Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g060320.3.1
CDS Infomation	Filament-like plant protein (AHRD V3.3 *** FPP_SOLLC)
Sequence	ATGGACAAGAGGAATTGGTTATGGAAACGGCGATCTTCTGAGAAGAGCATGGGTGAAACT GAGAGTTCTGGTTCATTGTCTTCACATTCAGAGAGACATTCTGATGAGCAGGATCCTTTA AAAGAAACTCCAGAAAATGACAACCAATCACCGGAAGTAACCTCAAAAGCTGTAACTATT GATCATGAAGCCAAGGGAAGTCCAAAGAAGTTGATAGAAAAGCTATCAGCTGCTCTAGTT AATGTTAGTGCAAAAGAAGACTTAGTTAAGCAGCATGCTAAAGTGGCAGAAGAAGCTGTT GCAGGTTGGGAAAAGGCAGAAAATGAGGTTGCAGTTCTAAAGCAGCAACTTGCGGCAGCT GTGCAGCAGAACTCGACTTTGGATGTTCGTGTCAACCATCTTAATGGTGCTCTCAAGGAA TGTGTCAGACAGCTGAGACAAGCTAGAGATGAGCAGGAGCAAAGTATTCAATATGCTGTG GTAGAGAAGGAAAAGGAATGGGCGTCTGAAAAAGCTGCACTTGAATATCAGCTACTTGAG CTTCAGACACAAGCAGAGGCTAGTAGAACTGGTTCTCTTGTTTTTACTGATCCAAATGTT CTGGTTAGGCTCGAGTGTCTAGAGAAGGAGAACACAGCTCTCAAACTTGACCTTTCATCT TGTTCAGAGGAGTTGCAAATTAGGACCACAGAGAGGGACTTGAGCAACCAAGCAGCTGAA ACTGCTAGTAAGCAGCAGTTAGAGAGCATAAAGAAGGTGACCAAGCTTGAAGCTGAGTGT CGAAGACTACAAGTCTTGGCTCGCAAATCATCCCTACTCAGTGACCAAAGATCTTATGCT ATTTCATCTTTCGCTGTTGAGTCCTTCACCAATAGCCAATCCAGTAGTGGAGATCGACTG AAGACAGTCGACACTGATAGCCACATGATGCGCAGACTGGAAACAAGTGAATGTGATCAA AGTTGCTCTGATTCGTGGGCATCAGGACTAATTGCTAAGCTCGATCAATTTCAGCACGAA AAAGCTATGCCTAAAACTCTTCCTGCCCGGTCTTTGGAAATTGACATGATGGATGACTTC TTGGAGATGGAGAGACTCGCTGCAGTATCTGAAACTGTGAATAAAGCCTCTTCACTTACA TCTGATGCTGTTGCCGGTGACTCATCAAGTGAAGAGAATCCTCTGGCAGCAGAATATGAG ACCCTTTCAAAAAGGGTGGTTGAATTAGAGCAAAAGCTGGAGAAGACTGAAGCAGATAAA GCTGAACTGGAAAATGCTTTAAGTGAGAGCCAAGATGCCCTCAAGGTGTCCGATTTGCAG CTTAAGGATGCTCAAATCAAGTTAGAAGAGCTGCTGAAGGAGCTAGATGCAGTGAATGAG TCAAAAGAATTGCTTGAGTTTCAACTCTTTGGCATGGAAGTAGAAGCACGGACAATGTCT GCAAACATTGATTCTTTAAAGACAGAAGTCGAAAAAGAACGATCATTGTCAACTGATAAG GAAACTAAGTGCCAGGAACTGGAAAATGAACTAAGAAGGAAATCCCAGGAATTTGAACTT CAGCAAGCTTCTAGTTCAAATGGGGAATCCAAAATAAAGCAGGAAGATTTAGCTGTAGCT GCTGACAAGCTTGCAGAATGCCAGAAAACAATTGCATCTCTTGGTAAGCAGCTTCATTCA CTAGCTACTTTAGAAGATTTCTTGATAGACACTGCAAATCTTCCTGGATTTTCTGGGGAA GGATCAGTTGTGGCTGGAGCTAGTGGAGAGGAGTGGAAGTTACATGTAAACGAGACATTT ACCCGAAACAGCAATTCAGACACTCCAAAAATTGAGAATTCTAGTCATTCTATGAAC

Peptide Sequence

PEP ID	Solyc06g060320.3.1
PEP Infomation	Filament-like plant protein (AHRD V3.3 *** FPP_SOLLC)
Sequence	MDKRNWLWKRRSSEKSMGETESSGSLSSHSERHSDEQDPLKETPENDNQSPEVTSKAVTI DHEAKGSPKKLIEKLSAALVNVSAKEDLVKQHAKVAEEAVAGWEKAENEVAVLKQQLAAA VQQNSTLDVRVNHLNGALKECVRQLRQARDEQEQSIQYAVVEKEKEWASEKAALEYQLLE LQTQAEASRTGSLVFTDPNVLVRLECLEKENTALKLDLSSCSEELQIRTTERDLSNQAAE TASKQQLESIKKVTKLEAECRRLQVLARKSSLLSDQRSYAISSFAVESFTNSQSSSGDRL KTVDTDSHMMRRLETSECDQSCSDSWASGLIAKLDQFQHEKAMPKTLPARSLEIDMMDDF LEMERLAAVSETVNKASSLTSDAVAGDSSSEENPLAAEYETLSKRVVELEQKLEKTEADK AELENALSESQDALKVSDLQLKDAQIKLEELLKELDAVNESKELLEFQLFGMEVEARTMS ANIDSLKTEVEKERSLSTDKETKCQELENELRRKSQEFELQQASSSNGESKIKQEDLAVA ADKLAECQKTIASLGKQLHSLATLEDFLIDTANLPGFSGEGSVVAGASGEEWKLHVNETF TRNSNSDTPKIENSSHSMN

Transcript Sequence

Transcript ID	Solyc06g060320.3.1
Transcript Infomation	Filament-like plant protein (AHRD V3.3 *** FPP_SOLLC)
Sequence	ATGGACAAGAGGAATTGGTTATGGAAACGGCGATCTTCTGAGAAGAGCATGGGTGAAACT GAGAGTTCTGGTTCATTGTCTTCACATTCAGAGAGACATTCTGATGAGCAGGATCCTTTA AAAGAAACTCCAGAAAATGACAACCAATCACCGGAAGTAACCTCAAAAGCTGTAACTATT GATCATGAAGCCAAGGGAAGTCCAAAGAAGTTGATAGAAAAGCTATCAGCTGCTCTAGTT AATGTTAGTGCAAAAGAAGACTTAGTTAAGCAGCATGCTAAAGTGGCAGAAGAAGCTGTT GCAGGTTGGGAAAAGGCAGAAAATGAGGTTGCAGTTCTAAAGCAGCAACTTGCGGCAGCT GTGCAGCAGAACTCGACTTTGGATGTTCGTGTCAACCATCTTAATGGTGCTCTCAAGGAA TGTGTCAGACAGCTGAGACAAGCTAGAGATGAGCAGGAGCAAAGTATTCAATATGCTGTG GTAGAGAAGGAAAAGGAATGGGCGTCTGAAAAAGCTGCACTTGAATATCAGCTACTTGAG CTTCAGACACAAGCAGAGGCTAGTAGAACTGGTTCTCTTGTTTTTACTGATCCAAATGTT CTGGTTAGGCTCGAGTGTCTAGAGAAGGAGAACACAGCTCTCAAACTTGACCTTTCATCT TGTTCAGAGGAGTTGCAAATTAGGACCACAGAGAGGGACTTGAGCAACCAAGCAGCTGAA ACTGCTAGTAAGCAGCAGTTAGAGAGCATAAAGAAGGTGACCAAGCTTGAAGCTGAGTGT CGAAGACTACAAGTCTTGGCTCGCAAATCATCCCTACTCAGTGACCAAAGATCTTATGCT ATTTCATCTTTCGCTGTTGAGTCCTTCACCAATAGCCAATCCAGTAGTGGAGATCGACTG AAGACAGTCGACACTGATAGCCACATGATGCGCAGACTGGAAACAAGTGAATGTGATCAA AGTTGCTCTGATTCGTGGGCATCAGGACTAATTGCTAAGCTCGATCAATTTCAGCACGAA AAAGCTATGCCTAAAACTCTTCCTGCCCGGTCTTTGGAAATTGACATGATGGATGACTTC TTGGAGATGGAGAGACTCGCTGCAGTATCTGAAACTGTGAATAAAGCCTCTTCACTTACA TCTGATGCTGTTGCCGGTGACTCATCAAGTGAAGAGAATCCTCTGGCAGCAGAATATGAG ACCCTTTCAAAAAGGGTGGTTGAATTAGAGCAAAAGCTGGAGAAGACTGAAGCAGATAAA GCTGAACTGGAAAATGCTTTAAGTGAGAGCCAAGATGCCCTCAAGGTGTCCGATTTGCAG CTTAAGGATGCTCAAATCAAGTTAGAAGAGCTGCTGAAGGAGCTAGATGCAGTGAATGAG TCAAAAGAATTGCTTGAGTTTCAACTCTTTGGCATGGAAGTAGAAGCACGGACAATGTCT GCAAACATTGATTCTTTAAAGACAGAAGTCGAAAAAGAACGATCATTGTCAACTGATAAG GAAACTAAGTGCCAGGAACTGGAAAATGAACTAAGAAGGAAATCCCAGGAATTTGAACTT CAGCAAGCTTCTAGTTCAAATGGGGAATCCAAAATAAAGCAGGAAGATTTAGCTGTAGCT GCTGACAAGCTTGCAGAATGCCAGAAAACAATTGCATCTCTTGGTAAGCAGCTTCATTCA CTAGCTACTTTAGAAGATTTCTTGATAGACACTGCAAATCTTCCTGGATTTTCTGGGGAA GGATCAGTTGTGGCTGGAGCTAGTGGAGAGGAGTGGAAGTTACATGTAAACGAGACATTT ACCCGAAACAGCAATTCAGACACTCCAAAAATTGAGAATTCTAGTCATTCTATGAAC