Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g060620.3.1
CDS Infomation

Nitrate transporter (AHRD V3.3 *** Q852P7_TOBAC)
Sequence

ATGATTTTAGGTGTCGAAGCTGTGGAGAGGCTAGTAACGCTAGGCATTGCTGTGAACTTG
GTGGTGTACTTGACTAAAACAATGCATTTAGGGAATGCTAGCGCTGCCAACATTGTTACG
AACTTTATGGGAACTTCCTATATACTCACTTTGCTTGGTGGCTACGTTGCTGACACTTTC
CTCGGAAGGTATCTTACCGTTGGCATCGGAGCCACTGTTCAAGCAATAGGTGTAACAATT
TTAACAATCTCGACCATAGTTCCAAGCTTACGACCTCCAAAATGTGATCTCGGTAGCCCA
TCCTGCATCCCTGCAGACGGCAAACAACTGGCCGTCCTCTTCATCGCCCTCTACATGACA
GCCCTAGGCACTGGATTTCTGAAATCCAGTGTCTCGGGCTTTGGGACGGACCAATTTGAT
GAGTCCGACCCGAAGGAAAAAGGACGGATGATTAAATTCTTCAGTTGGTTTTTTTTCCTA
ATCAATGTTGGAGCACTTACTGCTGTAACCGTACTGGTGTACATTCAAGATAAAGTTGGA
AGGAAATTCGGGTATGGAATTTGTGCGTGCGCCATTTTAGTTGGCCTTGTGTTTTTCTTG
TGCGGTACGAAAAGGTACCGGTTCAAGAAACTCGTTGGGAGTCCGTTATCGCAGTTTGCT
TCGGTATTTATTGCTGCCTGGAGAAAACGGCATATGAATTTACCGTCAGATTCTTCCGTT
TTGTTCAATATTGATGATATCATTGGAGATGAAAACGTTAAAGACAAACAAAAGTTGCCT
CATAGCAAGGAATTCCGTTTCTTGGATAAAGCAGCTATTAAAGATTGTTCTAGTGAATTT
TCTGGGACAGCAATATTGAATAATTGGAAGTTAGCAACTTTAACAGATGTCGAAGAAGTT
AAATTGGTAATTAGAATGTTACCAACATGGGGTACGTCCATTATGTTTTGGACTGTTTAT
GCTCAAATGACAACATTTTCTGTTTCACAAGCTACAACTATGGATCGTCACATCGGTAAA
TCCTTTGAAATTCCTCCGGCTTCACTCACCGCGTTTTTCGTTGCAAGTGTCATGTTGGTT
ATTATTTTCTACGATAGGGTTATTGTACCCTTATGCGCCCGGTACATGAACAGTCCACAT
GGCTTCACTCCTCTGACACGTATTGCAATAGGGTTAGTTACGTCTATTTTCGCGATGATT
GCAGCTGCTTTAACTGAGATAAAGAGATTAAACGTTGCTAAGTCTCACGGATTGATTAAC
AATCCGAACGCGGTGATTCCGATGAGTGTGTTTTGGTTGGTGCCACAATTCTTACTTGTT
GGAGGAGGTGAAGCTTTTACATATATTGGACAACTTGATTTTTTCTTAAGAGAGTGTCCA
AAAGGGATGAAAACTATGAGTACTGGCTTATTTATAAGCACGATTTCGCTTGGATTTTTC
TTTAGTTCGATTTTAGTATCGATCGTAGATAAGGTGACCGCGAAATCAAGGCCGTGGCTA
GCTGATAATCTAAACCAAGGGAAACTATATAATTTCTATTGGCTTTTGGCCATTTTGAGT
GTATTGAACGTGATACTTTTTTTCTATTGTGCTAAACGTTACGTGTACAAGGAGAAGAGG
CTAGCTGAAGTGGGAATTCAAATGGAGGACTCGGGACCAGTTTGTCATTAA

Peptide Sequence

PEP ID

Solyc06g060620.3.1
PEP Infomation

Nitrate transporter (AHRD V3.3 *** Q852P7_TOBAC)
Sequence

MILGVEAVERLVTLGIAVNLVVYLTKTMHLGNASAANIVTNFMGTSYILTLLGGYVADTF
LGRYLTVGIGATVQAIGVTILTISTIVPSLRPPKCDLGSPSCIPADGKQLAVLFIALYMT
ALGTGFLKSSVSGFGTDQFDESDPKEKGRMIKFFSWFFFLINVGALTAVTVLVYIQDKVG
RKFGYGICACAILVGLVFFLCGTKRYRFKKLVGSPLSQFASVFIAAWRKRHMNLPSDSSV
LFNIDDIIGDENVKDKQKLPHSKEFRFLDKAAIKDCSSEFSGTAILNNWKLATLTDVEEV
KLVIRMLPTWGTSIMFWTVYAQMTTFSVSQATTMDRHIGKSFEIPPASLTAFFVASVMLV
IIFYDRVIVPLCARYMNSPHGFTPLTRIAIGLVTSIFAMIAAALTEIKRLNVAKSHGLIN
NPNAVIPMSVFWLVPQFLLVGGGEAFTYIGQLDFFLRECPKGMKTMSTGLFISTISLGFF
FSSILVSIVDKVTAKSRPWLADNLNQGKLYNFYWLLAILSVLNVILFFYCAKRYVYKEKR
LAEVGIQMEDSGPVCH*

Transcript Sequence

Transcript ID

Solyc06g060620.3.1
Transcript Infomation

Nitrate transporter (AHRD V3.3 *** Q852P7_TOBAC)
Sequence

GGAATCAATTCAGTCTGCCATAGTCTGAGTTTTACTACTCCTTTAAAATCTCCTACCATT
ATAGACCTCTCTTTTCCATCTCATTTCTCATAAGAAACATAAAAAATACAATAACCAATA
AAAAATGGCCCTTCCACACACACAACAGGAAACAAAAGTTATTCCAGATGCCTGGGATTA
CAAAGGTAGACCTGCCCTTAGATCTACCTCTGGTGGTTGGGCTGGTGCCGCCATGATTTT
AGGTGTCGAAGCTGTGGAGAGGCTAGTAACGCTAGGCATTGCTGTGAACTTGGTGGTGTA
CTTGACTAAAACAATGCATTTAGGGAATGCTAGCGCTGCCAACATTGTTACGAACTTTAT
GGGAACTTCCTATATACTCACTTTGCTTGGTGGCTACGTTGCTGACACTTTCCTCGGAAG
GTATCTTACCGTTGGCATCGGAGCCACTGTTCAAGCAATAGGTGTAACAATTTTAACAAT
CTCGACCATAGTTCCAAGCTTACGACCTCCAAAATGTGATCTCGGTAGCCCATCCTGCAT
CCCTGCAGACGGCAAACAACTGGCCGTCCTCTTCATCGCCCTCTACATGACAGCCCTAGG
CACTGGATTTCTGAAATCCAGTGTCTCGGGCTTTGGGACGGACCAATTTGATGAGTCCGA
CCCGAAGGAAAAAGGACGGATGATTAAATTCTTCAGTTGGTTTTTTTTCCTAATCAATGT
TGGAGCACTTACTGCTGTAACCGTACTGGTGTACATTCAAGATAAAGTTGGAAGGAAATT
CGGGTATGGAATTTGTGCGTGCGCCATTTTAGTTGGCCTTGTGTTTTTCTTGTGCGGTAC
GAAAAGGTACCGGTTCAAGAAACTCGTTGGGAGTCCGTTATCGCAGTTTGCTTCGGTATT
TATTGCTGCCTGGAGAAAACGGCATATGAATTTACCGTCAGATTCTTCCGTTTTGTTCAA
TATTGATGATATCATTGGAGATGAAAACGTTAAAGACAAACAAAAGTTGCCTCATAGCAA
GGAATTCCGTTTCTTGGATAAAGCAGCTATTAAAGATTGTTCTAGTGAATTTTCTGGGAC
AGCAATATTGAATAATTGGAAGTTAGCAACTTTAACAGATGTCGAAGAAGTTAAATTGGT
AATTAGAATGTTACCAACATGGGGTACGTCCATTATGTTTTGGACTGTTTATGCTCAAAT
GACAACATTTTCTGTTTCACAAGCTACAACTATGGATCGTCACATCGGTAAATCCTTTGA
AATTCCTCCGGCTTCACTCACCGCGTTTTTCGTTGCAAGTGTCATGTTGGTTATTATTTT
CTACGATAGGGTTATTGTACCCTTATGCGCCCGGTACATGAACAGTCCACATGGCTTCAC
TCCTCTGACACGTATTGCAATAGGGTTAGTTACGTCTATTTTCGCGATGATTGCAGCTGC
TTTAACTGAGATAAAGAGATTAAACGTTGCTAAGTCTCACGGATTGATTAACAATCCGAA
CGCGGTGATTCCGATGAGTGTGTTTTGGTTGGTGCCACAATTCTTACTTGTTGGAGGAGG
TGAAGCTTTTACATATATTGGACAACTTGATTTTTTCTTAAGAGAGTGTCCAAAAGGGAT
GAAAACTATGAGTACTGGCTTATTTATAAGCACGATTTCGCTTGGATTTTTCTTTAGTTC
GATTTTAGTATCGATCGTAGATAAGGTGACCGCGAAATCAAGGCCGTGGCTAGCTGATAA
TCTAAACCAAGGGAAACTATATAATTTCTATTGGCTTTTGGCCATTTTGAGTGTATTGAA
CGTGATACTTTTTTTCTATTGTGCTAAACGTTACGTGTACAAGGAGAAGAGGCTAGCTGA
AGTGGGAATTCAAATGGAGGACTCGGGACCAGTTTGTCATTAAGTAAATAGAAAGAAGAA
AAAAAAAAGCTATCAATGCAGTACTTCATTAGCATAGCCAGTTTTTTTTTTTTTTTTTTT
ACTTTTGTGTGTGTTTGAGTTTCTTGTTGGGGTTTTATTTTAGTGGCAAAAGTACCATAG
AAAAAGTGGGTTCAAAGGACCCGTTGTCTTTGGCTCAAGCCTACTATATAGTTTGTATGT
AGAAAATAATGTACTATATATGAAAGATGATCTGAACCCACTGCTTCAAAGAAGCAGTGG
TTTGGTAGCACTATAA