Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g053770.3.1
CDS Infomation	DNA-repair protein XRCC4, putative (AHRD V3.3 *** B9RTD9_RICCO)
Sequence	ATGGGGTCACCAAGTCCGAAACACACATGCCTCAAACTGGTAATATCTAATAAGGAACAA ATATTCGTGAAAGGCACATGGTTCTCTTCTTACTTTGACCTCTTCATCACTGACGGCCTC CATTCTTGGACTTGCCATGCGTCTGAGGAAGAGGTTGAAGAGAGAGCATCTCAGTGGGAT CAACCCGTTTCGGAGTATATTGATTTGGGTGAGAAGTATTTAGGATTTCAACAACCCGGT TCTGTTTATGGGTTTGATGATGCTGGTACTGGGCACAAAAGGCTCTCATGGACATTTGAG AAAGAAGGAACTAAGCTGGAATGGCGGTGGAAATGCCAATCGTCGTCTAATAGCAAAAAA ACTACAGCTGATATCTTGGACTTCCTCATGGATGCAAATATTAGACTGAGTGATGAAGTT GTCAGTAAAACTGAGTCATTTGAGAGGATGAAGGTGGAGGCAGAAAAATGTTTAACACAA AGCGAGAAACTCAGCAAAGAGAAAGAAGAATTTGAATCTGCAATATATGCAAAGTTTCTT GGAGTTCTGAACGCAAAGAAGAAAAAACTCAGAGAACTTCGCGATAAGCTCTCGAAACAG GCAACCTCTGTTGAAGAGCCAGTAGAAGAGGACGCACAATCTACGGACAGAACTGAGACC TTTGATGAGGAAATAAGTGGGGAAGAAGTGGAGAAGGATGATGTTGGCACTTCAAAAGAT GTTCCAGCCAGAAGGGGTCGTGGTCGTGGTCGAAAGAGAAAGTAA

Peptide Sequence

PEP ID	Solyc06g053770.3.1
PEP Infomation	DNA-repair protein XRCC4, putative (AHRD V3.3 *** B9RTD9_RICCO)
Sequence	MGSPSPKHTCLKLVISNKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQWD QPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSKK TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAKFL GVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDEEISGEEVEKDDVGTSKD VPARRGRGRGRKRK*

Transcript Sequence

Transcript ID	Solyc06g053770.3.1
Transcript Infomation	DNA-repair protein XRCC4, putative (AHRD V3.3 *** B9RTD9_RICCO)
Sequence	CGCCAGCGGTAGGACACAGATAATAAGGCGCGGAGGGGAGTTTCAATTTTGTTAAAGCTT CCATAGCACGAAGCCACAGTGTGAGTTGAAGAAGGAGAAGCCATCCCTGTCAATGGGGTC ACCAAGTCCGAAACACACATGCCTCAAACTGGTAATATCTAATAAGGAACAAATATTCGT GAAAGGCACATGGTTCTCTTCTTACTTTGACCTCTTCATCACTGACGGCCTCCATTCTTG GACTTGCCATGCGTCTGAGGAAGAGGTTGAAGAGAGAGCATCTCAGTGGGATCAACCCGT TTCGGAGTATATTGATTTGGGTGAGAAGTATTTAGGATTTCAACAACCCGGTTCTGTTTA TGGGTTTGATGATGCTGGTACTGGGCACAAAAGGCTCTCATGGACATTTGAGAAAGAAGG AACTAAGCTGGAATGGCGGTGGAAATGCCAATCGTCGTCTAATAGCAAAAAAACTACAGC TGATATCTTGGACTTCCTCATGGATGCAAATATTAGACTGAGTGATGAAGTTGTCAGTAA AACTGAGTCATTTGAGAGGATGAAGGTGGAGGCAGAAAAATGTTTAACACAAAGCGAGAA ACTCAGCAAAGAGAAAGAAGAATTTGAATCTGCAATATATGCAAAGTTTCTTGGAGTTCT GAACGCAAAGAAGAAAAAACTCAGAGAACTTCGCGATAAGCTCTCGAAACAGGCAACCTC TGTTGAAGAGCCAGTAGAAGAGGACGCACAATCTACGGACAGAACTGAGACCTTTGATGA GGAAATAAGTGGGGAAGAAGTGGAGAAGGATGATGTTGGCACTTCAAAAGATGTTCCAGC CAGAAGGGGTCGTGGTCGTGGTCGAAAGAGAAAGTAAATATCTAAGGATCACCATTTACA GCATCTTTATTCATCCTCGTTTTTTTTTGCCTCTTTATCTAACTGCTTATAATTTTACTT TCCTTCTAGTGGAGAATGACTGAATGAGGATATGTATATACAGTGTTTGAATTTGTGAAT ACTTCAATCATTTGGCTTTTCTGTTGCATTATCTCAGACGCCTCCCTATTTTCCAAGGTA TTTGTACTAAATTCTGCGTATAGTTGAAGTCCAGAGCAATTTTTCTGGAAATGAGTTGCA TGTTTGGAAATTGTAATGTCATTCTCGTTTTTGAAGGTAAGAAAATCAGGACAAAATTCG AATAACAGGTTTATCTGAGATTAGATATGGTGTTTATTTTGGTGCCTCAGATTCTTAAAA TATGTTGCAGTTAGATATGAATAGCTACTAAGACTCCCTCCATTTATATTATATGGTATA TTTAGCTTGAGAATATTGACTCCAATTTTTTTTATTATGAACCAACTATATTTTTATTTT ATTTTCGAATATAATTGAAGCGTAACTTGCACACTAACCAAAAAAAAAAACCTTGCACAC TAACATAATATGCTAATGTAAAATTCCTCCTGAAAAAGCT