Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g059885.1.1
CDS Infomation

Germacrene synthase (AHRD V3.3 *** G1JUH6_SOLLC)
Sequence

ATGGCTGCTTCTTCTGCTGATAAGTGTCGCCCCTTGGCTAATTTTCACCCATCTGTTTGG
GGATATCATTTCCTTTCTTATACTCATGAAATTACTAATCAAGAAAAAGTTGAAGTTGAT
GAGTACAAAGAGACAATTAGAAAAATGCTGGTGGAAACTTGCGACAATAGCACTCAAAAG
CTTGTGTTGATAGACGCGATGCAACGATTGGGAGTGGCTTATCATTTCGATAATGAAATT
GAAACATCCATTCAAAACATTTTTGATGCATCGTCCAAACAGAATGATAATGACAACAAC
CTTTACGTTGTGTCTCTTCGTTTTCGACTTGTGAGGCAACAAGGCCATTACATGTCTTCA
GATGTGTTCAAGCAATTCACCAACCAAGATGGGAAATTCAAGGAAACACTTACTAATGAT
GTCCAAGGATTATTGAGTTTGTATGAAGCATCACATCTGAGAGTGCGTAATGAGGAGATT
CTTGAAGAAGCTCTTACATTTACCACCACTCATCTCGAGTCTATTGTCTCCAACTTGAGC
AATAATAATAACTCTCTTAAGGTTGAAGTTGGTGAAGCCTTAACTCAGCCTATTCGCATG
ACTTTACCAAGGATGGGAGCTAGAAAATACATATCCATTTACGAAAACAATGATGCACAC
CACCATTTGCTTTTGAAATTTGCTAAATTGGATTTTAACATGCTGCAAAAGTTTCACCAA
AGAGAGCTTAGTGATCTTACAAGGTGGTGGAAAGATTTGGATTTTGCAAATAAATATCCA
TATGCAAGAGACAGGTTGGTTGAGTGTTACTTCTGGATATTAGGAGTGTATTTTGAGCCA
AAATATAGTCGTGCGAGAAAAATGATGACAAAAGTACTCAACCTGACCTCCATTATTGAC
GACACTTTTGATGCTTATGCAACCTTTGACGAACTTGTGACTTTCAATGATGCAATCCAG
AGATGGGATGCTAATGCAATTGATTCAATACAACCATATATGAGACCTGCTTATCAAGCT
CTTCTAGACATTTACAGTGAAATGGAACAAGTGTTGTCCAAAGAAGGTAAACTGGACCGT
GTATACTATGCAAAAAATGAGATGAAAAAGTTGGTGAGAGCCTATTTTAAGGAAACCCAA
TGGTTGAATGATTGTGACCATATTCCAAAATATGAGGAACAAGTGGAGAATGCAATCGTA
AGTGCTGGCTATATGATGATATCAACAACTTGCTTGGTCGGTATAGAAGAATTTATATCC
CACGAGACTTTTGAATGGTTGATGAATGAGTCTGTGATTGTTCGAGCTTCCGCATTGATT
GCCAGAGCAATGAACGATATTGTTGGACATGAAGATGAACAAGAAAGAGGACATGTAGCT
TCACTTATTGAATGTTACATGAAAGATTATGGAGCTTCAAAGCAAGAGACTTACATTAAG
TTCCTGAAAGAGGTCACCAATGCATGGAAGGACATAAACAAACAATTCTTCCGTCCAACT
GAAGTACCAATGTTTGTCCTTGAACGAGTTCTAAATTTGACACGTGTGGCTGACACGTTA
TATAAAGAGAAAGATACATATACAAACGCCAAAGGAAAACTTAAAAACATGATTAATTCA
ATACTAATTGAATCTGTCAAAATATAA

Peptide Sequence

PEP ID

Solyc06g059885.1.1
PEP Infomation

Germacrene synthase (AHRD V3.3 *** G1JUH6_SOLLC)
Sequence

MAASSADKCRPLANFHPSVWGYHFLSYTHEITNQEKVEVDEYKETIRKMLVETCDNSTQK
LVLIDAMQRLGVAYHFDNEIETSIQNIFDASSKQNDNDNNLYVVSLRFRLVRQQGHYMSS
DVFKQFTNQDGKFKETLTNDVQGLLSLYEASHLRVRNEEILEEALTFTTTHLESIVSNLS
NNNNSLKVEVGEALTQPIRMTLPRMGARKYISIYENNDAHHHLLLKFAKLDFNMLQKFHQ
RELSDLTRWWKDLDFANKYPYARDRLVECYFWILGVYFEPKYSRARKMMTKVLNLTSIID
DTFDAYATFDELVTFNDAIQRWDANAIDSIQPYMRPAYQALLDIYSEMEQVLSKEGKLDR
VYYAKNEMKKLVRAYFKETQWLNDCDHIPKYEEQVENAIVSAGYMMISTTCLVGIEEFIS
HETFEWLMNESVIVRASALIARAMNDIVGHEDEQERGHVASLIECYMKDYGASKQETYIK
FLKEVTNAWKDINKQFFRPTEVPMFVLERVLNLTRVADTLYKEKDTYTNAKGKLKNMINS
ILIESVKI*

Transcript Sequence

Transcript ID

Solyc06g059885.1.1
Transcript Infomation

Germacrene synthase (AHRD V3.3 *** G1JUH6_SOLLC)
Sequence

AAACCCACAAATTAAGCTTGAAAAAAAGCAAACCTTAGAACAAACAAGCAATGGCTGCTT
CTTCTGCTGATAAGTGTCGCCCCTTGGCTAATTTTCACCCATCTGTTTGGGGATATCATT
TCCTTTCTTATACTCATGAAATTACTAATCAAGAAAAAGTTGAAGTTGATGAGTACAAAG
AGACAATTAGAAAAATGCTGGTGGAAACTTGCGACAATAGCACTCAAAAGCTTGTGTTGA
TAGACGCGATGCAACGATTGGGAGTGGCTTATCATTTCGATAATGAAATTGAAACATCCA
TTCAAAACATTTTTGATGCATCGTCCAAACAGAATGATAATGACAACAACCTTTACGTTG
TGTCTCTTCGTTTTCGACTTGTGAGGCAACAAGGCCATTACATGTCTTCAGATGTGTTCA
AGCAATTCACCAACCAAGATGGGAAATTCAAGGAAACACTTACTAATGATGTCCAAGGAT
TATTGAGTTTGTATGAAGCATCACATCTGAGAGTGCGTAATGAGGAGATTCTTGAAGAAG
CTCTTACATTTACCACCACTCATCTCGAGTCTATTGTCTCCAACTTGAGCAATAATAATA
ACTCTCTTAAGGTTGAAGTTGGTGAAGCCTTAACTCAGCCTATTCGCATGACTTTACCAA
GGATGGGAGCTAGAAAATACATATCCATTTACGAAAACAATGATGCACACCACCATTTGC
TTTTGAAATTTGCTAAATTGGATTTTAACATGCTGCAAAAGTTTCACCAAAGAGAGCTTA
GTGATCTTACAAGGTGGTGGAAAGATTTGGATTTTGCAAATAAATATCCATATGCAAGAG
ACAGGTTGGTTGAGTGTTACTTCTGGATATTAGGAGTGTATTTTGAGCCAAAATATAGTC
GTGCGAGAAAAATGATGACAAAAGTACTCAACCTGACCTCCATTATTGACGACACTTTTG
ATGCTTATGCAACCTTTGACGAACTTGTGACTTTCAATGATGCAATCCAGAGATGGGATG
CTAATGCAATTGATTCAATACAACCATATATGAGACCTGCTTATCAAGCTCTTCTAGACA
TTTACAGTGAAATGGAACAAGTGTTGTCCAAAGAAGGTAAACTGGACCGTGTATACTATG
CAAAAAATGAGATGAAAAAGTTGGTGAGAGCCTATTTTAAGGAAACCCAATGGTTGAATG
ATTGTGACCATATTCCAAAATATGAGGAACAAGTGGAGAATGCAATCGTAAGTGCTGGCT
ATATGATGATATCAACAACTTGCTTGGTCGGTATAGAAGAATTTATATCCCACGAGACTT
TTGAATGGTTGATGAATGAGTCTGTGATTGTTCGAGCTTCCGCATTGATTGCCAGAGCAA
TGAACGATATTGTTGGACATGAAGATGAACAAGAAAGAGGACATGTAGCTTCACTTATTG
AATGTTACATGAAAGATTATGGAGCTTCAAAGCAAGAGACTTACATTAAGTTCCTGAAAG
AGGTCACCAATGCATGGAAGGACATAAACAAACAATTCTTCCGTCCAACTGAAGTACCAA
TGTTTGTCCTTGAACGAGTTCTAAATTTGACACGTGTGGCTGACACGTTATATAAAGAGA
AAGATACATATACAAACGCCAAAGGAAAACTTAAAAACATGATTAATTCAATACTAATTG
AATCTGTCAAAATATAAATATAATGCTGAAATTGCACCTTCATCATTCAACTATTCACAG
CAAAATAAGGCATATAATAAATTGAAGACTCACAACATATGAGTTGTTAATTCCTGGGAT
GTTTGAAATAAACAATAATTGTTTTTATTTAATTTGCTAAGCAAAAGTGAAATATACAAC
ACTTGAGTTGTATTAAATCATGTTTTATCTCATTTCCAGCTTGTGAGTTTGGATTATTAT
ATTGTTAATTATCATCACTTTATAATGTACTGT