Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g051540.3.1
CDS Infomation	Serine/threonine-protein kinase (AHRD V3.3 *** W0TR71_ACAMN)
Sequence	ATGACGACGCCCTCAGCCGCCGTCGCCACCCTCGTTTTCACCCTAGTAAATCTCTTCATT TATGTTCAAGCCTTAGGTGGCTCCGCCACCACTCTTGCCGTCGTCTATGGAAGTTCCGCT ACTATCTGCGGCATAATTGCTAACCAACCAATACAAACAATCCAATGTTGGAAAGACAAC CAATCTATTCCTACACCAATTTCACCTAACGTCTCCTTCGACTTCATCGCCGGCGGCTTC GACGGCTTCACCGCCGTTCGCTCCGGTGGATTTTCACTCCTTTTCTGGAACACGAGTTTC GTCCCCAAACGACTGTATTTCAGCAACTCAAACGTGTTAACATCCGTTACAATGGGTGGT GACAAAATTTGCGGCATAATGAAGAGTACAAAAAATGTTACCTGCTGGAGAGGCGATTTG AGTGAACCGTCAAATGGGTCATCACAATTTTTATCAATCTCATCTGGGTCTGAATTTTCG TGCGGAGTTTTGGAAAGTTCAAACAGGGTTGTCTGTTGGGGAAATAGTGCTATCGCTTCA ACTATCCAATCTGAGTTCCGTAATGAAAGGATGATGAATATATATGCCGGCGGAAGACAC GCTTGTGGGATGAACGCTACCGGATTTTTCATTTGCAGAGGTGATAATAAAAACGGTCAG CTTGATGTTCCTTCTCATTTGTCTTACGAGTATTTTGGATTTGCTTTGGGGATTAATCAT ACTTGTGGAATTCGTAGGGTGAATCGCACGGTAGTTTGTTGGGGCGGAAATGGTACATTT TCAAGTAATATAACAGAAGGATATTTTTTTGAATCAGTTTCAGCTGGGTTAGATTTTACG TGTGGATTAACCACAAGCAATTTTTCAGTGGTGTGTTGGGGGCCTGGTTGGACTAGTAAA ATGGTTCCTCAAGGGTTTGCCCTTCCTTTACCCATGATTCTTCCAGGTCCATGTGTACAA AGTAATTGTAGTTGTGGTATATATCCGCAGTCACAAAATCTCTGTTTTGGCAATGGTAAT ATTTGTAGGCCTTGTGATTTCTCAATTTTAACACCACCTACTTCACTACTACCGCCGCCA CCATCGCCACCTTCTTCTTCGCCTTCTAAAAGGCTAAGTAGAGGTTTATTAGCTTTTGCA ATTGTTGGGTCAGTGGGTACTTTGGCAGGGATTTGCAGTATAATTTATTTTCTGTGGGCT GGTGGTTGTTTTGGAAAGAAGAAAGTACATAATTCAGTTCAACCTACTATTACTGCTACT TCTAATGGTGGGCAATTATCAAGTAGTGGTCCTATTTCAAGATCATCAACTCTTAGGCGT CAAGGGTCGCGGTTGATGAGGCGTCAAAGGAGTGGAACTTCTTCTAAACACGCAGACAGG GCAGAGGAATTTCTGTTTACAGACCTTGCTGCAGCTACTAACAATTTTTCTCTAGAAAAC AAGATTGGTGCTGGTAGTTTTGGGGTGGTTTACAAGGGCAAACTACCGGATGGTCGTGAG GTAGCCATCAAACGTGGAGAAACGGGTACAAGAACAAAGAAATTTCAGGAGAAAGAAAGT GCATTTGACTCAGAATTAGCTTTCTTGTCTCGGCTACATCACAAACATTTAGTTAGACTT GTTGGTTATTGCGAAGAAAGGGATGAAAGGCTTTTGGTTTACGAGTACATGAAGAATGGA GCTCTTTTTGATCATTTACATGATAAGAACAATGTGGAGAAGACTAGTAGTATAGTGAAT TCTTGGAAAATGAGGATCAAGATTGCTTTAGACGCTGCCCGAGGCATTGAATACCTTCAC AACTATGCAGTTCCGCCTATAATTCACAGGGACATTAAGTCATCCAACATCTTGATTGAT GGAAACTGGATTGCAAGAGTGTCTGATTTTGGATTATCGTTAATGGGCGATCACAGCAGC AGGCCAATGAAGGCTGCTGGTACAGTTGGGTACATTGATCCGGAATACTATGGTCTGAAT GTGTTGACAGCAAAGAGCGATGTGTATGGACTTGGAGTGGTATTATTAGAACTTTTGACA GGAAAGAGAGCGATATTCAAGAGCGAAGAGAACGGAGGTGCACCAATGAGTGTAGTGGAC TATGGAGTAGCAGGAATTATGGCTGGAGAATTGAACAAGATTTTGGATAAGAGAGTAGGG ACTGCAGAGGCAAGTGAAGAAGTAGAAGCAGTGGAATTGGTGGCTTACACTGCAATGCAT TGTGTACATTTGGAAGGCAAAGACAGACCCACCATTTCTGATATTGTTTCTAATTTAGAG AGAGCTTTGGCTGCATTTGATGATAGCCATGGCAGCATCTCTAGTGGTCCAATTTCCTTT GTTTCTGATTGA

Peptide Sequence

PEP ID	Solyc06g051540.3.1
PEP Infomation	Serine/threonine-protein kinase (AHRD V3.3 *** W0TR71_ACAMN)
Sequence	MTTPSAAVATLVFTLVNLFIYVQALGGSATTLAVVYGSSATICGIIANQPIQTIQCWKDN QSIPTPISPNVSFDFIAGGFDGFTAVRSGGFSLLFWNTSFVPKRLYFSNSNVLTSVTMGG DKICGIMKSTKNVTCWRGDLSEPSNGSSQFLSISSGSEFSCGVLESSNRVVCWGNSAIAS TIQSEFRNERMMNIYAGGRHACGMNATGFFICRGDNKNGQLDVPSHLSYEYFGFALGINH TCGIRRVNRTVVCWGGNGTFSSNITEGYFFESVSAGLDFTCGLTTSNFSVVCWGPGWTSK MVPQGFALPLPMILPGPCVQSNCSCGIYPQSQNLCFGNGNICRPCDFSILTPPTSLLPPP PSPPSSSPSKRLSRGLLAFAIVGSVGTLAGICSIIYFLWAGGCFGKKKVHNSVQPTITAT SNGGQLSSSGPISRSSTLRRQGSRLMRRQRSGTSSKHADRAEEFLFTDLAAATNNFSLEN KIGAGSFGVVYKGKLPDGREVAIKRGETGTRTKKFQEKESAFDSELAFLSRLHHKHLVRL VGYCEERDERLLVYEYMKNGALFDHLHDKNNVEKTSSIVNSWKMRIKIALDAARGIEYLH NYAVPPIIHRDIKSSNILIDGNWIARVSDFGLSLMGDHSSRPMKAAGTVGYIDPEYYGLN VLTAKSDVYGLGVVLLELLTGKRAIFKSEENGGAPMSVVDYGVAGIMAGELNKILDKRVG TAEASEEVEAVELVAYTAMHCVHLEGKDRPTISDIVSNLERALAAFDDSHGSISSGPISF VSD*

Transcript Sequence

Transcript ID	Solyc06g051540.3.1
Transcript Infomation	Serine/threonine-protein kinase (AHRD V3.3 *** W0TR71_ACAMN)
Sequence	ATGACGACGCCCTCAGCCGCCGTCGCCACCCTCGTTTTCACCCTAGTAAATCTCTTCATT TATGTTCAAGCCTTAGGTGGCTCCGCCACCACTCTTGCCGTCGTCTATGGAAGTTCCGCT ACTATCTGCGGCATAATTGCTAACCAACCAATACAAACAATCCAATGTTGGAAAGACAAC CAATCTATTCCTACACCAATTTCACCTAACGTCTCCTTCGACTTCATCGCCGGCGGCTTC GACGGCTTCACCGCCGTTCGCTCCGGTGGATTTTCACTCCTTTTCTGGAACACGAGTTTC GTCCCCAAACGACTGTATTTCAGCAACTCAAACGTGTTAACATCCGTTACAATGGGTGGT GACAAAATTTGCGGCATAATGAAGAGTACAAAAAATGTTACCTGCTGGAGAGGCGATTTG AGTGAACCGTCAAATGGGTCATCACAATTTTTATCAATCTCATCTGGGTCTGAATTTTCG TGCGGAGTTTTGGAAAGTTCAAACAGGGTTGTCTGTTGGGGAAATAGTGCTATCGCTTCA ACTATCCAATCTGAGTTCCGTAATGAAAGGATGATGAATATATATGCCGGCGGAAGACAC GCTTGTGGGATGAACGCTACCGGATTTTTCATTTGCAGAGGTGATAATAAAAACGGTCAG CTTGATGTTCCTTCTCATTTGTCTTACGAGTATTTTGGATTTGCTTTGGGGATTAATCAT ACTTGTGGAATTCGTAGGGTGAATCGCACGGTAGTTTGTTGGGGCGGAAATGGTACATTT TCAAGTAATATAACAGAAGGATATTTTTTTGAATCAGTTTCAGCTGGGTTAGATTTTACG TGTGGATTAACCACAAGCAATTTTTCAGTGGTGTGTTGGGGGCCTGGTTGGACTAGTAAA ATGGTTCCTCAAGGGTTTGCCCTTCCTTTACCCATGATTCTTCCAGGTCCATGTGTACAA AGTAATTGTAGTTGTGGTATATATCCGCAGTCACAAAATCTCTGTTTTGGCAATGGTAAT ATTTGTAGGCCTTGTGATTTCTCAATTTTAACACCACCTACTTCACTACTACCGCCGCCA CCATCGCCACCTTCTTCTTCGCCTTCTAAAAGGCTAAGTAGAGGTTTATTAGCTTTTGCA ATTGTTGGGTCAGTGGGTACTTTGGCAGGGATTTGCAGTATAATTTATTTTCTGTGGGCT GGTGGTTGTTTTGGAAAGAAGAAAGTACATAATTCAGTTCAACCTACTATTACTGCTACT TCTAATGGTGGGCAATTATCAAGTAGTGGTCCTATTTCAAGATCATCAACTCTTAGGCGT CAAGGGTCGCGGTTGATGAGGCGTCAAAGGAGTGGAACTTCTTCTAAACACGCAGACAGG GCAGAGGAATTTCTGTTTACAGACCTTGCTGCAGCTACTAACAATTTTTCTCTAGAAAAC AAGATTGGTGCTGGTAGTTTTGGGGTGGTTTACAAGGGCAAACTACCGGATGGTCGTGAG GTAGCCATCAAACGTGGAGAAACGGGTACAAGAACAAAGAAATTTCAGGAGAAAGAAAGT GCATTTGACTCAGAATTAGCTTTCTTGTCTCGGCTACATCACAAACATTTAGTTAGACTT GTTGGTTATTGCGAAGAAAGGGATGAAAGGCTTTTGGTTTACGAGTACATGAAGAATGGA GCTCTTTTTGATCATTTACATGATAAGAACAATGTGGAGAAGACTAGTAGTATAGTGAAT TCTTGGAAAATGAGGATCAAGATTGCTTTAGACGCTGCCCGAGGCATTGAATACCTTCAC AACTATGCAGTTCCGCCTATAATTCACAGGGACATTAAGTCATCCAACATCTTGATTGAT GGAAACTGGATTGCAAGAGTGTCTGATTTTGGATTATCGTTAATGGGCGATCACAGCAGC AGGCCAATGAAGGCTGCTGGTACAGTTGGGTACATTGATCCGGAATACTATGGTCTGAAT GTGTTGACAGCAAAGAGCGATGTGTATGGACTTGGAGTGGTATTATTAGAACTTTTGACA GGAAAGAGAGCGATATTCAAGAGCGAAGAGAACGGAGGTGCACCAATGAGTGTAGTGGAC TATGGAGTAGCAGGAATTATGGCTGGAGAATTGAACAAGATTTTGGATAAGAGAGTAGGG ACTGCAGAGGCAAGTGAAGAAGTAGAAGCAGTGGAATTGGTGGCTTACACTGCAATGCAT TGTGTACATTTGGAAGGCAAAGACAGACCCACCATTTCTGATATTGTTTCTAATTTAGAG AGAGCTTTGGCTGCATTTGATGATAGCCATGGCAGCATCTCTAGTGGTCCAATTTCCTTT GTTTCTGATTGA