Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g051620.3.1
CDS Infomation

PI-phospholipase C PLC2
Sequence

ATGTCGAAACAAACGTACAAAGTCGGATTTTTTTTCCGGCGGCAGTTCACCATGGCTGCC
GCGGAAGCTCCGGCGGACATTAAGAGCCTATTTAAACGTTATTCCGACGACAGCGGAGTT
ATGAGCGTCCAGAATCTTCATAGTTTCTTAATTGAGATCCAGAAGGAGAAAAATGTTAGC
TTAGAGAACGCAGAAGCCATTATCAATAATCACGGCGGCGACTCCAAGCAGAAAGGCCTC
CAGCTCGATGGCTTCTTCAAGTTTCTCTTTTCTGATGTTAATCCTCCTCTCGATCCTAAA
CTTGGGATTCACCATGATATGACTGCACCTCTGTCTCATTACTACATATACACAGGCCAT
AATTCATATTTAACTGGGAATCAACTGAGTAGTGATTGCAGTGATGTTCCCATAATACAA
GCTCTTCAGAGAAGTGTTAGAGTAATTGAATTAGATATTTGGCCAAATTCAGACAAAGAT
GATATAGAAGTTCTACATGGAAGGACACTGACTGCTCCAGTGACGCTAATCAAATGTTTG
AGGTCTATCAAGGAGCATGCCTTTTGTGCATCGGAGTATCCTCTTGTAATAACACTTGAA
GATCATCTCACGCCAGATCTTCAGGAAAAAGTAGCTGAGATGATCACTCAAACATTTGGA
GAGATGCTGTTTTCTCCTTCAGAAAGTTTGAAGGAGCTTCCTTCTCCGGAGTCACTGAGA
AAGCGTGTGATGATATCAACTAAGCCACCAAAAGAATACTTAAAATCCAAGGAAGTTAAG
GAAAAAGATGACACGAAGAAAGAAGCTGAGGCAGCTTCAGAATACAAGCGCCTAATTGCC
ATTCATGCTGGAAAGGGGAAAGGAGGACTATCTGATTGGTTGAGGGTTGACCTCAATAAA
GTAAGACGGCTTAGTCTCAGTGAACCAGAACTTGAAAAAGCTGTAGATACTCATGCAAAA
GAAATTATCAGGTTCACTCAGCATAACTTGCTGAGAATATACCCAAAGGGCATTCGAGTT
GACTCGTCCAATTATGATCCTTTTGTTGGTTGGATGCACGGAGCTCAAATGGTAGCATTT
AATATGCAGGGTTATGGAAGATCACTTTGGTTGATGCATGGTATGTTCAGGGCTAATGGT
GGCTGTGGATATGTTAAGAAACCTGATCTACTATTGAAAGCTGGTCCCGACAATGAGGTC
TTCGATCCTACAGCAAATTTGCCTGTCAAAACTACACTAAAGGTGACTGTATATATGGGT
GATGGGTGGGACAAAGACTTCGATCAGACAGACTTTGACACGTACTCACCTCCAGATTTC
TATGCAAAGCTAGGAATTGCTGGAGTTCCTGCTGATGAAGTAAAGAAGAGAACAGAGACG
ATAGACGACAATTGGATACCAAGCTGGAATGAGCAGTTTGAGTTTCCACTAACCGTTCCT
GAGTTAGCTCTACTTCGTATCAAAGTTCTTGATTATAATTTGTCCGACAAGGATGAGTTT
GCTGGCCAAACATGTCTACCTGTGGCAGAGCTGCGACAAGGTATCCGAGCAGTCCCACTC
TATGATCGGAAAGGAGAGAAGTACAGTTCTGTGAAGCTTCTCATGCATTTCGAGTTTAAA
TAA

Peptide Sequence

PEP ID

Solyc06g051620.3.1
PEP Infomation

PI-phospholipase C PLC2
Sequence

MSKQTYKVGFFFRRQFTMAAAEAPADIKSLFKRYSDDSGVMSVQNLHSFLIEIQKEKNVS
LENAEAIINNHGGDSKQKGLQLDGFFKFLFSDVNPPLDPKLGIHHDMTAPLSHYYIYTGH
NSYLTGNQLSSDCSDVPIIQALQRSVRVIELDIWPNSDKDDIEVLHGRTLTAPVTLIKCL
RSIKEHAFCASEYPLVITLEDHLTPDLQEKVAEMITQTFGEMLFSPSESLKELPSPESLR
KRVMISTKPPKEYLKSKEVKEKDDTKKEAEAASEYKRLIAIHAGKGKGGLSDWLRVDLNK
VRRLSLSEPELEKAVDTHAKEIIRFTQHNLLRIYPKGIRVDSSNYDPFVGWMHGAQMVAF
NMQGYGRSLWLMHGMFRANGGCGYVKKPDLLLKAGPDNEVFDPTANLPVKTTLKVTVYMG
DGWDKDFDQTDFDTYSPPDFYAKLGIAGVPADEVKKRTETIDDNWIPSWNEQFEFPLTVP
ELALLRIKVLDYNLSDKDEFAGQTCLPVAELRQGIRAVPLYDRKGEKYSSVKLLMHFEFK
*

Transcript Sequence

Transcript ID

Solyc06g051620.3.1
Transcript Infomation

PI-phospholipase C PLC2
Sequence

AAGGCATAGTTGAACAACTTCAACCGTATGTTTCAAGGCCTTTATTTTATTTGTTTGTAT
AGCAAGTTGATGTATTTACTTATAACCTTTGTTATGAAATTCAAACAACGTTAGTTACAT
ATGATATTTTAATTTTATAATATACCGACTTCAAATCATGTAGTTTCACTTTCACACGTT
ACATTAGACCAAAAAGGAAGAAGCAGAGAAACTCCATGTTTAAAATGTCTCAATCAGTAA
ATCGGATAAGCCGACTAAAACATCAGACTAGCCTTGTGGCCCTACCATAATTAATCTCCT
TTGAAATTTTATTAAACAGATGGCAAAAAATACAATTCTGTACTATTTGTTAAATGTTGA
ATGGTTGCCTATAGCCTATACTTAACCCAATTCATTTTGTTTAACAGCACATTTTTTCTT
TTAGTAATATAAAAGAGTACTACTCAACGCATAACGAAAAAGTGTAAATTTGTTAACACG
ACGATCGGATCCTGCCTGAGCAAAAACGAAATCGTTTTCCGTTAGGGTGACAATGTCGAA
ACAAACGTACAAAGTCGGATTTTTTTTCCGGCGGCAGTTCACCATGGCTGCCGCGGAAGC
TCCGGCGGACATTAAGAGCCTATTTAAACGTTATTCCGACGACAGCGGAGTTATGAGCGT
CCAGAATCTTCATAGTTTCTTAATTGAGATCCAGAAGGAGAAAAATGTTAGCTTAGAGAA
CGCAGAAGCCATTATCAATAATCACGGCGGCGACTCCAAGCAGAAAGGCCTCCAGCTCGA
TGGCTTCTTCAAGTTTCTCTTTTCTGATGTTAATCCTCCTCTCGATCCTAAACTTGGGAT
TCACCATGATATGACTGCACCTCTGTCTCATTACTACATATACACAGGCCATAATTCATA
TTTAACTGGGAATCAACTGAGTAGTGATTGCAGTGATGTTCCCATAATACAAGCTCTTCA
GAGAAGTGTTAGAGTAATTGAATTAGATATTTGGCCAAATTCAGACAAAGATGATATAGA
AGTTCTACATGGAAGGACACTGACTGCTCCAGTGACGCTAATCAAATGTTTGAGGTCTAT
CAAGGAGCATGCCTTTTGTGCATCGGAGTATCCTCTTGTAATAACACTTGAAGATCATCT
CACGCCAGATCTTCAGGAAAAAGTAGCTGAGATGATCACTCAAACATTTGGAGAGATGCT
GTTTTCTCCTTCAGAAAGTTTGAAGGAGCTTCCTTCTCCGGAGTCACTGAGAAAGCGTGT
GATGATATCAACTAAGCCACCAAAAGAATACTTAAAATCCAAGGAAGTTAAGGAAAAAGA
TGACACGAAGAAAGAAGCTGAGGCAGCTTCAGAATACAAGCGCCTAATTGCCATTCATGC
TGGAAAGGGGAAAGGAGGACTATCTGATTGGTTGAGGGTTGACCTCAATAAAGTAAGACG
GCTTAGTCTCAGTGAACCAGAACTTGAAAAAGCTGTAGATACTCATGCAAAAGAAATTAT
CAGGTTCACTCAGCATAACTTGCTGAGAATATACCCAAAGGGCATTCGAGTTGACTCGTC
CAATTATGATCCTTTTGTTGGTTGGATGCACGGAGCTCAAATGGTAGCATTTAATATGCA
GGGTTATGGAAGATCACTTTGGTTGATGCATGGTATGTTCAGGGCTAATGGTGGCTGTGG
ATATGTTAAGAAACCTGATCTACTATTGAAAGCTGGTCCCGACAATGAGGTCTTCGATCC
TACAGCAAATTTGCCTGTCAAAACTACACTAAAGGTGACTGTATATATGGGTGATGGGTG
GGACAAAGACTTCGATCAGACAGACTTTGACACGTACTCACCTCCAGATTTCTATGCAAA
GCTAGGAATTGCTGGAGTTCCTGCTGATGAAGTAAAGAAGAGAACAGAGACGATAGACGA
CAATTGGATACCAAGCTGGAATGAGCAGTTTGAGTTTCCACTAACCGTTCCTGAGTTAGC
TCTACTTCGTATCAAAGTTCTTGATTATAATTTGTCCGACAAGGATGAGTTTGCTGGCCA
AACATGTCTACCTGTGGCAGAGCTGCGACAAGGTATCCGAGCAGTCCCACTCTATGATCG
GAAAGGAGAGAAGTACAGTTCTGTGAAGCTTCTCATGCATTTCGAGTTTAAATAACTTTG
TAGATCTTGAAAAGGGAGCTTTGCTAGTTTCATCTATGTGAAGCGTAGCAAAGTTTATAA
ACTATATACAAGTTACAACCACATGCAAAGTTGTAAGATATATATGTACCATCAGATAGA
GTACACACAGACTGATGGAAATAAGGTTAGTAAACAAAAAACAATAAAATTACTATGGGA
GAAAAATATGGGAAGATTGAAGATAGAAAATAAGATTGGTTAAATTTGAGAAATAACTTC
CCAAATAACCTCATGTATATGATGCCCCTTACCTT