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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g054260.1.1
CDS Infomation

photosystem 1 reaction center protein subunit 2
Sequence

ATGGCTATGGCAACTCAAGCTTCCCTCTTCACCCCTCCTCTCTCCGTCCCCAAATCCACC
ACCGCTCCATGGAAACAATCCCTCGTATCGTTCTCTACACCTAAGCAACTCAAATCCACC
GTCTCAGTAACCCGACCTATCCGTGCCATGGCTGAAGAAGCCCCAGCTGCCACCGAAGAA
AAACCCGCTCCAGCGGGATTTACCCCACCTCAATTGGACCCAAACACACCCTCCCCAATC
TTCGGTGGCAGCACGGGTGGGCTTCTTCGAAAAGCCCAAGTGGAAGAATTCTACGTCATC
ACATGGGAATCACCAAAGGAACAGATCTTTGAGATGCCAACAGGTGGTGCTGCTATAATG
AGACAAGGACCAAATTTGTTGAAATTGGCAAGGAAAGAACAGTGCTTAGCTCTTGGTACA
AGGTTGAGATCTAAATACAAGATCAATTACCAGTTTTACAGGGTTTTCCCCAATGGCGAG
GTGCAATATTTGCATCCCAAAGATGGTGTGTACCCTGAAAAAGTGAACCCTGGCCGTGAA
GGAGTGGGTCAGAACTTCAGATCAATTGGGAAGAACAAGAGTGCTATTGAAGTCAAGTTT
ACTGGGAAACAAGTGTATGATATTTAA

Peptide Sequence

PEP ID

Solyc06g054260.1.1
PEP Infomation

photosystem 1 reaction center protein subunit 2
Sequence

MAMATQASLFTPPLSVPKSTTAPWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEE
KPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM
RQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRE
GVGQNFRSIGKNKSAIEVKFTGKQVYDI*

Transcript Sequence

Transcript ID

Solyc06g054260.1.1
Transcript Infomation

photosystem 1 reaction center protein subunit 2
Sequence

ATGGCTATGGCAACTCAAGCTTCCCTCTTCACCCCTCCTCTCTCCGTCCCCAAATCCACC
ACCGCTCCATGGAAACAATCCCTCGTATCGTTCTCTACACCTAAGCAACTCAAATCCACC
GTCTCAGTAACCCGACCTATCCGTGCCATGGCTGAAGAAGCCCCAGCTGCCACCGAAGAA
AAACCCGCTCCAGCGGGATTTACCCCACCTCAATTGGACCCAAACACACCCTCCCCAATC
TTCGGTGGCAGCACGGGTGGGCTTCTTCGAAAAGCCCAAGTGGAAGAATTCTACGTCATC
ACATGGGAATCACCAAAGGAACAGATCTTTGAGATGCCAACAGGTGGTGCTGCTATAATG
AGACAAGGACCAAATTTGTTGAAATTGGCAAGGAAAGAACAGTGCTTAGCTCTTGGTACA
AGGTTGAGATCTAAATACAAGATCAATTACCAGTTTTACAGGGTTTTCCCCAATGGCGAG
GTGCAATATTTGCATCCCAAAGATGGTGTGTACCCTGAAAAAGTGAACCCTGGCCGTGAA
GGAGTGGGTCAGAACTTCAGATCAATTGGGAAGAACAAGAGTGCTATTGAAGTCAAGTTT
ACTGGGAAACAAGTGTATGATATTTAA