Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g054390.3.1
CDS Infomation

DUF21 domain-containing protein (AHRD V3.3 *** A0A0B2P6Y2_GLYSO)
Sequence

ATGATGCAGAATTTGATGAATGCAGTGGCAGTAGTTCGAATGGCAATGAGAGATCCCAAT
AATTCAATTGAAGCAGAAGTAGCATTTGGCACAGTAACATGGTTCATCTATGCCGGATTT
TCATGTTTTTTGGTACTTTTCGCCGGAATTATGTCCGGATTAACATTGGGTCTCATGTCT
TTGGGAATCGTCGAGCTTGAGATCCTTCAGCAAAGTGGAACACCCGCTGAGAAAAAGCAA
GCAGCTGTAATACTTCCGGTTGTTCAGAAGCAACACCAGCTTCTGGTGACCTTACTTCTA
TGTAATGCTGCTGCAATGGAGGCCTTACCCTTATACCTGGACAAAATGTTCAATCAATAT
GTGGCCGTTATACTATCGGTGACTTTTGTCTTGGCATTTGGAGAGGTTATTCCTCAAGCA
ATATGTACCAGGTATGGACTTGCGGTGGGTGCAAATTTTGTTTGGCTTGTTCGTGTTCTG
ATGGTCATATGCTACCCAATTGCGTTTCCCATAGGGAAGATGCTAGACTGCGTATTAGGA
CATCATGAAGTACTATTTAGACGAGCTCAGTTAAAAGCTCTTGTTTCTATCCATAGTCAA
GAGGCTGGAAAGGGAGGTGAACTTACACATGATGAAACAACAATCATAAGTGGAGCATTA
GATTTAACTGAGAAGACTGCTGAGGAGGCCATGACACCCATTGAGTCAACGTTTTCTTTG
GATGTCAATTCAAAGCTGGACTGGGAGGCAATGGGTAAAATTATTGCTCGGGGTCATAGC
CGAGTTCCAGTCTACTCAGGTAGTCCAAAGAATATTATTGGACTTCTATTGGTAAAAAGT
CTTCTTACCGTACGTCCAGAAACTGAGACACCAGTTAGTGCTGTTTCTATCCGCAGAATT
CCACGAGTTCCAGCTGATATGCCACTATATGATATACTAAACGAGTTCCAAAAGGGTAGC
AGTCATATGGCTGCAGTAGTGAAGCTTAAAGGGAAAAACAATAAACCTCCCTTGGTACTT
GATGAAGAGAAATCTGATGATAGCACAGTTGCTGGTGAAAATCCTCATGTAGTTACCCCT
CATTTGACGGCAAAGGGTGAAAAGACAGAGTGTGTCGTTGACATCGAGAAGACTACAGTA
CCGGTAGTAACACCTCCAACATCTGCTGATGCAGTGACAAATGGAGTTCCTGAGTGGTCA
GATGATATCGAGGATGCTGAAGTAATAGGTATTATTACTTTGGAGGATGTTTTTGAAGAA
CTTTTACAGGAGGAAATAGTAGACGAGACTGATGAGTATGTTGATGTACATAAGAGGATA
CGTGTGGCTGCGGCAGCAGCAGCTTCATCAGTGGCACGAGCTCCATCAATCCGGAGGTTA
ACAGCCCAAAAGGGAACCGGAGTGCAAAGCAAGGAAGGACAAAACCTGAAGAAGTCGGGC
GAGGACACTTCCATATCAAGGAGGACGCAAGGGAGTCTCGGAGAGCCTCTTCTTGAGAAG
AAGAGATAA

Peptide Sequence

PEP ID

Solyc06g054390.3.1
PEP Infomation

DUF21 domain-containing protein (AHRD V3.3 *** A0A0B2P6Y2_GLYSO)
Sequence

MMQNLMNAVAVVRMAMRDPNNSIEAEVAFGTVTWFIYAGFSCFLVLFAGIMSGLTLGLMS
LGIVELEILQQSGTPAEKKQAAVILPVVQKQHQLLVTLLLCNAAAMEALPLYLDKMFNQY
VAVILSVTFVLAFGEVIPQAICTRYGLAVGANFVWLVRVLMVICYPIAFPIGKMLDCVLG
HHEVLFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSL
DVNSKLDWEAMGKIIARGHSRVPVYSGSPKNIIGLLLVKSLLTVRPETETPVSAVSIRRI
PRVPADMPLYDILNEFQKGSSHMAAVVKLKGKNNKPPLVLDEEKSDDSTVAGENPHVVTP
HLTAKGEKTECVVDIEKTTVPVVTPPTSADAVTNGVPEWSDDIEDAEVIGIITLEDVFEE
LLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAPSIRRLTAQKGTGVQSKEGQNLKKSG
EDTSISRRTQGSLGEPLLEKKR*

Transcript Sequence

Transcript ID

Solyc06g054390.3.1
Transcript Infomation

DUF21 domain-containing protein (AHRD V3.3 *** A0A0B2P6Y2_GLYSO)
Sequence

TATCAATATAACAAAAAGATCCATTATAAAATATTAATTTAATTTAAATTTTTATAGTTA
ACAAATAAAAATGAATGGGATAATACTAAAAACGAAGGGAGTATAGGATTATTCTTTTGG
GTGATCAAAAGTGTTTTCCGTACTGTATACCAAAATAGAAACTGAAAGGGACCGTCGTCC
AAGTTCCACCGTCTTTATTTCTCTGTTTCAATATATAGGTGAAATTTTTCAAATTTTGAT
TGTAATTTTAATGTATGTTTAATTATTTTCAATTTTTTATATAACATTTCACTACGAGAT
ATAAATTGGAACTTGGATAGGTAGAAAGAAAAGAAAAAAAAGAAAGAAGGTTCTAGTTTG
AACAAGAAGAATCAGTAGCAAAAAAACACAATGATGCAGAATTTGATGAATGCAGTGGCA
GTAGTTCGAATGGCAATGAGAGATCCCAATAATTCAATTGAAGCAGAAGTAGCATTTGGC
ACAGTAACATGGTTCATCTATGCCGGATTTTCATGTTTTTTGGTACTTTTCGCCGGAATT
ATGTCCGGATTAACATTGGGTCTCATGTCTTTGGGAATCGTCGAGCTTGAGATCCTTCAG
CAAAGTGGAACACCCGCTGAGAAAAAGCAAGCAGCTGTAATACTTCCGGTTGTTCAGAAG
CAACACCAGCTTCTGGTGACCTTACTTCTATGTAATGCTGCTGCAATGGAGGCCTTACCC
TTATACCTGGACAAAATGTTCAATCAATATGTGGCCGTTATACTATCGGTGACTTTTGTC
TTGGCATTTGGAGAGGTTATTCCTCAAGCAATATGTACCAGGTATGGACTTGCGGTGGGT
GCAAATTTTGTTTGGCTTGTTCGTGTTCTGATGGTCATATGCTACCCAATTGCGTTTCCC
ATAGGGAAGATGCTAGACTGCGTATTAGGACATCATGAAGTACTATTTAGACGAGCTCAG
TTAAAAGCTCTTGTTTCTATCCATAGTCAAGAGGCTGGAAAGGGAGGTGAACTTACACAT
GATGAAACAACAATCATAAGTGGAGCATTAGATTTAACTGAGAAGACTGCTGAGGAGGCC
ATGACACCCATTGAGTCAACGTTTTCTTTGGATGTCAATTCAAAGCTGGACTGGGAGGCA
ATGGGTAAAATTATTGCTCGGGGTCATAGCCGAGTTCCAGTCTACTCAGGTAGTCCAAAG
AATATTATTGGACTTCTATTGGTAAAAAGTCTTCTTACCGTACGTCCAGAAACTGAGACA
CCAGTTAGTGCTGTTTCTATCCGCAGAATTCCACGAGTTCCAGCTGATATGCCACTATAT
GATATACTAAACGAGTTCCAAAAGGGTAGCAGTCATATGGCTGCAGTAGTGAAGCTTAAA
GGGAAAAACAATAAACCTCCCTTGGTACTTGATGAAGAGAAATCTGATGATAGCACAGTT
GCTGGTGAAAATCCTCATGTAGTTACCCCTCATTTGACGGCAAAGGGTGAAAAGACAGAG
TGTGTCGTTGACATCGAGAAGACTACAGTACCGGTAGTAACACCTCCAACATCTGCTGAT
GCAGTGACAAATGGAGTTCCTGAGTGGTCAGATGATATCGAGGATGCTGAAGTAATAGGT
ATTATTACTTTGGAGGATGTTTTTGAAGAACTTTTACAGGAGGAAATAGTAGACGAGACT
GATGAGTATGTTGATGTACATAAGAGGATACGTGTGGCTGCGGCAGCAGCAGCTTCATCA
GTGGCACGAGCTCCATCAATCCGGAGGTTAACAGCCCAAAAGGGAACCGGAGTGCAAAGC
AAGGAAGGACAAAACCTGAAGAAGTCGGGCGAGGACACTTCCATATCAAGGAGGACGCAA
GGGAGTCTCGGAGAGCCTCTTCTTGAGAAGAAGAGATAAAGAGTTGTTAGTTAGGTAATC
TCAGAGTCTCAGTGATGTTGAGAGTGAAAATAACGAAGTCTATGTATAGTTTTGTTAGTG
CATATACAACATATTCTTCTCTGTAAAACTTTGGCCTCTTGTTGTTAGAGAATCATAAAG
TTATAAGTTTCCTTGTATATAATATTCATAGTTGATTTCTAGGGATTTAGATATCTATTT
TATTTGTTAACCTCTCTTATATTTCAATCGTTGTAATTCTCCTAGAATACCTTGGTCAGT
AACATAGTATCGTCAAATTCGTACCTACTTGGACTCTTGGTA