Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g048730.3.1
CDS Infomation

Uroporphyrinogen decarboxylase (AHRD V3.3 *** K4C5B9_SOLLC)
Sequence

ATGTCTTGTATTTACAGTTCAGTCTCTTCTTTCTCAATTTCATCTAAATCGTCTTCTTCT
TCTCGCTCTAAATTCAAGCCCAGAATCTCTTGTTCCGTTGGAGGAACTGTTGCTGAACCA
AAAACTATAAATGCAACAGAGCCTTTGTTGCTTGATGCTGTTCGGGGTAAAGAAGTAGAA
AGGCCTCCTGTTTGGCTTATGAGACAAGCAGGGAGGTACATGAAGAGTTATCAAATCTTA
TGTGAGAAGCACCCATCCTTTCGTGAGAGATCAGAAAATGTAGATCTTGTGGTAGAAATT
TCTCTGCAGCCATGGAAAGTATTCCAGCCTGATGGGGTCATTTTGTTTTCAGATATTCTT
ACTCCTCTCTCTGGTATGAACATCCCTTTTGACATTATAAAGGGGAAGGGTCCTGTCATA
TTTGATCCACCGACCACACTTTCTGATGTTGAGAAAGTTAGAGAATTTATTCCTGAAGAA
TCAGTTCCATATGTTGGAGAAGCATTAACAATTTTGCGGAAAGAGGTAAATAATCAAGCA
GCAGTTCTGGGTTTCGTTGGGGCACCATTTACGTTGGCTTCATATGTGGTTGAAGGTGGT
TCCTCTAAGAACTTTACAAAAATTAAGAGATTAGCTTTTGCGGAGCCCAAGGTCCTTCAT
TCGCTGCTTCAAATATTTGCAACCTCAATGGCTAAATATATCCGTTATCAAGCTGACCAT
GGAGCTCAAGCAGTTCAGATCTTTGATTCATGGGCCACAGAGCTAAGCCCAGTCGATTTT
GAGGAGTTCAGTCTACCATACTTAAAACAGATAGTTGAGGCAGTGAAACTAACCCATCCT
GATCTCCCTCTGATTCTTTATGCAAGTGGATCAGGTGGCTTGCTTGAGAGACTACCCTTG
ACAGGAGTAGATGTAGTCAGTTTGGACTGGACAGTTGATATGGCTGATGGTAGGAGACGA
CTGGGTCCTAATGTGGCTATACAAGGTAATGTGGATCCTGGAGTTCTCTTTGGCTCCAAG
GAATTTATTACCAACCGGATAAATGATACAGTGAAGAAAGCTGGTAAAGGGAAACATATT
TTGAACCTTGGACATGGCATCAAAGTAGGTACACCTGAGGAAAATGTTGCTCACTTCTTT
GAGGTTGCTAAAGGTCTTAGGTATTAG

Peptide Sequence

PEP ID

Solyc06g048730.3.1
PEP Infomation

Uroporphyrinogen decarboxylase (AHRD V3.3 *** K4C5B9_SOLLC)
Sequence

MSCIYSSVSSFSISSKSSSSSRSKFKPRISCSVGGTVAEPKTINATEPLLLDAVRGKEVE
RPPVWLMRQAGRYMKSYQILCEKHPSFRERSENVDLVVEISLQPWKVFQPDGVILFSDIL
TPLSGMNIPFDIIKGKGPVIFDPPTTLSDVEKVREFIPEESVPYVGEALTILRKEVNNQA
AVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHSLLQIFATSMAKYIRYQADH
GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKLTHPDLPLILYASGSGGLLERLPL
TGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGKHI
LNLGHGIKVGTPEENVAHFFEVAKGLRY*

Transcript Sequence

Transcript ID

Solyc06g048730.3.1
Transcript Infomation

Uroporphyrinogen decarboxylase (AHRD V3.3 *** K4C5B9_SOLLC)
Sequence

CTTTAAAGTAAAAACTAGTTTACTCATAAAAATAAGAAACAGAGGAATAAGTGTGGGTAG
TAACTAGTAAGTATGTGGAGCCATGGAATGAGAAAAAGGAAGAGACTTCATTTTCCTGTC
ATCTTATCTCTACAAAGTTATCTCCTTTGTCAACTACTTCCAAAATTTCCTTTTTATCTT
ATCCTTTCGCCCGAAACCCACTTTCAAATGCAAAGCAATTTCATCTAAATCCCATTGCAA
ATCATGTCTTGTATTTACAGTTCAGTCTCTTCTTTCTCAATTTCATCTAAATCGTCTTCT
TCTTCTCGCTCTAAATTCAAGCCCAGAATCTCTTGTTCCGTTGGAGGAACTGTTGCTGAA
CCAAAAACTATAAATGCAACAGAGCCTTTGTTGCTTGATGCTGTTCGGGGTAAAGAAGTA
GAAAGGCCTCCTGTTTGGCTTATGAGACAAGCAGGGAGGTACATGAAGAGTTATCAAATC
TTATGTGAGAAGCACCCATCCTTTCGTGAGAGATCAGAAAATGTAGATCTTGTGGTAGAA
ATTTCTCTGCAGCCATGGAAAGTATTCCAGCCTGATGGGGTCATTTTGTTTTCAGATATT
CTTACTCCTCTCTCTGGTATGAACATCCCTTTTGACATTATAAAGGGGAAGGGTCCTGTC
ATATTTGATCCACCGACCACACTTTCTGATGTTGAGAAAGTTAGAGAATTTATTCCTGAA
GAATCAGTTCCATATGTTGGAGAAGCATTAACAATTTTGCGGAAAGAGGTAAATAATCAA
GCAGCAGTTCTGGGTTTCGTTGGGGCACCATTTACGTTGGCTTCATATGTGGTTGAAGGT
GGTTCCTCTAAGAACTTTACAAAAATTAAGAGATTAGCTTTTGCGGAGCCCAAGGTCCTT
CATTCGCTGCTTCAAATATTTGCAACCTCAATGGCTAAATATATCCGTTATCAAGCTGAC
CATGGAGCTCAAGCAGTTCAGATCTTTGATTCATGGGCCACAGAGCTAAGCCCAGTCGAT
TTTGAGGAGTTCAGTCTACCATACTTAAAACAGATAGTTGAGGCAGTGAAACTAACCCAT
CCTGATCTCCCTCTGATTCTTTATGCAAGTGGATCAGGTGGCTTGCTTGAGAGACTACCC
TTGACAGGAGTAGATGTAGTCAGTTTGGACTGGACAGTTGATATGGCTGATGGTAGGAGA
CGACTGGGTCCTAATGTGGCTATACAAGGTAATGTGGATCCTGGAGTTCTCTTTGGCTCC
AAGGAATTTATTACCAACCGGATAAATGATACAGTGAAGAAAGCTGGTAAAGGGAAACAT
ATTTTGAACCTTGGACATGGCATCAAAGTAGGTACACCTGAGGAAAATGTTGCTCACTTC
TTTGAGGTTGCTAAAGGTCTTAGGTATTAGAAGCAGATCAAATCATTATCAATTACAACC
TGTTCCATATCTCCGACAAGGTCTTATCATTCTTCTCCTCATTTTTTCTCTTGTATCTAG
TGGTTCCTGTGAGTGAACAGGGAAACAAATATTTTCAGAGCATTTTTGTTAGAATGTGCT
TTAAGATCTAATTTGAGACTGAAGTTGAAGCTAGGCTTTCTCATTGTGTATCTGAGTGTA
GATTTTTGACTGATAGTAGTCTAGTTCGACTCTGATAAACTTTGAAAGTTGAACTCACTG
AACTTTTCGTTTGTTGGTTGCTGCTGTGTTCTCTCTTTTTCTTCTCCCCGTCTCTGTGGT
TTGCTTGCTCCCAGTTGTATGCACGAGTCATGGCATGAAAAAGGTATTGGTGTATTGTTC
ATTGTATTTTTGATGAAGTAGGTAGTTGTCAGGTGTTTATAGTGGGCTAAACTATAGTAG
TAAAGTTGGTAAGTTTTGCTGTTTTGTGGGCGTAGATGCAAGATGGTACATACAAGAGTG
TATAACGAGGTATGAGAATTATACAGAAAATGGTCCCCTTTTTAGGCAGCTTCTACCATC
AGTATCCCATGGCTGCAACAGTATACATCATCTAAGTTAGCAAACACTTCAACTTGTTAT
GTTAGTGTATTGGGGAATATTGTCAAGTACATGTGGTGCTCAGAACAAAGGAACTCCTGA
CATTAGAGTGAAACCTGAGAAACAGTTGGTATAGAAGCATCAGGGAGAACTTCATCGGTT
AAGTACCTTGTTTGTTTGCTTTTGTCTTGTTGTCGGGTTAACTAGATGGTTTCTGTTGGA
GAGGAATGCAGGAACTCGTGCTCTCAAGTTATGAAATAAGAAGAAAAGGACTTGTATCTC
AACGACGCAACTCCTCAGCTAGAGTTGGCATAATGCATGT