Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g059840.3.1
CDS Infomation

branched chain alpha-keto acid dehydrogenase E1-alpha subunit
Sequence

ATGGCAACTTGGTTTTTAAGAAGGTTAAATAATCACGGTGTCATGCAAAAGCTATCTATG
GCTTTTTCCGGCAAGTCTACCACCGCTATCGGACGGAGATATTTTGTGTCAATGGAAGTT
GGACAAAAGTTGGATCCATACAGTTGTGATGATGATTATCGTGAAAATATCGATCATCAA
AATCAGGATTTGGATTTTCCAGGTGGAAAAATCCCATTGACATCACAAATGAAGTTTATT
TCAGAAGCATCTGAGAAGAGATTACCGTGCTATCGAGTTCTAAATGACGATGGATCTCTA
ATTTCCAACTCCATACATGATCAGTTAGGGGAAGAAGTTGCCGTGAACATGTATAGTGCT
ATGGTTACTTTGAAGACAATGGACACTTACCTTTATGAAGCACAAAGGCAAGGGAGGATT
TCTTTCTATATGACCACTTTTGGTGAAGAAGCTATCAACATTGCTTCTGCTGCTGCTTTA
TCTCCACATGACTTTGTGTTACCTCAATATCGAGAGGCAGGGGTGTTACTATGGCGTGGC
TTCACGGTGCAAGAATGCACAAATCAATGTTTTGGGAATAAGGATGATAAAGGGAAAGGG
AGGCAAATGCCAGTACATTATGGTTCTAATAAACATAATGTTATTACCATATCTTCACCT
TTGGCCACTCAGATATCTCAGGCTGCTGGTGTGGCTTATTCTTTGAAAATGGATAAAACT
GGTGCTTGTGCTGTTGCTTATACAGGGGAAGGTGCAACTAGTGAGGGAGATTTTCATGCT
GGATTGAACTTTGCAGCTGTTTTGGAAGCTCCTGTTATCTTCCTATGCCGGAATAACGGA
TGGGCCATAAGCACTCCTGTACACGAACAATTCCGAAGTGATGGCATTGTGTCAAAGGGT
TTAGGTTATGGAATCAGAAGTATTCGCGTCGATGGGAATGATGTTATTGCAGTTTATAAT
GCTGTTCGTGCAGCTCGTACTATGGCAATTAGTGAGGAAAGACCGATACTAGTTGAGGCA
ATGACGTATCGAGTAGGACACCATTCGACTTCTGATGATTCCACAAAGTATCGTCCAACA
AATGAAATAGAATACTGGAAAACGGCCAGATGCCCCATTAACCTATTCAGAAAACATATT
CAAAGAAATGGTTGGTGGAGTGACGTTCAAGAATCTGAACTCTACACACATGTCAAGAAC
CAGGTATTAGAGGCAATTAAAACAGCAGAAGGAATGGAGAAGCCTGCATTGACAGAATTG
TTTAGTGATGTGTATGAAAAAATGACACCTAATCTCCAAGAACAAGAGAGATGTATTAGA
GATGCAATACACAAATATCCTAAAGACTATCCTACTGATTTTCAAGTATAA

Peptide Sequence

PEP ID

Solyc06g059840.3.1
PEP Infomation

branched chain alpha-keto acid dehydrogenase E1-alpha subunit
Sequence

MATWFLRRLNNHGVMQKLSMAFSGKSTTAIGRRYFVSMEVGQKLDPYSCDDDYRENIDHQ
NQDLDFPGGKIPLTSQMKFISEASEKRLPCYRVLNDDGSLISNSIHDQLGEEVAVNMYSA
MVTLKTMDTYLYEAQRQGRISFYMTTFGEEAINIASAAALSPHDFVLPQYREAGVLLWRG
FTVQECTNQCFGNKDDKGKGRQMPVHYGSNKHNVITISSPLATQISQAAGVAYSLKMDKT
GACAVAYTGEGATSEGDFHAGLNFAAVLEAPVIFLCRNNGWAISTPVHEQFRSDGIVSKG
LGYGIRSIRVDGNDVIAVYNAVRAARTMAISEERPILVEAMTYRVGHHSTSDDSTKYRPT
NEIEYWKTARCPINLFRKHIQRNGWWSDVQESELYTHVKNQVLEAIKTAEGMEKPALTEL
FSDVYEKMTPNLQEQERCIRDAIHKYPKDYPTDFQV*

Transcript Sequence

Transcript ID

Solyc06g059840.3.1
Transcript Infomation

branched chain alpha-keto acid dehydrogenase E1-alpha subunit
Sequence

CATTACATACTTCAACTTTAGCTCAACCACTAGGACTTAAACCATATAGTATATATCCAA
AAGTTTCAATGGCAACTTGGTTTTTAAGAAGGTTAAATAATCACGGTGTCATGCAAAAGC
TATCTATGGCTTTTTCCGGCAAGTCTACCACCGCTATCGGACGGAGATATTTTGTGTCAA
TGGAAGTTGGACAAAAGTTGGATCCATACAGTTGTGATGATGATTATCGTGAAAATATCG
ATCATCAAAATCAGGATTTGGATTTTCCAGGTGGAAAAATCCCATTGACATCACAAATGA
AGTTTATTTCAGAAGCATCTGAGAAGAGATTACCGTGCTATCGAGTTCTAAATGACGATG
GATCTCTAATTTCCAACTCCATACATGATCAGTTAGGGGAAGAAGTTGCCGTGAACATGT
ATAGTGCTATGGTTACTTTGAAGACAATGGACACTTACCTTTATGAAGCACAAAGGCAAG
GGAGGATTTCTTTCTATATGACCACTTTTGGTGAAGAAGCTATCAACATTGCTTCTGCTG
CTGCTTTATCTCCACATGACTTTGTGTTACCTCAATATCGAGAGGCAGGGGTGTTACTAT
GGCGTGGCTTCACGGTGCAAGAATGCACAAATCAATGTTTTGGGAATAAGGATGATAAAG
GGAAAGGGAGGCAAATGCCAGTACATTATGGTTCTAATAAACATAATGTTATTACCATAT
CTTCACCTTTGGCCACTCAGATATCTCAGGCTGCTGGTGTGGCTTATTCTTTGAAAATGG
ATAAAACTGGTGCTTGTGCTGTTGCTTATACAGGGGAAGGTGCAACTAGTGAGGGAGATT
TTCATGCTGGATTGAACTTTGCAGCTGTTTTGGAAGCTCCTGTTATCTTCCTATGCCGGA
ATAACGGATGGGCCATAAGCACTCCTGTACACGAACAATTCCGAAGTGATGGCATTGTGT
CAAAGGGTTTAGGTTATGGAATCAGAAGTATTCGCGTCGATGGGAATGATGTTATTGCAG
TTTATAATGCTGTTCGTGCAGCTCGTACTATGGCAATTAGTGAGGAAAGACCGATACTAG
TTGAGGCAATGACGTATCGAGTAGGACACCATTCGACTTCTGATGATTCCACAAAGTATC
GTCCAACAAATGAAATAGAATACTGGAAAACGGCCAGATGCCCCATTAACCTATTCAGAA
AACATATTCAAAGAAATGGTTGGTGGAGTGACGTTCAAGAATCTGAACTCTACACACATG
TCAAGAACCAGGTATTAGAGGCAATTAAAACAGCAGAAGGAATGGAGAAGCCTGCATTGA
CAGAATTGTTTAGTGATGTGTATGAAAAAATGACACCTAATCTCCAAGAACAAGAGAGAT
GTATTAGAGATGCAATACACAAATATCCTAAAGACTATCCTACTGATTTTCAAGTATAAT
GTCACTTATTTTGAAAAGAAAAAAATATCTATATCATGTCGCATCTTTTGTCTCTGTGTA
TGAATCTTGTCTCCCAGAATCTTCATGTTCTCTTTCCAAATGAAATGCAAAAAACTTTGC
AATTTGAT