Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g060120.3.1
CDS Infomation

SWI/SNF complex subunit SWI3C (AHRD V3.3 *** A0A0B2RTB1_GLYSO)
Sequence

ATGCCAGCTTCCTCCTCAGAGACGAGGAATAGATGGAGGAAGAGAAAGCGGGAGCCATTA
ATTTCGAGGAAATCGAAGAACCAACATGATGATGACGGGTTTGAAGATGAGGAGGATGAG
GAAGACATTGAACAGCAGGAGATGGAAGATGAACATCAAAACCCTAACAATTCAGTGGAT
CGAAGTTACTCTTCTGTTGAGTTGGTGTCAGAAAGTAGGGACCGGATTAGTGAGTTTCCT
TTGGTAGTGAGACGAGCTGTGACTCGGCCTCATTCATCTGTGCTGAATATTGTGGCAACA
GAGAAGGCTGGGTTGAGTGGGGAGAGCAGACAGAATGGGTTGGTTTTGGAGAACATATCG
TATGGGCAGCTTCAGGCGCTTTCAGCTGTGCCTGTAGATAGTCACTCTTTGTTGACTGAG
GAAAGAGGCGGGGAAGGTAGTGGGAGTGGTTCATATGTCATCACTCCTCCGCAGATATTG
CCGGGGCGTGGTGTTATTAAGCATTATGGTACTGCAGGTCGAATCCATGTTGTGCCAATG
CACGCAGATTGGTTTTCACCTAATACCGTGCACAGATTGGAAAGACAAGTGGTGCCACAT
TTTTTCTCTGGGAAGTCAGCTGAACATACACCCGAAAAATACATGGAATGTAGAAATTGT
ATTGTTGCAAAGTACATGGAGTCTCCTGTAAAGCACTTGTCAGTTGATGATTGCCATGAA
ATAGTAGGTGGTATTAGTGCTGATGATGTAACTCGAATTGCAAGATTTCTTGATCATTGG
GGGATCATCAACTACTGTGCTGTTCCTCCTAAAGATGAGGCTCAAAAAGATGGCACATAT
TTGTATGAGGACACAAACGGTGATCTCTGTGTTCCAGCAGCTGGTTTGAAGTCTATTGAC
AGCTTAGTCCAATTTGACAAGCCTAAATGTCGGCTGAAGGCGAAAGATATTTATCCTGAA
CTTGAGCGTGACTGCGATGACGACTCTGATTTTGACAACTCAATCCGAGAAATCTTGTCT
GAAATTAGATGCAATTGTTGTTCTCGGCCTGTTTCACTAGCGCATTATCAGTCACAGAAA
GAGATGGATATTCTATTGTGTTTGGATTGCTTCCATGAGGGTAGGTTTATTGCTGGTCAC
TCTAGCTTGGATTTTGTCAAAGTGAGCTCTATGAAAGATTATGGAGATCTAGATGGAGAT
ACTTGGACGGACCAGGAAACACTATTGCTTCTTGAGGGAATGCAACTCTACAATGAAAAC
TGGAATCAAATTGCAGAACATGTTGGCACCAAGTCAAAGGCACAGTGCATCCTTCATTTT
GTCCGCCTGCCTTTGGATGGTGCCGCATTAGACAATATTGAACTTCCAGGTGCATCTGGT
CCCTCTAGTTCTAAGACAGGTGAAGATCGTAATAAATCTCATTCAACTTTGAATGGGAAT
CTTGCAGGACCAAGCACTGGAAACCTTGATTCTGATAGCAAATTTCCATTTGAGAACTGT
GGAAATCCAGTAATGTCCCTGGTTGCTTTTCTGGCATCTGCTGTTGGACCGAGAGTTGCT
GCAGCATGTGCCCATGCATCCTTGGCAGCTTTATCCAAGGATGATACTTTAACTGCATCA
CAGAACATGACTCAGATGGATGGATCCACAACAAATAATGGGATCAGTGTAGGAAGAATG
CCTGGAAAGAATGAAAGTCCTCATGGAGATGTTGGAAGTTCGTATCAGCGAAAAGATGAT
AAGGCAGCAGGACAAGGTCCATGGGGTCAACATGATGCTGGAGGGACTCCATTATCCACT
GAAAGTGTAAGAGCTGCTGCTAAAGTTGGTCTTGCAGCTGCAGCTGTAAAATCAAAGCTT
TTTGCTGACCATGAAGAACGTGAGATTCAGCGGTTATCTGCAAACATAGTCAACCATCAG
TTGAAGAGGTTAGAGCTGAAGCTGAAGCAGTTCGCTGAGGTGGAGACCTTGCTAATGAAA
GAATGTGAACAATTGGAGAGAACAAGGCAACGCTTTTTTGGAGAACGTGCTCGGATAATG
ACAACTCAACCTGGTTCGGTGCGTGTATCCCGACCAATGGGTGTGTCTGGTGCTGGTGCA
GCAGTGGTCAATAATACAGGAAATAGTAGGCAACAAGTTTCAGGTCCTCCACAACAAAAT
TTTATTGCTGGATATGGAAACAACCAACCGATGCACCCTCAAATGTCATTTATGCAGCAA
CAGGGAATTTATGGATTTGGGCCTCGGCTGCCACTCTCAGCGATTCACCCATCCTCTTCA
ACACCCAGCATGTTTAATGCACCAGCAAGTTCCCAGCCCGCTCTCAGTCATTCAATGCTT
AGACCTGTATCTGGGACAAAAACAGGTTTAGGTTGA

Peptide Sequence

PEP ID

Solyc06g060120.3.1
PEP Infomation

SWI/SNF complex subunit SWI3C (AHRD V3.3 *** A0A0B2RTB1_GLYSO)
Sequence

MPASSSETRNRWRKRKREPLISRKSKNQHDDDGFEDEEDEEDIEQQEMEDEHQNPNNSVD
RSYSSVELVSESRDRISEFPLVVRRAVTRPHSSVLNIVATEKAGLSGESRQNGLVLENIS
YGQLQALSAVPVDSHSLLTEERGGEGSGSGSYVITPPQILPGRGVIKHYGTAGRIHVVPM
HADWFSPNTVHRLERQVVPHFFSGKSAEHTPEKYMECRNCIVAKYMESPVKHLSVDDCHE
IVGGISADDVTRIARFLDHWGIINYCAVPPKDEAQKDGTYLYEDTNGDLCVPAAGLKSID
SLVQFDKPKCRLKAKDIYPELERDCDDDSDFDNSIREILSEIRCNCCSRPVSLAHYQSQK
EMDILLCLDCFHEGRFIAGHSSLDFVKVSSMKDYGDLDGDTWTDQETLLLLEGMQLYNEN
WNQIAEHVGTKSKAQCILHFVRLPLDGAALDNIELPGASGPSSSKTGEDRNKSHSTLNGN
LAGPSTGNLDSDSKFPFENCGNPVMSLVAFLASAVGPRVAAACAHASLAALSKDDTLTAS
QNMTQMDGSTTNNGISVGRMPGKNESPHGDVGSSYQRKDDKAAGQGPWGQHDAGGTPLST
ESVRAAAKVGLAAAAVKSKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVETLLMK
ECEQLERTRQRFFGERARIMTTQPGSVRVSRPMGVSGAGAAVVNNTGNSRQQVSGPPQQN
FIAGYGNNQPMHPQMSFMQQQGIYGFGPRLPLSAIHPSSSTPSMFNAPASSQPALSHSML
RPVSGTKTGLG*

Transcript Sequence

Transcript ID

Solyc06g060120.3.1
Transcript Infomation

SWI/SNF complex subunit SWI3C (AHRD V3.3 *** A0A0B2RTB1_GLYSO)
Sequence

GATTGTAAAAAAAAAAACAGCTGCGAAATTCCAAAAAAAGAGCTCAAAATTATCATCGCA
GCACCAGAGAGACAATCCAATCCCCCCTTTCCCCATTTTCCTCTCTGTGTTTCTCTCTCT
AAAACAACCAATCTCAAAGACCCCACAAATCTCTCCTTTAAACCCCTTCTTCCTCAGCAC
AACCAAAAACCCAATTTCTCACAGCAATGCCAGCTTCCTCCTCAGAGACGAGGAATAGAT
GGAGGAAGAGAAAGCGGGAGCCATTAATTTCGAGGAAATCGAAGAACCAACATGATGATG
ACGGGTTTGAAGATGAGGAGGATGAGGAAGACATTGAACAGCAGGAGATGGAAGATGAAC
ATCAAAACCCTAACAATTCAGTGGATCGAAGTTACTCTTCTGTTGAGTTGGTGTCAGAAA
GTAGGGACCGGATTAGTGAGTTTCCTTTGGTAGTGAGACGAGCTGTGACTCGGCCTCATT
CATCTGTGCTGAATATTGTGGCAACAGAGAAGGCTGGGTTGAGTGGGGAGAGCAGACAGA
ATGGGTTGGTTTTGGAGAACATATCGTATGGGCAGCTTCAGGCGCTTTCAGCTGTGCCTG
TAGATAGTCACTCTTTGTTGACTGAGGAAAGAGGCGGGGAAGGTAGTGGGAGTGGTTCAT
ATGTCATCACTCCTCCGCAGATATTGCCGGGGCGTGGTGTTATTAAGCATTATGGTACTG
CAGGTCGAATCCATGTTGTGCCAATGCACGCAGATTGGTTTTCACCTAATACCGTGCACA
GATTGGAAAGACAAGTGGTGCCACATTTTTTCTCTGGGAAGTCAGCTGAACATACACCCG
AAAAATACATGGAATGTAGAAATTGTATTGTTGCAAAGTACATGGAGTCTCCTGTAAAGC
ACTTGTCAGTTGATGATTGCCATGAAATAGTAGGTGGTATTAGTGCTGATGATGTAACTC
GAATTGCAAGATTTCTTGATCATTGGGGGATCATCAACTACTGTGCTGTTCCTCCTAAAG
ATGAGGCTCAAAAAGATGGCACATATTTGTATGAGGACACAAACGGTGATCTCTGTGTTC
CAGCAGCTGGTTTGAAGTCTATTGACAGCTTAGTCCAATTTGACAAGCCTAAATGTCGGC
TGAAGGCGAAAGATATTTATCCTGAACTTGAGCGTGACTGCGATGACGACTCTGATTTTG
ACAACTCAATCCGAGAAATCTTGTCTGAAATTAGATGCAATTGTTGTTCTCGGCCTGTTT
CACTAGCGCATTATCAGTCACAGAAAGAGATGGATATTCTATTGTGTTTGGATTGCTTCC
ATGAGGGTAGGTTTATTGCTGGTCACTCTAGCTTGGATTTTGTCAAAGTGAGCTCTATGA
AAGATTATGGAGATCTAGATGGAGATACTTGGACGGACCAGGAAACACTATTGCTTCTTG
AGGGAATGCAACTCTACAATGAAAACTGGAATCAAATTGCAGAACATGTTGGCACCAAGT
CAAAGGCACAGTGCATCCTTCATTTTGTCCGCCTGCCTTTGGATGGTGCCGCATTAGACA
ATATTGAACTTCCAGGTGCATCTGGTCCCTCTAGTTCTAAGACAGGTGAAGATCGTAATA
AATCTCATTCAACTTTGAATGGGAATCTTGCAGGACCAAGCACTGGAAACCTTGATTCTG
ATAGCAAATTTCCATTTGAGAACTGTGGAAATCCAGTAATGTCCCTGGTTGCTTTTCTGG
CATCTGCTGTTGGACCGAGAGTTGCTGCAGCATGTGCCCATGCATCCTTGGCAGCTTTAT
CCAAGGATGATACTTTAACTGCATCACAGAACATGACTCAGATGGATGGATCCACAACAA
ATAATGGGATCAGTGTAGGAAGAATGCCTGGAAAGAATGAAAGTCCTCATGGAGATGTTG
GAAGTTCGTATCAGCGAAAAGATGATAAGGCAGCAGGACAAGGTCCATGGGGTCAACATG
ATGCTGGAGGGACTCCATTATCCACTGAAAGTGTAAGAGCTGCTGCTAAAGTTGGTCTTG
CAGCTGCAGCTGTAAAATCAAAGCTTTTTGCTGACCATGAAGAACGTGAGATTCAGCGGT
TATCTGCAAACATAGTCAACCATCAGTTGAAGAGGTTAGAGCTGAAGCTGAAGCAGTTCG
CTGAGGTGGAGACCTTGCTAATGAAAGAATGTGAACAATTGGAGAGAACAAGGCAACGCT
TTTTTGGAGAACGTGCTCGGATAATGACAACTCAACCTGGTTCGGTGCGTGTATCCCGAC
CAATGGGTGTGTCTGGTGCTGGTGCAGCAGTGGTCAATAATACAGGAAATAGTAGGCAAC
AAGTTTCAGGTCCTCCACAACAAAATTTTATTGCTGGATATGGAAACAACCAACCGATGC
ACCCTCAAATGTCATTTATGCAGCAACAGGGAATTTATGGATTTGGGCCTCGGCTGCCAC
TCTCAGCGATTCACCCATCCTCTTCAACACCCAGCATGTTTAATGCACCAGCAAGTTCCC
AGCCCGCTCTCAGTCATTCAATGCTTAGACCTGTATCTGGGACAAAAACAGGTTTAGGTT
GAGTGCAGATAGTGATTGAGCTTTGGATTTGCTTCAGTTTACTGATCGGTTCTCTTCATT
TCTGCAATTATTGAGGCGAGAGAACAAGTTGCATTGCTCTGTCAGACGGATTGAGACATT
AATGAAGCCAATCGACTGAAGATGCAGCTCGGACTGACAGTGCAATGGCCTGATTACCCA
AGCAGGACTTCTCACATTAGTTGCTGCTTTATGCAGCTAAACTTATTCGTAGAAACAACT
TGTACTATATTTCGGTTTCTACTGTGACATGACTCTCTTTTGGTAACAAGAAGTATGAGA
CTAGGGGTCTAGACATGTAGTTTTGTGCAGTACAGGTAATTAAGATGGAGAAAACAGGGC
AATGGAGTATGGCAGTTTCTTTGATCATACAAGTCGTGTAACTAAATTGTTGTGCTGATT
TCCTACATTTGTAACCGATTTCTCAAGTAATTTAACTAAGCTTTGAGGGTTAAAACCAAA
CGCAACTACCCAAACAAGTTTGGTTCTGCTAAACGGTTCTTCAAAACATCAAACTTGTTC
AACTTTAGGAAGCTTAACTGAAGTCATTTCATAGCCAAATATGA