Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g050160.3.1
CDS Infomation

Homeobox leucine zipper protein (AHRD V3.3 *** A0A072TNH2_MEDTR)
Sequence

ATGGACTTCAACCAGGTGCAAAATTGGTTCCAGAATAAAAGAACCCAAATGAAGTTGCAA
TCGGAATGGTATGAAAATAAGATTATGAAGCAAGATAATGACAAGCTTCGCGTAGAGCAT
AGTGTAACAAAGGAAGCCCTGGAAAATTCAATCCGTGAGAAACATAGTAAAGAAAAGGTT
GATGAGAATCAAACAAAGATTGAGCATGATCAATTGGAAGATGAAGTTAAGAGGCTTGCC
TACAAATTAAGCTTATTTAATAAAGTTGTAGCGCATGATAATATTGTGTTATTGAATCTT
GGCTTGGATGCCTTCAATGAGCTTTTTAGGCTATACGAAAATGGTAACCCTCTTTGGATT
AGCAAATTGGATGGAAGTGGAGAAATGCTAAATATTGAGGAATATGATCGATTATTTATC
CCATTAATCGATACAAAACCTGAATATTTTACAATGGAAGGCACAAGGGCATCATGTATA
GTGGCTGACACCAGTATGGCATTGGTGAATATGCTGATGGATAAGAATCAGTGGGTAGAT
ATGTTTCCATGCATTGTTGGAAAAACATATGCTACTGATGTGATTTCAACTGGCATGGCT
GGAAATAAGAGCACTTCTCTTCTATTGATTAAAACTGAATTTCAAATCATTTCTGACCTA
GTTTCTGTTCGCGAAGTTGAATTTCTTCGCTTCTGTAAGAAACATGCTGAAGATGTCTGG
GCTATTGTTGATGTATCTATCGACGAAATTAAAAGTTGCCGCAGGCTCCCATCTGGCTGT
ATTTTACGAGATATGCCAGATGGTTTTTGTAAGGTTACTTGGATCGAGCACACGGAATAT
AATGAAAATCTTGTCCACGAATGGTATCGCTCTTTGATAAAGGCTGTTGAGTTAAGTGGT
GAGAGAGGTATAAGAAAAATGGCTCAACGAATGACAGATATGTTTTGTACGGGGGTTTGT
GGAACCAAGCATAACTGGGAACTAATTCAACCAGCAACTAACGAAAATCCAAAGTTAATG
ATGAGGACTAATGTAAGTGACCCAAGTGAATACGTTGGTGTGATATTAAGTGCTACAAAG
ACCATCTGGTTACCGACGCAACAACAAACGTTGTTCAAATTCTTCAATAATGAACAAACA
AGGAGCCAGTGGGATGTATTGTACAACAATTCTACCATGGAACGAATGATCCAATTTTCT
AAGGGTCAAAACATCGACAGCAACATTTCTATTTATTTTGCTCATGGGGATGAATCTTGT
GCTAGTCGAGTGATTTTGCAAGATACGTGCACGGATGAAAGTGGATCAATTTTGGTTTAT
GCTACAATTGGTTCTCAAGAAATGGATAAAGTGATTGATGGGGGAGACTCTTCTTGGGTG
GCTCTCTTCTCAAATGGAATAGCAATAGCGCCCGATTGTAATCGCAATCTTTTGGCAGCT
AATGATACTTGTGAGGAGATGGATAATGGGTTCGAAGATGGATCAATGGTGACTATCAAT
TTTCAAATGATGGGGAACATGCTTCCAGATACAACTCTTTCTATGGAGTTGGTCAAACAA
GCAAATGGACTCATCTCACACACTGTTCACAAGATCAAGAGTGCTCTGAAATGCTGGTGA

Peptide Sequence

PEP ID

Solyc06g050160.3.1
PEP Infomation

Homeobox leucine zipper protein (AHRD V3.3 *** A0A072TNH2_MEDTR)
Sequence

MDFNQVQNWFQNKRTQMKLQSEWYENKIMKQDNDKLRVEHSVTKEALENSIREKHSKEKV
DENQTKIEHDQLEDEVKRLAYKLSLFNKVVAHDNIVLLNLGLDAFNELFRLYENGNPLWI
SKLDGSGEMLNIEEYDRLFIPLIDTKPEYFTMEGTRASCIVADTSMALVNMLMDKNQWVD
MFPCIVGKTYATDVISTGMAGNKSTSLLLIKTEFQIISDLVSVREVEFLRFCKKHAEDVW
AIVDVSIDEIKSCRRLPSGCILRDMPDGFCKVTWIEHTEYNENLVHEWYRSLIKAVELSG
ERGIRKMAQRMTDMFCTGVCGTKHNWELIQPATNENPKLMMRTNVSDPSEYVGVILSATK
TIWLPTQQQTLFKFFNNEQTRSQWDVLYNNSTMERMIQFSKGQNIDSNISIYFAHGDESC
ASRVILQDTCTDESGSILVYATIGSQEMDKVIDGGDSSWVALFSNGIAIAPDCNRNLLAA
NDTCEEMDNGFEDGSMVTINFQMMGNMLPDTTLSMELVKQANGLISHTVHKIKSALKCW*

Transcript Sequence

Transcript ID

Solyc06g050160.3.1
Transcript Infomation

Homeobox leucine zipper protein (AHRD V3.3 *** A0A072TNH2_MEDTR)
Sequence

ATGGACTTCAACCAGGTGCAAAATTGGTTCCAGAATAAAAGAACCCAAATGAAGTTGCAA
TCGGAATGGTATGAAAATAAGATTATGAAGCAAGATAATGACAAGCTTCGCGTAGAGCAT
AGTGTAACAAAGGAAGCCCTGGAAAATTCAATCCGTGAGAAACATAGTAAAGAAAAGGTT
GATGAGAATCAAACAAAGATTGAGCATGATCAATTGGAAGATGAAGTTAAGAGGCTTGCC
TACAAATTAAGCTTATTTAATAAAGTTGTAGCGCATGATAATATTGTGTTATTGAATCTT
GGCTTGGATGCCTTCAATGAGCTTTTTAGGCTATACGAAAATGGTAACCCTCTTTGGATT
AGCAAATTGGATGGAAGTGGAGAAATGCTAAATATTGAGGAATATGATCGATTATTTATC
CCATTAATCGATACAAAACCTGAATATTTTACAATGGAAGGCACAAGGGCATCATGTATA
GTGGCTGACACCAGTATGGCATTGGTGAATATGCTGATGGATAAGAATCAGTGGGTAGAT
ATGTTTCCATGCATTGTTGGAAAAACATATGCTACTGATGTGATTTCAACTGGCATGGCT
GGAAATAAGAGCACTTCTCTTCTATTGATTAAAACTGAATTTCAAATCATTTCTGACCTA
GTTTCTGTTCGCGAAGTTGAATTTCTTCGCTTCTGTAAGAAACATGCTGAAGATGTCTGG
GCTATTGTTGATGTATCTATCGACGAAATTAAAAGTTGCCGCAGGCTCCCATCTGGCTGT
ATTTTACGAGATATGCCAGATGGTTTTTGTAAGGTTACTTGGATCGAGCACACGGAATAT
AATGAAAATCTTGTCCACGAATGGTATCGCTCTTTGATAAAGGCTGTTGAGTTAAGTGGT
GAGAGAGGTATAAGAAAAATGGCTCAACGAATGACAGATATGTTTTGTACGGGGGTTTGT
GGAACCAAGCATAACTGGGAACTAATTCAACCAGCAACTAACGAAAATCCAAAGTTAATG
ATGAGGACTAATGTAAGTGACCCAAGTGAATACGTTGGTGTGATATTAAGTGCTACAAAG
ACCATCTGGTTACCGACGCAACAACAAACGTTGTTCAAATTCTTCAATAATGAACAAACA
AGGAGCCAGTGGGATGTATTGTACAACAATTCTACCATGGAACGAATGATCCAATTTTCT
AAGGGTCAAAACATCGACAGCAACATTTCTATTTATTTTGCTCATGGGGATGAATCTTGT
GCTAGTCGAGTGATTTTGCAAGATACGTGCACGGATGAAAGTGGATCAATTTTGGTTTAT
GCTACAATTGGTTCTCAAGAAATGGATAAAGTGATTGATGGGGGAGACTCTTCTTGGGTG
GCTCTCTTCTCAAATGGAATAGCAATAGCGCCCGATTGTAATCGCAATCTTTTGGCAGCT
AATGATACTTGTGAGGAGATGGATAATGGGTTCGAAGATGGATCAATGGTGACTATCAAT
TTTCAAATGATGGGGAACATGCTTCCAGATACAACTCTTTCTATGGAGTTGGTCAAACAA
GCAAATGGACTCATCTCACACACTGTTCACAAGATCAAGAGTGCTCTGAAATGCTGGTGA
TACCATCCATGGATTTGTTATGTGTTTTAACTCTCTTATGTATTTCTTGTTTTGGATCAT
AATAATATTAGCAGATTGAACTATTTTGAGTTTATCTAAGACAATTC