Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g050720.3.1
CDS Infomation	Ca(2+)-dependent nuclease family protein (AHRD V3.3 *** AT2G40410.2)
Sequence	ATGGGAAACGCTCTAAGATCTTTGTATGTTAATTGCTGCAAACCTTCAGCAGACTCTGAT TCCCTCACCCATCATCCTGGCGTTTCCGCTTTAGCACACGATCTCTACAACTTTGAAATC AACTCACAGGTTCCTCAAGGACTAAGTACGCATGTTGTATCATCCAAGAAGGCGCAATCT AACTGGTTTAAGAAACTTTCGGATGCGTGGAGAGAAACAAAGCCTCCTCCTAAAACACCC GAAGAAGCTTCAAGGTTTGTCATTCAGACCTTGAAGAGACATCAAAAAGCAGATGTTGAG GGGTTACTGGCTTTCTATGGTCTTCCTCTTCCTCACTCCTTAGTAGAACTAACTAGTGAT GGCACTCCTCCATCACACCAACAAGGGCTCAAGTTTGAATTGCATACTCTCCCTGTGGAC GCAAAGGCTGTGGCAGACGGAGATACAGTAACTGTATATGTTAGTACAACAGATCCTAGA GAGGCATCATGTCTCCCAAGAGACGTGCAAAATGCAGCTATTCAAAGATCAAAGGCACGG GCTCAGAAAAATTATGCAAAAGCAGATCAACTGCACAAACAGATCATAGATTCAGGATAT AGGTCAATACCAGTGAACCATGAGGAAGTTCTTGCTCGAAAATATAGAATCAGATTAAGG GGGATAGATGCACCAGAAAGTGCAATGCCATATGGTAAAGAGGCCAAGGAAGAACTGACT AAAGTTCTCCAGGGTAAGAGTTTAAGGGTCTTAGTTTTTGATGAAGATCGTTATGGCCGC TATGTAGGGGATATATACTGCAATGGCATATTTGCACAGGAAGTGATGTTAAAGAAGGGC TTGGCCTGGCACTATACTGCGTATGACAAGCGTCCAGAGTTAGATAAGTGGGAGAAAGAA GCTCGAGCAAAACGAATTGGCCTGTGGGCATCCAGAAATCCTGAAATGCCATGGGAGTGG AGGAAACAGAAACGCGAAAACCAACGTTCATGA

Peptide Sequence

PEP ID	Solyc06g050720.3.1
PEP Infomation	Ca(2+)-dependent nuclease family protein (AHRD V3.3 *** AT2G40410.2)
Sequence	MGNALRSLYVNCCKPSADSDSLTHHPGVSALAHDLYNFEINSQVPQGLSTHVVSSKKAQS NWFKKLSDAWRETKPPPKTPEEASRFVIQTLKRHQKADVEGLLAFYGLPLPHSLVELTSD GTPPSHQQGLKFELHTLPVDAKAVADGDTVTVYVSTTDPREASCLPRDVQNAAIQRSKAR AQKNYAKADQLHKQIIDSGYRSIPVNHEEVLARKYRIRLRGIDAPESAMPYGKEAKEELT KVLQGKSLRVLVFDEDRYGRYVGDIYCNGIFAQEVMLKKGLAWHYTAYDKRPELDKWEKE ARAKRIGLWASRNPEMPWEWRKQKRENQRS*

Transcript Sequence

Transcript ID	Solyc06g050720.3.1
Transcript Infomation	Ca(2+)-dependent nuclease family protein (AHRD V3.3 *** AT2G40410.2)
Sequence	ACCTACTTCTTCGTGATTGGTTCCTAAATTTGATCTAACAAAAGATTCTTCTTCTTCTAA CCTAAAAAGCTCAATAATAATAATAATCTCTGTTTGGGAATAATTTAGATCCGAAGAATG GGAAACGCTCTAAGATCTTTGTATGTTAATTGCTGCAAACCTTCAGCAGACTCTGATTCC CTCACCCATCATCCTGGCGTTTCCGCTTTAGCACACGATCTCTACAACTTTGAAATCAAC TCACAGGTTCCTCAAGGACTAAGTACGCATGTTGTATCATCCAAGAAGGCGCAATCTAAC TGGTTTAAGAAACTTTCGGATGCGTGGAGAGAAACAAAGCCTCCTCCTAAAACACCCGAA GAAGCTTCAAGGTTTGTCATTCAGACCTTGAAGAGACATCAAAAAGCAGATGTTGAGGGG TTACTGGCTTTCTATGGTCTTCCTCTTCCTCACTCCTTAGTAGAACTAACTAGTGATGGC ACTCCTCCATCACACCAACAAGGGCTCAAGTTTGAATTGCATACTCTCCCTGTGGACGCA AAGGCTGTGGCAGACGGAGATACAGTAACTGTATATGTTAGTACAACAGATCCTAGAGAG GCATCATGTCTCCCAAGAGACGTGCAAAATGCAGCTATTCAAAGATCAAAGGCACGGGCT CAGAAAAATTATGCAAAAGCAGATCAACTGCACAAACAGATCATAGATTCAGGATATAGG TCAATACCAGTGAACCATGAGGAAGTTCTTGCTCGAAAATATAGAATCAGATTAAGGGGG ATAGATGCACCAGAAAGTGCAATGCCATATGGTAAAGAGGCCAAGGAAGAACTGACTAAA GTTCTCCAGGGTAAGAGTTTAAGGGTCTTAGTTTTTGATGAAGATCGTTATGGCCGCTAT GTAGGGGATATATACTGCAATGGCATATTTGCACAGGAAGTGATGTTAAAGAAGGGCTTG GCCTGGCACTATACTGCGTATGACAAGCGTCCAGAGTTAGATAAGTGGGAGAAAGAAGCT CGAGCAAAACGAATTGGCCTGTGGGCATCCAGAAATCCTGAAATGCCATGGGAGTGGAGG AAACAGAAACGCGAAAACCAACGTTCATGAATAACTACTTCAACAGAGAGTTGCCCTAAA ACATTATAGGCACAAGGAAGTCACAGTAATGTTGTTGTATTCGATTGTCAAATTGTGTTA ATATAGAGGAGTTGCAATGAAGAAGCTACATCTCCTAGTAATTTAATACCAAGGAAGCCA AATTTAGTGTGTACTTGGGCATCCTTGTGGTATATTGTATATCTATTTCTCAGGTGCTTC TATATCTATGACCATCAAAACGTTTTCCTCTTCCTCTTTTTATTCGTCATTCATAGTTAA GCAACCTAACTTAGCTTCCTGTACCAAAATAAACTACAAAATATACCAATGTTTGCTGCA GTTGGACAACTCTCTAACAAACATGACTTGAAAGCAAAATCCACTGAAGCTGGCTTGACG AACTAAACAAAGAATAATCACCTTTTTCAGTTTTCTTCCCAGTTAAACCAGAATTACAAG ATCAAACCACCAATGACACAACGAAAACCAAAACTAATTAAAAATAATGTTATTTGCTAA CAGTCCAGTCAGAACTATGGACATGGAGTACTTCAAGTGAATAAAAAAAAAGATATCATG GAGATCAGAACAGCAGGTCCAGTTGAATGTCTGTTACCAAACTGCAAGGTACTGACGGCT CGCATATGGATAGCACAAAATTACAATGCCACAGCTTGTTTAACCCATGAAAAGAGCTTC AATTTTGCTTTGCGTCCTCCACAGTATCATCAGAATCAGAATCACTGGCATTATAGCCTA AAAAGGAAGAAAAGATGAAC