAGAGCTCTTACA TCTATTCCTTCAGGAACCTTTATATGTGAGTATGTAGGAGAACTTCTTGAAGACAAGGAA GCTGAACAAAGAATTGGCAGTGATGAGTACCTTTTTGATATTGGGCAGAACTATAGTGAT TGTTCTGTGAACTCTTCCAGGCAGGCAGAAGTAAGTGAGGTAGTAGAAGAGGGTTATACA ATTGATGCAGCTCAGTATGGAAATATCGGGCGATTTATCAATCACAGTTGCTCACCCAAT TTGTATGCACAAAGCGTTCTTTATGATCATGAAGATAAGAAAATGCCTCATATCATGCTT TTTGCAGCAGATAACATTCCTCCTTTGGCGGAGCTCAGTTATCATTACAATTATTCCGTG GATCAGGTACATGACTCCAAGGGCAATATCAAGGTGAAGAAATGCTTTTGTGGATCTTCA GAGTGTAGTGGTAAGAATTTTCACTGCAATTTATTCGTCCTCCTTACTTTGATGTTTGCA TTTGATCGGATTAATATGTACTTGTTTGTATCTATCTCTTCTTTCCCTATTGCAAAGAAA GTCGGCTACATTGTGGGTAAGGTGCATACAGATTTTGCTGGGAAAGAGAAATTTGCTCAG GGAGGCTCATAAGCTTCGTTAATCAAGACTATGATTTTGCATTTATATTAGACTACTTGT TG