Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g043150.3.1
CDS Infomation

cell cycle switch 52B
Sequence

ATGGAGCCGATAACTCAAAGAAGAAAGAGTGGAATTAACCTTCCATCTACAATGTCGGAA
ACCTCTCTTCGTCTTGATGCTTTTTCTTCTCCTCCCAGATCAAAGCGAACAACCAATTTG
GCTTCATCGCCGATGTCAAACAGGTCACCTCGGACAATATCGAATCTGTCATCATCTCCG
TCTTCTAAATCTGCAAGTTGCAGTGATAGATTCATTCCTTGTAGATCTTCTTCAAGGCTG
CATACTTTTGGTCTGGTGGAGAAGGCGTCTCCGGTGAAAGAAGGAGGAGGAGGAAACAAT
GATGCATATTCCAGGTTGTTGAAATCTGAGCTTTTTGGAGCTGATTTTAGTTGTTTCTCT
TCTCCTGCAGGTACTAAGGGATGTGCTAATTCACCCATGAGTCCCAGTAAGAATATGCTC
AGATTTAAAACTGAAAATTCTGGCCCTAATTCCCCTTCCGTTTTGGGGCATACAGATACT
TCCCTCTCAAACGAAGTTTCTACCCCTCCTAAACCCCCTAGGAAAGTGCCTAAAACACCC
CACAAGGTTTTGGATGCACCATCACTTCAAGATGATTTCTATTTGAACCTAGTTGATTGG
TCCTCGCAGAATATACTTGCTGTTGGGCTTGGAACTTGTGTTTATTTATGGACAGCTTCA
AATAGTAGAGTGACAAAGTTGTGCGACTTAGGACCGACTGATAGTGTCTGCTCTGTCCAA
TGGACTAGGGAGGGGTCTTATATATCAATCGGTACAAGTCTTGGGCAAGTTCAGGTTTGG
GATGGAACTCAATGCAAGAAGGTTAGAACATTTGGTGGACATCAAACAAGAACTGGAGTC
CTTGCCTGGAGTTCGCGCATCCTATCTTCTGGTAGTAGAGACAGAAACATCCTTCAGCAT
GACGTTCGTGTTCCAAGTGACTTTGTTAGCAAATTTATCGGTCACAAGTCCGAGGTATGT
GGATTGAAATGGTCTCATGATGATCGAGAACTTGCGTCAGGGGGAAATGACAATCAGCTG
TTAGTGTGGAATCAGCGATCTCAGCAATCTGTTTTGAAGCTAACGGAGCATACTGCCGCT
GTTAAGGCCATTACCTGGTCTCCTCATCAATGTGGCCTTCTGGCATCAGGAGGAGGAACA
GCTGATCGATGTATTCGTTTTTGGAACACAATAAATGGCAATCAGTTGAACCATATTGAT
ACAGGAAGCCAGGTATGCAATCTAGCGTGGAGTAAAAATGTAAATGAGATAGTTAGTACA
CATGGTTATTCCCAAAACCAAATCATGGTGTGGAAGTATCCATCAATGTCAAAGGTTGCT
ACTCTAACTGGCCATAGTCTGCGTGTCCTATATCTTGCCATGTCACCTGATGGCCAGACA
ATAGTAACTGGAGCAGGAGATGAGACTCTCCGCTTTTGGAATGTATTTCCGTCAGTAAAA
ATTCCTGCAGCAGTGAAGGACACAGGAGTATGGTCTTTAGGCAGGACGCACATACGTTGA

Peptide Sequence

PEP ID

Solyc06g043150.3.1
PEP Infomation

cell cycle switch 52B
Sequence

MEPITQRRKSGINLPSTMSETSLRLDAFSSPPRSKRTTNLASSPMSNRSPRTISNLSSSP
SSKSASCSDRFIPCRSSSRLHTFGLVEKASPVKEGGGGNNDAYSRLLKSELFGADFSCFS
SPAGTKGCANSPMSPSKNMLRFKTENSGPNSPSVLGHTDTSLSNEVSTPPKPPRKVPKTP
HKVLDAPSLQDDFYLNLVDWSSQNILAVGLGTCVYLWTASNSRVTKLCDLGPTDSVCSVQ
WTREGSYISIGTSLGQVQVWDGTQCKKVRTFGGHQTRTGVLAWSSRILSSGSRDRNILQH
DVRVPSDFVSKFIGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQSVLKLTEHTAA
VKAITWSPHQCGLLASGGGTADRCIRFWNTINGNQLNHIDTGSQVCNLAWSKNVNEIVST
HGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSVK
IPAAVKDTGVWSLGRTHIR*

Transcript Sequence

Transcript ID

Solyc06g043150.3.1
Transcript Infomation

cell cycle switch 52B
Sequence

AAGTATGTTTTTGTCATTTCAATTGTTTTTTTATATTCTGTCAAAAAGTATAATCAACCA
CATCTAATTTTATTAAAGAAATATCTAAATATTAAAGCTACTAATTAAGGTAGAAATAGT
TTGAGGGGTGAGAGAAAGAGTGAAGCAACAACGGCTAGTGAGAGAAAACATAAAATAAAG
GGAAGCAGAAAGTAACCGTTAGGACTTAAAAAGAGCGCCTCATAATATTTCATCAAATCC
TCCTTCCTTCCTTTCTCACTAAATAAACTATCCGTTACTCTTTGCATCAAGAACATAGAG
GTTTTTTTTTGTCTATACAGAATTGAGCTTCTGCCATTGATTTGAGCTCAACAAAATTAA
AAAAAAACATGGAGCCGATAACTCAAAGAAGAAAGAGTGGAATTAACCTTCCATCTACAA
TGTCGGAAACCTCTCTTCGTCTTGATGCTTTTTCTTCTCCTCCCAGATCAAAGCGAACAA
CCAATTTGGCTTCATCGCCGATGTCAAACAGGTCACCTCGGACAATATCGAATCTGTCAT
CATCTCCGTCTTCTAAATCTGCAAGTTGCAGTGATAGATTCATTCCTTGTAGATCTTCTT
CAAGGCTGCATACTTTTGGTCTGGTGGAGAAGGCGTCTCCGGTGAAAGAAGGAGGAGGAG
GAAACAATGATGCATATTCCAGGTTGTTGAAATCTGAGCTTTTTGGAGCTGATTTTAGTT
GTTTCTCTTCTCCTGCAGGTACTAAGGGATGTGCTAATTCACCCATGAGTCCCAGTAAGA
ATATGCTCAGATTTAAAACTGAAAATTCTGGCCCTAATTCCCCTTCCGTTTTGGGGCATA
CAGATACTTCCCTCTCAAACGAAGTTTCTACCCCTCCTAAACCCCCTAGGAAAGTGCCTA
AAACACCCCACAAGGTTTTGGATGCACCATCACTTCAAGATGATTTCTATTTGAACCTAG
TTGATTGGTCCTCGCAGAATATACTTGCTGTTGGGCTTGGAACTTGTGTTTATTTATGGA
CAGCTTCAAATAGTAGAGTGACAAAGTTGTGCGACTTAGGACCGACTGATAGTGTCTGCT
CTGTCCAATGGACTAGGGAGGGGTCTTATATATCAATCGGTACAAGTCTTGGGCAAGTTC
AGGTTTGGGATGGAACTCAATGCAAGAAGGTTAGAACATTTGGTGGACATCAAACAAGAA
CTGGAGTCCTTGCCTGGAGTTCGCGCATCCTATCTTCTGGTAGTAGAGACAGAAACATCC
TTCAGCATGACGTTCGTGTTCCAAGTGACTTTGTTAGCAAATTTATCGGTCACAAGTCCG
AGGTATGTGGATTGAAATGGTCTCATGATGATCGAGAACTTGCGTCAGGGGGAAATGACA
ATCAGCTGTTAGTGTGGAATCAGCGATCTCAGCAATCTGTTTTGAAGCTAACGGAGCATA
CTGCCGCTGTTAAGGCCATTACCTGGTCTCCTCATCAATGTGGCCTTCTGGCATCAGGAG
GAGGAACAGCTGATCGATGTATTCGTTTTTGGAACACAATAAATGGCAATCAGTTGAACC
ATATTGATACAGGAAGCCAGGTATGCAATCTAGCGTGGAGTAAAAATGTAAATGAGATAG
TTAGTACACATGGTTATTCCCAAAACCAAATCATGGTGTGGAAGTATCCATCAATGTCAA
AGGTTGCTACTCTAACTGGCCATAGTCTGCGTGTCCTATATCTTGCCATGTCACCTGATG
GCCAGACAATAGTAACTGGAGCAGGAGATGAGACTCTCCGCTTTTGGAATGTATTTCCGT
CAGTAAAAATTCCTGCAGCAGTGAAGGACACAGGAGTATGGTCTTTAGGCAGGACGCACA
TACGTTGATGTAATAATTATTGTTGCTGTAAATGGAAATTGAAATCAAGGAAGACACAGG
ACATACAAATAT