Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g051730.3.1
CDS Infomation

ABC1 family protein (AHRD V3.3 *** B9HHP1_POPTR)
Sequence

ATGGCTGGCAGGTCTATGTGGCGCGCCACAACCAAGCTGTTAGTGGCCACCACCACCCTT
GGTGGTGGAGCAGCGGCGGCCACAATTGCCAGCTCCGACGACCCAGCCATGGCCCTTAAG
CTTTGCACAAATGTCCCTCTCCGTCTCTATCGCGATTCCGTCACTGCTGCCACCATTGCC
TTCGATTATGAATATTCACTCTGGGGACTGCCAGAAGGTAGTGCAGAGAGAGCAAAAGCC
AAACATGAAGTTCACATGAGGGGTGCACGCAGGCTAGAAGAACTTTGTTTCAGAAATGGT
GGAATTTATATTAAGCTTGGTCAACATTTAGGACAGCTGGAGTACTTAGTACCTGAAGAG
TATGTACGTATTATGAGGGAATCAATGTTAAATAGATGTCCTCATTCTTCTTATGATCAA
GTGCATGAAGTTGTGAAGAAAGAGCTTGGAGGTGCACCTGATGAAATCTTTGATGAATTT
GATCCGATACCAATAGCAAGTGCTTCTCTTGCTCAAGTCCACGTTGCTCGAACGCGTGAT
GGGCAAAAAGTTGCTGTCAAGGTTCAGCACACACATATGACAGATACTGCTGCAGCAGAT
TATGCAACTGTGGAGTTGATAGTGAACACATTGCATCGATTTTTTCCTTCCTTTGATTAC
AGGTGGTTGATTGCTGAAGTTCGTGAAAGTATACCTAAGGAACTAGATTTCTTGGTTGAG
GCCAAAAACAGCATAAAATGTATGGATAACTTTCGGAAGCTGTCTCCTCATATTGCAGAC
TACGTTTATGCACCAAAGGTGTATTGGAATTTAAGCACTTCAAAGCTGTTAACCATGGAA
TATATGGAGGCTGCACAAGTAAATGACTTGAAGAGCATTCAAAGGCTTGGAATTCAGCCA
AGTGATGTTGTAAAGTTGGTTAGTGAGACTTTTGCGCAAATGATGTTCAAACATGGTTTT
GTGCATTGTGATCCACATGCTGCAAACCTGCTAGTCCGCCCTTTGCCTTCTGGTCGTAGG
AGCATATTTGGAAGGAGAAAACCTCAGTTGATACTTTTGGACCATGGTTTATACAAAGAA
CTTGATTACAATACCAGAATAAACTATGCTGCACTGTGGAAGGCTTTGGTATATTCTGAT
GCAGATGGGATAAAGGAAAACTGTGTAAAACTGGGTGCTGGAGACGATCTTTACGCATTG
TTTGCTGGGATTCTCACAATGAGGCCTTGGAATAAAGTGATAGATTCTTCAGTTGATCAT
CTTGTTGTCAAAGGCACAGACGGTGACCGTTCAGAATTGCAGATTCAAGGGCCTTCTCTT
GAGTCATTCTTAATCATTGGAAGGGTTTCATCTGAAGCGGTTCTTGAGTCTATGTTGTTG
CAAAAGAGATCATTATTATCTTGGATCAATTTTTGGATACAGAAGATCTTGTTGGAAGGC
CGGGTTTGCGTAATGCACATAGCAGTGTGGCTTTTACAACTTCAGAAAGCATTGACATTG
TGA

Peptide Sequence

PEP ID

Solyc06g051730.3.1
PEP Infomation

ABC1 family protein (AHRD V3.3 *** B9HHP1_POPTR)
Sequence

MAGRSMWRATTKLLVATTTLGGGAAAATIASSDDPAMALKLCTNVPLRLYRDSVTAATIA
FDYEYSLWGLPEGSAERAKAKHEVHMRGARRLEELCFRNGGIYIKLGQHLGQLEYLVPEE
YVRIMRESMLNRCPHSSYDQVHEVVKKELGGAPDEIFDEFDPIPIASASLAQVHVARTRD
GQKVAVKVQHTHMTDTAAADYATVELIVNTLHRFFPSFDYRWLIAEVRESIPKELDFLVE
AKNSIKCMDNFRKLSPHIADYVYAPKVYWNLSTSKLLTMEYMEAAQVNDLKSIQRLGIQP
SDVVKLVSETFAQMMFKHGFVHCDPHAANLLVRPLPSGRRSIFGRRKPQLILLDHGLYKE
LDYNTRINYAALWKALVYSDADGIKENCVKLGAGDDLYALFAGILTMRPWNKVIDSSVDH
LVVKGTDGDRSELQIQGPSLESFLIIGRVSSEAVLESMLLQKRSLLSWINFWIQKILLEG
RVCVMHIAVWLLQLQKALTL*

Transcript Sequence

Transcript ID

Solyc06g051730.3.1
Transcript Infomation

ABC1 family protein (AHRD V3.3 *** B9HHP1_POPTR)
Sequence

TAAAATCAATTTTTTTTTTAATCTAAAGGGTGAACGGGAAGTTAGGCTGAGGACAAAAAT
GCGTAAAAGTAGGTGGGCTACGTTGGTAATAGAATATAGGAGAAGGGGTAGTAGCATTTA
CCTTCTCCATTTCTCTACCTTGTTCGTCAAAATCCAAATCCTCCAGGAGGGGTCGGAAAA
ATAATGGCTGGCAGGTCTATGTGGCGCGCCACAACCAAGCTGTTAGTGGCCACCACCACC
CTTGGTGGTGGAGCAGCGGCGGCCACAATTGCCAGCTCCGACGACCCAGCCATGGCCCTT
AAGCTTTGCACAAATGTCCCTCTCCGTCTCTATCGCGATTCCGTCACTGCTGCCACCATT
GCCTTCGATTATGAATATTCACTCTGGGGACTGCCAGAAGGTAGTGCAGAGAGAGCAAAA
GCCAAACATGAAGTTCACATGAGGGGTGCACGCAGGCTAGAAGAACTTTGTTTCAGAAAT
GGTGGAATTTATATTAAGCTTGGTCAACATTTAGGACAGCTGGAGTACTTAGTACCTGAA
GAGTATGTACGTATTATGAGGGAATCAATGTTAAATAGATGTCCTCATTCTTCTTATGAT
CAAGTGCATGAAGTTGTGAAGAAAGAGCTTGGAGGTGCACCTGATGAAATCTTTGATGAA
TTTGATCCGATACCAATAGCAAGTGCTTCTCTTGCTCAAGTCCACGTTGCTCGAACGCGT
GATGGGCAAAAAGTTGCTGTCAAGGTTCAGCACACACATATGACAGATACTGCTGCAGCA
GATTATGCAACTGTGGAGTTGATAGTGAACACATTGCATCGATTTTTTCCTTCCTTTGAT
TACAGGTGGTTGATTGCTGAAGTTCGTGAAAGTATACCTAAGGAACTAGATTTCTTGGTT
GAGGCCAAAAACAGCATAAAATGTATGGATAACTTTCGGAAGCTGTCTCCTCATATTGCA
GACTACGTTTATGCACCAAAGGTGTATTGGAATTTAAGCACTTCAAAGCTGTTAACCATG
GAATATATGGAGGCTGCACAAGTAAATGACTTGAAGAGCATTCAAAGGCTTGGAATTCAG
CCAAGTGATGTTGTAAAGTTGGTTAGTGAGACTTTTGCGCAAATGATGTTCAAACATGGT
TTTGTGCATTGTGATCCACATGCTGCAAACCTGCTAGTCCGCCCTTTGCCTTCTGGTCGT
AGGAGCATATTTGGAAGGAGAAAACCTCAGTTGATACTTTTGGACCATGGTTTATACAAA
GAACTTGATTACAATACCAGAATAAACTATGCTGCACTGTGGAAGGCTTTGGTATATTCT
GATGCAGATGGGATAAAGGAAAACTGTGTAAAACTGGGTGCTGGAGACGATCTTTACGCA
TTGTTTGCTGGGATTCTCACAATGAGGCCTTGGAATAAAGTGATAGATTCTTCAGTTGAT
CATCTTGTTGTCAAAGGCACAGACGGTGACCGTTCAGAATTGCAGATTCAAGGGCCTTCT
CTTGAGTCATTCTTAATCATTGGAAGGGTTTCATCTGAAGCGGTTCTTGAGTCTATGTTG
TTGCAAAAGAGATCATTATTATCTTGGATCAATTTTTGGATACAGAAGATCTTGTTGGAA
GGCCGGGTTTGCGTAATGCACATAGCAGTGTGGCTTTTACAACTTCAGAAAGCATTGACA
TTGTGAAAGCAAGTATACTTCCAATTTTATTGGATGTCCACTAACATAGTGAAAGCAACT
AACAATCAGGAGATGTTTGATATGGAATTTTGTTCAAAACTTTCTATAGAAGGTGGATTC
ATTAATTTTATTTTATTTTTGCAATTCTTTTGTAATATGCTGCATTTACAAATTTTTAAG
CAGAATGAACCTCTTAGACTAGGCTAGGGAAGCAAAAATGTTTATTTGGTTGTGAATCAT
CCTAGGATATTAATGGTATGTTAGCCATAAATTGTGCAATTTCTTTTATGGCAGACTTTT
TATCTATCAACTTTTGGAGAATCGCGTTTCGA