Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g050550.3.1
CDS Infomation

sorting nexin 2B (AHRD V3.3 *** AT5G07120.2)
Sequence

ATGATGGGATATGAGAATCAAGAGTCCCACCTTTATGCATCCAAAAAGGAGATGGAATCC
CTGGTACTCGACGACGATTCTCCCAACGGCACTTCTCATCCTTTCTCCGATCCACTTTCA
TCATCATCATCTCTTCCTTTCGCTGAAATCCCTACTGACCAAGGTCAAACCCCTAATTCT
TCCTTCAATTCCATCCTCGAACCTCCTTCTTATGCTGAGGCTATTTTCAGATCCTTTGAC
GCTGATCACTCCTCTCCTCAACTCAACGGCGCTCATGATCACTCTATCGCTTCTCCTTCT
TCACTTCCATCCTCCGACGACTTTTTGACCATTACCGTTTCCGATCCACAGAAAGAGCAA
GAGTTGTCCAATTCTCTAGTTCCTGGGGGGACTGCTTATGTTACCTACCTAATTACTACC
AGGACGAATTTACCGGAATTTGATGGAACTGAATTTAGTGTGAGGAGGAGGTTTAGAGAT
GTGGTCACTTTGTCCGACCGATTAGCTGAGTCGTATAGAGGTTTTTTCATTCCGATAAGA
CCGGATAAGAGTGTTGTTGAGAGTCAGGTGATGCAGAAACAGGAATTTGTGGAACAGAGG
AGAGCAGCACTGGAGAAGTACCTCAGGAGATTAGCTGCGCATCCTGTGATAAGGAGGAGT
GAGGAGCTAAGAATGTTTTTGGAGGCGAATGGGAAGCTTCCGCTGGTGAGGACAACAGAT
GTGGCATCCAGGATGTTGGATGGGGCAGTGCAGTTACCCAAGCAGATTTTTGGTGAGACA
GCAGGGGGAATGGTGGATGCCAATGAGGTAGCTCAGCCTGCCAAGGGAGGTAGGGACCTG
TTGAGAATCTTTAGGGAGTTGAAACAATCTGTGTCAAATGATTGGGGTGGTGTGAAGCCA
CCTGTAGTGGAGGAGGATAAGGAGTTATTGGAAAAGAAGCAGAAGTTGCATGATTTTGAG
CAGCAGCTCAGCAATGTGTCTCAGCAGGCCGAAGCACTTGTAAAATCTCAGCAGGATATT
GGAGAAACCATGGGCCAAATGGGCCTAGCTTTTGTCAAGTTAACAAAGTTTGAGACGGAG
CGAGCTGTTTATGATTCACAAAGAACAAGGGCTGCAGATATGAAGAATGTGGCAACTGCT
TCTGTTAAGGCAAGCAGACTATATAGGGAGCTAAATGCTCAAACTGTCAAACATTTGGAT
AAGCTCCATGAATACCTTGGAGTGATGTTAGCTGTGAACAATGCATTTTCCGATAGGTCA
AGTGCTCTTTTGACAGTACAGACATTGTTGTCTGAGCTGTCATCACTAAATTCGAGGATC
GAAAAACTTGAAGCTGCTGCGTCTAAGATATTTGGTGGGGACAGGGCCAGAATTCGCAAA
ATAGAAGAGCTCAAGGAAACACATAGAGAAACTGAAGATGCCAAAAGTTCTGCTGTGAGG
GAGTATGAGCGGATCAAGGAAAACAACAAGAGTGAGCTTGCGAGATTTGAGAAGGAACGA
CGTGATGACTTCTTGGGAATGTTGAGAGGATTTGTTGTCAATCAGGCAGGATATGCGGAA
AAGATGGCGAATGTTTGGGAGACGGTGGCAGACGAAACAAAGGGATATGCAAAACATGGT
AGCTGA

Peptide Sequence

PEP ID

Solyc06g050550.3.1
PEP Infomation

sorting nexin 2B (AHRD V3.3 *** AT5G07120.2)
Sequence

MMGYENQESHLYASKKEMESLVLDDDSPNGTSHPFSDPLSSSSSLPFAEIPTDQGQTPNS
SFNSILEPPSYAEAIFRSFDADHSSPQLNGAHDHSIASPSSLPSSDDFLTITVSDPQKEQ
ELSNSLVPGGTAYVTYLITTRTNLPEFDGTEFSVRRRFRDVVTLSDRLAESYRGFFIPIR
PDKSVVESQVMQKQEFVEQRRAALEKYLRRLAAHPVIRRSEELRMFLEANGKLPLVRTTD
VASRMLDGAVQLPKQIFGETAGGMVDANEVAQPAKGGRDLLRIFRELKQSVSNDWGGVKP
PVVEEDKELLEKKQKLHDFEQQLSNVSQQAEALVKSQQDIGETMGQMGLAFVKLTKFETE
RAVYDSQRTRAADMKNVATASVKASRLYRELNAQTVKHLDKLHEYLGVMLAVNNAFSDRS
SALLTVQTLLSELSSLNSRIEKLEAAASKIFGGDRARIRKIEELKETHRETEDAKSSAVR
EYERIKENNKSELARFEKERRDDFLGMLRGFVVNQAGYAEKMANVWETVADETKGYAKHG
S*

Transcript Sequence

Transcript ID

Solyc06g050550.3.1
Transcript Infomation

sorting nexin 2B (AHRD V3.3 *** AT5G07120.2)
Sequence

GTAGGTTAGGTAGTGATTAGAATTGTAATTTATTTATTTGACAGAGATTAGAGTTATAAT
TGAACAAGTATTCAAATTAAATCCAAAACTAGTCCTACTAGAGATGTGGCTAAAATGTAG
TACAAGTTCAACTGGTATGCGTTATCGACACATGCTGTTCACGTGCTTCTACTTCAGGTT
TTGGTCTCACCGTCGACAGACTTAGATCTCCCTTGCCGTAACAACTCTTCCTTCTTCCCG
GCGAACTTCACTCTCTTCTCTCTCTCTCATCTCAGTCAGTATTCCAGCAGTAAACATGAT
GGGATATGAGAATCAAGAGTCCCACCTTTATGCATCCAAAAAGGAGATGGAATCCCTGGT
ACTCGACGACGATTCTCCCAACGGCACTTCTCATCCTTTCTCCGATCCACTTTCATCATC
ATCATCTCTTCCTTTCGCTGAAATCCCTACTGACCAAGGTCAAACCCCTAATTCTTCCTT
CAATTCCATCCTCGAACCTCCTTCTTATGCTGAGGCTATTTTCAGATCCTTTGACGCTGA
TCACTCCTCTCCTCAACTCAACGGCGCTCATGATCACTCTATCGCTTCTCCTTCTTCACT
TCCATCCTCCGACGACTTTTTGACCATTACCGTTTCCGATCCACAGAAAGAGCAAGAGTT
GTCCAATTCTCTAGTTCCTGGGGGGACTGCTTATGTTACCTACCTAATTACTACCAGGAC
GAATTTACCGGAATTTGATGGAACTGAATTTAGTGTGAGGAGGAGGTTTAGAGATGTGGT
CACTTTGTCCGACCGATTAGCTGAGTCGTATAGAGGTTTTTTCATTCCGATAAGACCGGA
TAAGAGTGTTGTTGAGAGTCAGGTGATGCAGAAACAGGAATTTGTGGAACAGAGGAGAGC
AGCACTGGAGAAGTACCTCAGGAGATTAGCTGCGCATCCTGTGATAAGGAGGAGTGAGGA
GCTAAGAATGTTTTTGGAGGCGAATGGGAAGCTTCCGCTGGTGAGGACAACAGATGTGGC
ATCCAGGATGTTGGATGGGGCAGTGCAGTTACCCAAGCAGATTTTTGGTGAGACAGCAGG
GGGAATGGTGGATGCCAATGAGGTAGCTCAGCCTGCCAAGGGAGGTAGGGACCTGTTGAG
AATCTTTAGGGAGTTGAAACAATCTGTGTCAAATGATTGGGGTGGTGTGAAGCCACCTGT
AGTGGAGGAGGATAAGGAGTTATTGGAAAAGAAGCAGAAGTTGCATGATTTTGAGCAGCA
GCTCAGCAATGTGTCTCAGCAGGCCGAAGCACTTGTAAAATCTCAGCAGGATATTGGAGA
AACCATGGGCCAAATGGGCCTAGCTTTTGTCAAGTTAACAAAGTTTGAGACGGAGCGAGC
TGTTTATGATTCACAAAGAACAAGGGCTGCAGATATGAAGAATGTGGCAACTGCTTCTGT
TAAGGCAAGCAGACTATATAGGGAGCTAAATGCTCAAACTGTCAAACATTTGGATAAGCT
CCATGAATACCTTGGAGTGATGTTAGCTGTGAACAATGCATTTTCCGATAGGTCAAGTGC
TCTTTTGACAGTACAGACATTGTTGTCTGAGCTGTCATCACTAAATTCGAGGATCGAAAA
ACTTGAAGCTGCTGCGTCTAAGATATTTGGTGGGGACAGGGCCAGAATTCGCAAAATAGA
AGAGCTCAAGGAAACACATAGAGAAACTGAAGATGCCAAAAGTTCTGCTGTGAGGGAGTA
TGAGCGGATCAAGGAAAACAACAAGAGTGAGCTTGCGAGATTTGAGAAGGAACGACGTGA
TGACTTCTTGGGAATGTTGAGAGGATTTGTTGTCAATCAGGCAGGATATGCGGAAAAGAT
GGCGAATGTTTGGGAGACGGTGGCAGACGAAACAAAGGGATATGCAAAACATGGTAGCTG
AGAAGTTGCTGTATATAATGGCCTTTAGCATCTGCCTTTCTTTTATCTATTTTTAGTCCC
TTTGTTTTGTATTGTACTTTATTTGTATACAAGCTTAGAGACATGTTCATATCTTAGGCA
TAGATGTTTGATCCAACATATTTTTCCTCGTAGAGTTCTAATTGATAACATGTGGGAATT
TTCATTTAACAAAACTTTCCCCAGACATATTTATTTGTTGAGTTTCACAGCTAAGTTCAC
ATGATAAAGGCCAGAGCCCGACACTAGGAGTAGGAAGAACAGGAAAAACCTTTGAGAACT
TCAAACTACACCTGCAAATGTCATGAAATCTCTTTCTTAAATAATAATATTTGATTGACT
CCAGTTTGTTGGATTTCACAGAAAA