Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g053300.3.1
CDS Infomation

RNA-binding protein, putative (AHRD V3.3 *** B9T1D4_RICCO)
Sequence

ATGGCTGTGGTTGAGAATGCTGCTATTAACGTTGTTGTTTCATCGAATCCCAGAAGAATT
GTACAGAAGGATGTTGTTGTTGATCATCAGTCAGTGAAAACGAAACAGAACAATGATGTG
CAGAGGTCGAAGGTTTCCAGCGATCAGAATTTTGAAATTATGTCTGTTAATCAGCAGGAG
CAGGAAGAACCCCAGAAGGAGAATGGAATTCAGCAGAAAGAGGAAAGCGTGAATGGTAAT
GGAGTATTGGATAGTCATAGTATTCAGCATCAGAAAATGAACGGTGTTGATGGTGGTGAT
GAAGGGTTTAAGAAGGAGATGAGGGATTTGGAGGAAATGCTTTCCAAATTGAATCCCATG
GCTGAAGAGTTTGTGCCTCTTTCAATGGCTAACAACAACATGCTAGTGCCATATACACCC
GGCGCAGTGTATTTTGGCTTTGATGCTAACAATTTTCTAATGCAGACTGAGGCCAATGGA
AATTCCAACAGAAGGAAGAAAAATGGCTACGGTCATGGAAGGAGAAGGATGAATACCCGA
ACAGGCATGGCCCAAAGGGAAGATGTTATAAGGAGGACGGTTTATGTATCCGACATTGAT
CATCAGGTGACTGAAGAGCAGCTCGCATCACTTTTTCTTGATTGCGGACAGGTTGTTGAC
TGTCGTATATGTGGTGACACCAATTCTGTACTTCGATTCGCCTTTATTGAGTTTACAGAT
GAAGAAGGTGCAAAGAGTGCTCTGAGTCTTGCAGGAACTATCCTTGGGGGTTATCCTGTG
AGAGTGCTTCCTTCTAAAACTGCGATTGCACCGGTTAATCCAACCTTTCTTCCTAGGTCT
GAAGATGAAAGAGAGATGTGTGCTAGAACTGTGTACTGTACAAATATTGATAAGAAGATT
ACTCAAGCAGATGTCAAGCTGTTTTTTGAGTCCTTATGTGGAGAGGTTCATCGCTTGAGG
TTGCTTGGTGACTATCATCATTCGACTCGTATCGCTTTTGTTGAGTTTGTCATGGCAGAG
AGCGCAATTATAGCACTGAACTGCAGTGGTGCATTCCTGGGATCACTTCCCATAAGGGTA
AGCCCATCAAAGACTCCTGTGCGTCCGCGTTTTACTCGTTAA

Peptide Sequence

PEP ID

Solyc06g053300.3.1
PEP Infomation

RNA-binding protein, putative (AHRD V3.3 *** B9T1D4_RICCO)
Sequence

MAVVENAAINVVVSSNPRRIVQKDVVVDHQSVKTKQNNDVQRSKVSSDQNFEIMSVNQQE
QEEPQKENGIQQKEESVNGNGVLDSHSIQHQKMNGVDGGDEGFKKEMRDLEEMLSKLNPM
AEEFVPLSMANNNMLVPYTPGAVYFGFDANNFLMQTEANGNSNRRKKNGYGHGRRRMNTR
TGMAQREDVIRRTVYVSDIDHQVTEEQLASLFLDCGQVVDCRICGDTNSVLRFAFIEFTD
EEGAKSALSLAGTILGGYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTVYCTNIDKKI
TQADVKLFFESLCGEVHRLRLLGDYHHSTRIAFVEFVMAESAIIALNCSGAFLGSLPIRV
SPSKTPVRPRFTR*

Transcript Sequence

Transcript ID

Solyc06g053300.3.1
Transcript Infomation

RNA-binding protein, putative (AHRD V3.3 *** B9T1D4_RICCO)
Sequence

TATATTATATCTAATTTATTTTATATTATTAATATCGGTATAATTTTAACTGGCTCGAAC
GAGTAGTGTGAAGAAAGTCCAAAAAGGAAGTGTGTCAAAACGGAAGATCCGAACAACCCA
CCTCTTTCTTCTCTCTCCTGCTATAAACTAGTGGAGTTTAGTACTATTCCATATCTTGTC
TCTCTCTGCAGAATCAGTAAAAACAATACACTACAACACTCCAAACAGAGAAACAAAGAA
TCCCTTTCTTGTTTTGTTCATAGCTTTTTTGATTTTTCATTTTGTAGCTGATGATGCTCT
GTTTTTTGTAGTAGCAAAAATGGTTGTCATTTAGAGAGTATCAGAATACCAAAAAGGGTA
GGAGGAGAAGAGAAAAAGGAGCGTTCTTTGTTATAATCATGGCTGTGGTTGAGAATGCTG
CTATTAACGTTGTTGTTTCATCGAATCCCAGAAGAATTGTACAGAAGGATGTTGTTGTTG
ATCATCAGTCAGTGAAAACGAAACAGAACAATGATGTGCAGAGGTCGAAGGTTTCCAGCG
ATCAGAATTTTGAAATTATGTCTGTTAATCAGCAGGAGCAGGAAGAACCCCAGAAGGAGA
ATGGAATTCAGCAGAAAGAGGAAAGCGTGAATGGTAATGGAGTATTGGATAGTCATAGTA
TTCAGCATCAGAAAATGAACGGTGTTGATGGTGGTGATGAAGGGTTTAAGAAGGAGATGA
GGGATTTGGAGGAAATGCTTTCCAAATTGAATCCCATGGCTGAAGAGTTTGTGCCTCTTT
CAATGGCTAACAACAACATGCTAGTGCCATATACACCCGGCGCAGTGTATTTTGGCTTTG
ATGCTAACAATTTTCTAATGCAGACTGAGGCCAATGGAAATTCCAACAGAAGGAAGAAAA
ATGGCTACGGTCATGGAAGGAGAAGGATGAATACCCGAACAGGCATGGCCCAAAGGGAAG
ATGTTATAAGGAGGACGGTTTATGTATCCGACATTGATCATCAGGTGACTGAAGAGCAGC
TCGCATCACTTTTTCTTGATTGCGGACAGGTTGTTGACTGTCGTATATGTGGTGACACCA
ATTCTGTACTTCGATTCGCCTTTATTGAGTTTACAGATGAAGAAGGTGCAAAGAGTGCTC
TGAGTCTTGCAGGAACTATCCTTGGGGGTTATCCTGTGAGAGTGCTTCCTTCTAAAACTG
CGATTGCACCGGTTAATCCAACCTTTCTTCCTAGGTCTGAAGATGAAAGAGAGATGTGTG
CTAGAACTGTGTACTGTACAAATATTGATAAGAAGATTACTCAAGCAGATGTCAAGCTGT
TTTTTGAGTCCTTATGTGGAGAGGTTCATCGCTTGAGGTTGCTTGGTGACTATCATCATT
CGACTCGTATCGCTTTTGTTGAGTTTGTCATGGCAGAGAGCGCAATTATAGCACTGAACT
GCAGTGGTGCATTCCTGGGATCACTTCCCATAAGGGTAAGCCCATCAAAGACTCCTGTGC
GTCCGCGTTTTACTCGTTAAGCAGTGCTCTGATCAATCACTGTGGCATTGCTTTTCAGTT
GGTCTTTTGCTTATAAGCATATCTAAATATATACTACATATAGTATTAGAGTACTTTTCT
GGCATTTTTCATTTAGTTTTCAGTACTAAATCTCTGCTGAGAATCTCTAATTCGCGGGGT
ACTAGTTATCAAGCTTATAGAGTTGGGCTGGTTTATAGTAGATTTATTAATTTAAGTTGG
TGTATTATGTTTCTATAGACACTGCCTGAGTACCAAAACTAGATGGATGTTCTTAATTTA
CAGTTATATTTATCAGTAACTTTGTTGAAATTCGATGTGTTTGGCTCTTTCTAAGTTTTC
TGCTATGTTATTTGGTTCTTCAAAACATGTTTTCCTGGGGAATTTGGTTCAATTGTTACA
TCTCTTCTTGTTTTGATTTTCACTGCAAAGACTTAGATGTAATTCACAACTTGTAATATA
TGTTTATACTTGAGGAAAGTTGACAAATAAAGGGGTCGTTTGGTTTGTGGATAAAGTTAT
CTCGTGATTATAATCCTTGGACCAATAACACCAAG