Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g060850.3.1
CDS Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4C6R5_SOLLC)
Sequence

ATGGCGGAAAGCACAGGCTCTAAGAAGAGATGGCTTCCTCTTGAAGCTAACCCGGATGTC
ATGAATCAGTTTCTTTGGGGTCTTGGTGTTCCACCGAATGAGGCAGAGTGCTGTGATGTT
TATGGGTTAGATGAAGAACTTCTGGAGATGGTGCCAAAGCCAGTGCTTGCTGTTTTATTT
CTTTATCCTCTCACATCGCAGAGTGAAGAAGAGAGAATGAAGCAAGATAATGAAACAAAG
GTGCAGGATCCCAGTAGTACAGTTTACTACATGAAACAAACAGTGGGAAATGCATGTGGA
ACAATTGGTCTTCTTCACGCTATTGGGAATATCACCTCTCAGATAAAACTTACCGAGGGT
TCATTCTTGGACAAGTTCTTTAAATCAACTTCAAGCATGGACCCAATGCAGCGTGCTTTG
TTCCTTGAAAACGATAGGGAAATGGAAGTTGCTCATTCAGTGGCAGCCACTGCTGGTGAT
ACTGAGGCTACCGACGATGTGAACACTCATTTCATCTGCTTCTCCTGTGTTGATGGACAA
CTCTATGAACTTGATGGGAGGAGGGCAGGACCTATTACACATGGTGCATCCTCTCCAAAC
AGCTTATTAAAGGATGCAGCCACAGTTATCAAAAAGATAATCGAGCAAAATCCAGACTCA
ATCAACTTTAACGTCATTGCTATTTCGAAAAACGTTTAG

Peptide Sequence

PEP ID

Solyc06g060850.3.1
PEP Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4C6R5_SOLLC)
Sequence

MAESTGSKKRWLPLEANPDVMNQFLWGLGVPPNEAECCDVYGLDEELLEMVPKPVLAVLF
LYPLTSQSEEERMKQDNETKVQDPSSTVYYMKQTVGNACGTIGLLHAIGNITSQIKLTEG
SFLDKFFKSTSSMDPMQRALFLENDREMEVAHSVAATAGDTEATDDVNTHFICFSCVDGQ
LYELDGRRAGPITHGASSPNSLLKDAATVIKKIIEQNPDSINFNVIAISKNV*

Transcript Sequence

Transcript ID

Solyc06g060850.3.1
Transcript Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4C6R5_SOLLC)
Sequence

ATAAATCCCTTCCCATAACTATATATATATATAATAAAGGGGAGAAGGGCATCAAGGTTG
AGAGAGTAAAATAAAAGTCTAAATTGCTAAAGAAAGAAGAAAAGAATCCATGGCGGAAAG
CACAGGCTCTAAGAAGAGATGGCTTCCTCTTGAAGCTAACCCGGATGTCATGAATCAGTT
TCTTTGGGGTCTTGGTGTTCCACCGAATGAGGCAGAGTGCTGTGATGTTTATGGGTTAGA
TGAAGAACTTCTGGAGATGGTGCCAAAGCCAGTGCTTGCTGTTTTATTTCTTTATCCTCT
CACATCGCAGAGTGAAGAAGAGAGAATGAAGCAAGATAATGAAACAAAGGTGCAGGATCC
CAGTAGTACAGTTTACTACATGAAACAAACAGTGGGAAATGCATGTGGAACAATTGGTCT
TCTTCACGCTATTGGGAATATCACCTCTCAGATAAAACTTACCGAGGGTTCATTCTTGGA
CAAGTTCTTTAAATCAACTTCAAGCATGGACCCAATGCAGCGTGCTTTGTTCCTTGAAAA
CGATAGGGAAATGGAAGTTGCTCATTCAGTGGCAGCCACTGCTGGTGATACTGAGGCTAC
CGACGATGTGAACACTCATTTCATCTGCTTCTCCTGTGTTGATGGACAACTCTATGAACT
TGATGGGAGGAGGGCAGGACCTATTACACATGGTGCATCCTCTCCAAACAGCTTATTAAA
GGATGCAGCCACAGTTATCAAAAAGATAATCGAGCAAAATCCAGACTCAATCAACTTTAA
CGTCATTGCTATTTCGAAAAACGTTTAGACCAATGCTGCTGTCTAAGAGGCTTTTATGGA
TGAGATGTTTAAACCAATTTTAGCTTTTCATGTTTCTGCCTTTTCCAGTACAATGTTTCG
TCTTGTTTGTAAGGCACATATATCTGTGCAGTAAGTTACTTTCGAGAAATTACTACTACT
ACAATTGGTGAATAACTATGATTGCAGTAATTTCACCATCGCCAATAATTTTGCTAGAAG
GTGGCCTCTTTTCGGGGTGTGCCAAAAATGATTTATTGTGCCAGAGTATGGCACCGTTTT
CAACTAAAAGCTTAAAGGAAGCAATGAACTAACATAGATTTGGGTATTTTAATAACAGAC
TCGTTAAATAGTAAATCAAGTTACAGAACCATTGATAACCAACAACATTCCCACATTCTC
AGAAACTATTAAACGGTAAAATACTTGCATAAGAAAAGAAAAAAAGAGCTCCTGAATGTC
CGTCTCTTCAACTCTTAATCTGCTGCTGTGCTTGGTGCCCCAACTGCTCCGCCTTCTCTT
TTACATCATTTGCCGCATGTGCAATCTTATCCCTCGCGTAATCGATCTTGGTTGCTCCAA
TGGGGTGTTTCCCGGTGACATATCTGTACATCCAGTAGAAAACAAAAGAAGCAGTAGCTC
CAAAACCACCAGAAGCCAAAAACCCACCAAGGATCAACCCAATGGTTATCACAGCAGGTA
CCAAAACAGGGCTAAAAATCACCAGCAAAGGGGTAGCTATAGCTAGACCGATAACGGTAG
CCGCCAGCATTAACCCAGAAAGCACCATGAGTGAACCACCCACAGTGACAGCAGTGGTGG
TCTTGGC