Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g050350.3.1
CDS Infomation

weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *** AT2G38370.2)
Sequence

ATGGCTGAAACTAAGAAAATAATCAATCCAAGAGTGGAAATTGATACATCTCCGCCTTTC
GAGTCAGTTAAAGAAGCTGTCGATCATTTTGGGGGCAGTGGCCCTTGGATTCCCCATCAC
TTGCTCCGTTTACCACCTCCCGACAATGATTCTGAAGTTGTAGACGTGGGGAAAATGGAG
GAGCAAGCAGTAAAATTTGAGAAAGATTTGATTGTGAAGGAACAAGAAGCCCTCAATGTC
TTGAGAGAAGTGGAAGAAGCTAAAAGATTTGTAGAAGGATTGAAAGTAAATTTGATGCAA
GAAGTTTCTGAGTTTGTGTCCAGTCCCGGTGTACATCCGGAGAACCAAATTCCAAATCTT
AATGAGCTGTCAGCAGAAAACTTAAGTCTATGCCCTCTTCAGTCCCCAGGGCATGTACTA
ATGGAATTAAACCGAGCAAAATTAGACCTTAACAAGATGTCGACAGACCTTACTGTGATT
AGATCTTCTGTTGAGACTCTGAATAAGAAAATGAAGAAAGAAAAGGTAATTCTTGACAGA
AGCAGTCAGATGAAATCCCTTGATTCAGCAGCAGGGTTCTCCATTGAGGAAAAAAACACT
ATGAACAACGAGCTCCTGCAGTTGAGCTTTGAAGCAGACCAATTCAAGAAAATGGCAGAA
GCTTCAAGGTATGAGGTGATGAAAGCGATGTCAGAGATTGAACGAACAAAGGCGAGTATT
AGAATGGCTGAAATGAGATTACATGCAGCCAAAAAGATGGAAGAAGCAGCTAAAGCTGTG
GAAGCAATTGCTTTTGCGGAACGAAAGGCTTTACTAAATGGAAAGAAGTCTTCAACTGTT
GTTCAGCACACAACTGAGGGCATCACAATTTCATATGAAGAATATTATGCTCTTGCCCGA
AAAGCACAGCAAGCTGAAGAGCTATGCAAAACAAAATTTGTAGACACAAACACTATGCAC
AGAACTAATGAAGCAAACCAATCTGAGGTGTCTATTACAAAGAAGATGGAGGAGACTACC
AAAGAAATTAGACACAACCGGAGTACTCTAGAAGAGGCTTTGGACAACGAAGATGGTACT
CAAAGAAGTCGTCTTATTGAACAAGATGGTTTCTACAGGGAGAGATCAGAACACACTCAA
TTGCATTACTCGGGGCATAATACCTCAGTCAAATCTAAGTTCAGAAACCCTCAGTCATCT
CTCACTAGTCATGGGAACCCTCGGCTAGCTGATGACAACGAAGCAGACAATGTCAATGAC
AAGTCAGTCCCAGTCTTTCGATCATCAATATCAATTGGAGACATACTAAGTAGGAAGCTG
ATTTTGCGAGATGATCATATTGTCGTGGGTAAGCATATGGAAAGCCACACCGAAAGAAAG
CACGTGTCGTTTAGCCAAATGTTGAGGGAACAGAGTGGGATCATATTGAATCCCACAAAA
GCTATGAAAGAAGGGGATGTACACAAGCAGTTTATTACACATAAGAAGAAGTTTGGTTTC
ATCCAAGTACCACTTCCCAGACAGAATAAGAAAAAGACACAGCCTTTGAACATGAGATGA

Peptide Sequence

PEP ID

Solyc06g050350.3.1
PEP Infomation

weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *** AT2G38370.2)
Sequence

MAETKKIINPRVEIDTSPPFESVKEAVDHFGGSGPWIPHHLLRLPPPDNDSEVVDVGKME
EQAVKFEKDLIVKEQEALNVLREVEEAKRFVEGLKVNLMQEVSEFVSSPGVHPENQIPNL
NELSAENLSLCPLQSPGHVLMELNRAKLDLNKMSTDLTVIRSSVETLNKKMKKEKVILDR
SSQMKSLDSAAGFSIEEKNTMNNELLQLSFEADQFKKMAEASRYEVMKAMSEIERTKASI
RMAEMRLHAAKKMEEAAKAVEAIAFAERKALLNGKKSSTVVQHTTEGITISYEEYYALAR
KAQQAEELCKTKFVDTNTMHRTNEANQSEVSITKKMEETTKEIRHNRSTLEEALDNEDGT
QRSRLIEQDGFYRERSEHTQLHYSGHNTSVKSKFRNPQSSLTSHGNPRLADDNEADNVND
KSVPVFRSSISIGDILSRKLILRDDHIVVGKHMESHTERKHVSFSQMLREQSGIILNPTK
AMKEGDVHKQFITHKKKFGFIQVPLPRQNKKKTQPLNMR*

Transcript Sequence

Transcript ID

Solyc06g050350.3.1
Transcript Infomation

weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *** AT2G38370.2)
Sequence

TGTCTAGTCAAAAAGTAATGTTGTAATCAAAATTGTAGGTGCGTCACAACTCACAACTGT
GTGAGTATATATAATGCAGAGGAAGAGTGCACCCTGCTGCTGTGGTACTCAGTATATTGA
TTGAATAGTACAGTACAAGTGCTATGGCTGAAACTAAGAAAATAATCAATCCAAGAGTGG
AAATTGATACATCTCCGCCTTTCGAGTCAGTTAAAGAAGCTGTCGATCATTTTGGGGGCA
GTGGCCCTTGGATTCCCCATCACTTGCTCCGTTTACCACCTCCCGACAATGATTCTGAAG
TTGTAGACGTGGGGAAAATGGAGGAGCAAGCAGTAAAATTTGAGAAAGATTTGATTGTGA
AGGAACAAGAAGCCCTCAATGTCTTGAGAGAAGTGGAAGAAGCTAAAAGATTTGTAGAAG
GATTGAAAGTAAATTTGATGCAAGAAGTTTCTGAGTTTGTGTCCAGTCCCGGTGTACATC
CGGAGAACCAAATTCCAAATCTTAATGAGCTGTCAGCAGAAAACTTAAGTCTATGCCCTC
TTCAGTCCCCAGGGCATGTACTAATGGAATTAAACCGAGCAAAATTAGACCTTAACAAGA
TGTCGACAGACCTTACTGTGATTAGATCTTCTGTTGAGACTCTGAATAAGAAAATGAAGA
AAGAAAAGGTAATTCTTGACAGAAGCAGTCAGATGAAATCCCTTGATTCAGCAGCAGGGT
TCTCCATTGAGGAAAAAAACACTATGAACAACGAGCTCCTGCAGTTGAGCTTTGAAGCAG
ACCAATTCAAGAAAATGGCAGAAGCTTCAAGGTATGAGGTGATGAAAGCGATGTCAGAGA
TTGAACGAACAAAGGCGAGTATTAGAATGGCTGAAATGAGATTACATGCAGCCAAAAAGA
TGGAAGAAGCAGCTAAAGCTGTGGAAGCAATTGCTTTTGCGGAACGAAAGGCTTTACTAA
ATGGAAAGAAGTCTTCAACTGTTGTTCAGCACACAACTGAGGGCATCACAATTTCATATG
AAGAATATTATGCTCTTGCCCGAAAAGCACAGCAAGCTGAAGAGCTATGCAAAACAAAAT
TTGTAGACACAAACACTATGCACAGAACTAATGAAGCAAACCAATCTGAGGTGTCTATTA
CAAAGAAGATGGAGGAGACTACCAAAGAAATTAGACACAACCGGAGTACTCTAGAAGAGG
CTTTGGACAACGAAGATGGTACTCAAAGAAGTCGTCTTATTGAACAAGATGGTTTCTACA
GGGAGAGATCAGAACACACTCAATTGCATTACTCGGGGCATAATACCTCAGTCAAATCTA
AGTTCAGAAACCCTCAGTCATCTCTCACTAGTCATGGGAACCCTCGGCTAGCTGATGACA
ACGAAGCAGACAATGTCAATGACAAGTCAGTCCCAGTCTTTCGATCATCAATATCAATTG
GAGACATACTAAGTAGGAAGCTGATTTTGCGAGATGATCATATTGTCGTGGGTAAGCATA
TGGAAAGCCACACCGAAAGAAAGCACGTGTCGTTTAGCCAAATGTTGAGGGAACAGAGTG
GGATCATATTGAATCCCACAAAAGCTATGAAAGAAGGGGATGTACACAAGCAGTTTATTA
CACATAAGAAGAAGTTTGGTTTCATCCAAGTACCACTTCCCAGACAGAATAAGAAAAAGA
CACAGCCTTTGAACATGAGATGATCTGCCCTTCCTCTTACATCAGTCTTATACTTGTTTA
CTCGGCTTGCACATCTTTTCGATTTTTTTTTGCAGTGTGTATTATCTGTTGTGTTTGTGA
TTTGTGATTACTGAGCGTTGCCGTTTTCTCTTCATGATTGGTGTAAAGCTCCTCTTGAAG
CTAACGATCTTGTGCATTTTTATGGAAAAAACATTGAGACAGAAAATGTACTATACCATC
CTCATCATGTTACA