Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g059860.3.1
CDS Infomation

patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.1)
Sequence

ATGTTTGATCCAAGAAAACAAATACCCAATTTTCATAATCCTGTCACAACCTTTAATGAC
ACTAATTGGGAACCTCACAATTTTGATTTCCATGTGTCACAAAAACATGGAAACATTCAA
TCTAAAGATCAAAAAATTGAAGATGATGATGAATCTGGTGCTTCATCACCAGCCTTATGG
CAAAATAGTCCATCAAGAAGTCCAATAAATTATCGATCACTTTCGCCGAATTCTAGAACT
CAAGCTATAGCTAGAGGGCAATGGGAACTTATGGAAATGGTCAAAAACATGCCTGAATCT
TGTTTTGAGCTTTCTCTAAAGGATCTTGTCGAACAGACGAAATCCTTTGAATCTCAAGAA
GAGTGTCTAATTAATAGTAATAGTGAGAAAAATCAAGCTATGATACAGAAGAGAGTGAAT
ATTAAGAAGAATGAACAAATTAGGAAGGCGAAGATGATGATGAGAAGCAAGAGTATTGAA
AATGGAGGGGTATTTATCAAAATGGTTACCCCTGTTTCTTTGAGATCAAAGAAGACGAAA
AACAAGAATTCATCAGTAAATACAACTAGAGTTTCTCCAAAACCTGAAGAATGTGAAAAT
TCGACTTCGAAGAATTTGGAAAAAGATTGGTGGAAGAAGAGATTTTCTGGTTCAAGTAGC
AGCAATAGTACTGGAAGCAGTGGCAGAAATAGCAGCAGAGGCAGCAGTACTAGTAGCAGA
AACAATAACAACAGGAAAAGGGAAGGGTTATTAAGCAGTTGTTGGTCAAGTTTATGCTTA
TCAGAGAAAAACAAAGTGATGACTGATTTAGATTGGTGA

Peptide Sequence

PEP ID

Solyc06g059860.3.1
PEP Infomation

patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.1)
Sequence

MFDPRKQIPNFHNPVTTFNDTNWEPHNFDFHVSQKHGNIQSKDQKIEDDDESGASSPALW
QNSPSRSPINYRSLSPNSRTQAIARGQWELMEMVKNMPESCFELSLKDLVEQTKSFESQE
ECLINSNSEKNQAMIQKRVNIKKNEQIRKAKMMMRSKSIENGGVFIKMVTPVSLRSKKTK
NKNSSVNTTRVSPKPEECENSTSKNLEKDWWKKRFSGSSSSNSTGSSGRNSSRGSSTSSR
NNNNRKREGLLSSCWSSLCLSEKNKVMTDLDW*

Transcript Sequence

Transcript ID

Solyc06g059860.3.1
Transcript Infomation

patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.1)
Sequence

TGCAGGCACATACTAATAAATACTTTGTTGTCATTAAAAAGAAAGTGACAAATGGACCAT
ACAAAATTGATGAAGAAATTCCTCACACCTAAATTAAATATTACTCTCTTCATAAACTCA
TTTCCATTTCCTACTCTTAACCTTAATCAATCATGTTTGATCCAAGAAAACAAATACCCA
ATTTTCATAATCCTGTCACAACCTTTAATGACACTAATTGGGAACCTCACAATTTTGATT
TCCATGTGTCACAAAAACATGGAAACATTCAATCTAAAGATCAAAAAATTGAAGATGATG
ATGAATCTGGTGCTTCATCACCAGCCTTATGGCAAAATAGTCCATCAAGAAGTCCAATAA
ATTATCGATCACTTTCGCCGAATTCTAGAACTCAAGCTATAGCTAGAGGGCAATGGGAAC
TTATGGAAATGGTCAAAAACATGCCTGAATCTTGTTTTGAGCTTTCTCTAAAGGATCTTG
TCGAACAGACGAAATCCTTTGAATCTCAAGAAGAGTGTCTAATTAATAGTAATAGTGAGA
AAAATCAAGCTATGATACAGAAGAGAGTGAATATTAAGAAGAATGAACAAATTAGGAAGG
CGAAGATGATGATGAGAAGCAAGAGTATTGAAAATGGAGGGGTATTTATCAAAATGGTTA
CCCCTGTTTCTTTGAGATCAAAGAAGACGAAAAACAAGAATTCATCAGTAAATACAACTA
GAGTTTCTCCAAAACCTGAAGAATGTGAAAATTCGACTTCGAAGAATTTGGAAAAAGATT
GGTGGAAGAAGAGATTTTCTGGTTCAAGTAGCAGCAATAGTACTGGAAGCAGTGGCAGAA
ATAGCAGCAGAGGCAGCAGTACTAGTAGCAGAAACAATAACAACAGGAAAAGGGAAGGGT
TATTAAGCAGTTGTTGGTCAAGTTTATGCTTATCAGAGAAAAACAAAGTGATGACTGATT
TAGATTGGTGATGATGCCACTTATCTCTCTCTATATATGTTTTGAGTCTTGTAAAACATA
TACTAATAATGATATATATGTTTGTATAGTTTTCTTTTAGACTATATATAGCTATAATAT
AGTCTTTTATTTCCTTTTTGTTTCTTGATTTGGCAAGCATTTATTTGTTATTTAGAACAA
TATTAAGTTGAAATTTGAGATCAATATATATTGGCAATGTACTATTATTGCATTGGAAGT
AAAGAGATCTCAAAAGGACATTCTTTGAAT