Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g010000.3.1
CDS Infomation	SUMO E3 ligase SIZ1 (AHRD V3.3 *** A0A0X9AQ43_SOLLC)
Sequence	ATGCTTAGCTGCAAGGATAAATTGGCACATTTTCGAATAAAGGAGCTCAAAGATGTGCTT ACTCAACTTGGTCTCTCAAAGCAAGGAAAGAAGCAGGATCTTGTTGATCGCATATTAGCT ATTCTTTCAAATGAACGAGATTCAGGAATGTGTGCACAGAAAAATAGTGTTGGAAAGGAA GAGGTTGCCAAACTTGTTGATGGAATTTACAGAAAAATGCAAGTGAATGGGGCAACTGAC CTAGCATCTAAGTCGCAAATTGTCTCGGACAGCAGTAATGTAAAGTTAAAAGAGGAAATT GAAGAAGATACTTACCAGATGGAGATTCGATGTCTCTGTGGAAGCTCGCAACAAGCTGAT AAGATAATTCAGTGTGAAAATATAAGATGCCGTGCATGGCGACATGTGAGCTGTGTCATC ATTCCGGAAAAACGCAGGGAAGCGGGTTCTCCTCTAGCTTTACCTGAAAAATTTTACTGT GAATTTTGCAGATTGAGTCGCGCAGATCCGTTCTGGGTGACGGTGTCAATGCCTTTATTT CCTACTAAGTGGGCTGTCACTAGTGCACCTTTAGATAGCACAAACCAAATGCAAAGGATT GAAAAATTATTTTCCCTCAGTAGAGACGACATGGAGTTATTGACGAAGCAGGAATACGAT GTTCAGGCTTGGTGCATGCTTCTCAATGACAAGGTAGAATTTAGGATGCAGTGGCCTCAG TATGCTGATTTGCAGGTCAATGGAGTTCCAGTACGTTGCATAAATAGACCTGACTCACAA TTATTAGGTGCAAATGGTCGAGATGATGGTCCAATAATCACACTATTCTCCCGAGATGGA ATGAACAAAATTTTGTTAACAGGATGTGATGCTCGCATCTTTTGCTTTGGAGTTAGACTT GTACGGCGTCGTACTCTCGTACAGGTTCTCAATATTATCCCTAAAGAGCCAGATGGTGAG GCATTTGATGATGCTCTTGCTCGCATTCGTCGTTGCATTGGTGGGGGAACTGCCACTGAA AATGCTGACAGCGACAGTGACCTCGAAGTGGTTGCGGATTTTATTACAGTCAATCTTCGA TGCCCTATGAGTGGTTCAAGAATGAAAGTTGCTGGAAGGTTCAAACCTTGTGTACATATG GGCTGCTTTGATCTTGACATCTTTGTTGAAATGAATCAAAGGTCGAGGAAGTGGCAATGC CCAATCTGTCTCAAGAATTACTCTCTGGAGCATATCATTATAGATCCGTATTTCAATCGA ATCACTTCTCAGCTGCAAACTTGTGGAGAAGAAGTGTCGGAAATTGAAGTGAAACCTGAT GGTTCTTGGCGTGCAAAGGCAGAAGGTGATCGAAGGAGTATTGGTGATCTCGGACGGTGG CACTTACCTGATGGTACTCTTCTTGAATCTCAAGATATAGAGTCAAAGCCCAGGACTGGA ATTCTTAAGCATGTTATACAGGAAGGAGGCTCTGAAAGCTGTGGACTTAAAGTTGGGTTG AAGAAGAATAGAAATGGTTTGTGGAAAATTAACAAACCTGAAGCTATGCAGACATATCCA CAAAGAGATGGAGTAAGAGAGAACGTAGAAAATCATATTCAAAATATCCTTCCCATGAGC AGCAGTGCCACTGTGAGTGGCAAGGAAGGTGAAGATCCCAGTGTTAATCAGGATGGTCTC ATTAACTTTGATTTCCCTACCAATGGGTTTGAACTTGAAACCGTTTCTCCAAATTTTGCC CCAGCACATGGTTGTAATGACCGGAACCCCCCAGGACCAGCTAGAGGTGCTGAAGTTATT GTCCTTAGTGATTCTGACGAAGAAGATGAACCATTCATCTCTTCTGCATCCATTTACAAT AACAGCCATACCAATGCACCTGTAGTCTCTTTTGCGGGTAGGCCTAAAGGAATTTCAGCT TCTTGCCATGACAACCGGACACTTTTTAATGATGGGAATCCATGCCGGGGAATTGCAAAG AATAACGAAATTATGACGAATGTGTGGTCTTTGCCTACTGTTAACCAGTGTGCCCCAAGC TTTCAGTTATTTGGTACAGCTATGCATCAGGGTTCTATCAACCGTACAAGCTCTACCAAT GGCTACTCGTTGCCTGCAGACACTGGCATTGGATCTTGTACTCTTCTTCCTGAATCTTCC GTTGATCGTATGAATGCTGCAATGTGTGATGGTTCAAATAACAATACCGTATTATGTGAC GGTATTCAAGGATCACTTCATATATTTCTTCCTCTACCATCGAATGCATCAGTTGAGGCT GATGTGCGTCAGCCAGGTGTGTCAACTGGTGTTCACACTGAGGATTGGGTTTCACTTAGG CTCGGCGCAGGTGGGGGTTCTGCAGTTGCAAATGGGTTGAGCTCAGGGAAGCCGCTGCAA ACCAAAGACTCTTCCTTGAACGCATTTACTGACACTGCTTCATTGGTTGTTGGTGCGAAT GAGGGAGTATCATTGACGAGCAGGAGAAGATCAGATGGTCCATTTAATTTTCCTCGCCAA CGCCGTTCTGTTAGACGGAGATGTCTAAATATTGATTCAGACACTGAATAG

Peptide Sequence

PEP ID	Solyc06g010000.3.1
PEP Infomation	SUMO E3 ligase SIZ1 (AHRD V3.3 *** A0A0X9AQ43_SOLLC)
Sequence	MLSCKDKLAHFRIKELKDVLTQLGLSKQGKKQDLVDRILAILSNERDSGMCAQKNSVGKE EVAKLVDGIYRKMQVNGATDLASKSQIVSDSSNVKLKEEIEEDTYQMEIRCLCGSSQQAD KIIQCENIRCRAWRHVSCVIIPEKRREAGSPLALPEKFYCEFCRLSRADPFWVTVSMPLF PTKWAVTSAPLDSTNQMQRIEKLFSLSRDDMELLTKQEYDVQAWCMLLNDKVEFRMQWPQ YADLQVNGVPVRCINRPDSQLLGANGRDDGPIITLFSRDGMNKILLTGCDARIFCFGVRL VRRRTLVQVLNIIPKEPDGEAFDDALARIRRCIGGGTATENADSDSDLEVVADFITVNLR CPMSGSRMKVAGRFKPCVHMGCFDLDIFVEMNQRSRKWQCPICLKNYSLEHIIIDPYFNR ITSQLQTCGEEVSEIEVKPDGSWRAKAEGDRRSIGDLGRWHLPDGTLLESQDIESKPRTG ILKHVIQEGGSESCGLKVGLKKNRNGLWKINKPEAMQTYPQRDGVRENVENHIQNILPMS SSATVSGKEGEDPSVNQDGLINFDFPTNGFELETVSPNFAPAHGCNDRNPPGPARGAEVI VLSDSDEEDEPFISSASIYNNSHTNAPVVSFAGRPKGISASCHDNRTLFNDGNPCRGIAK NNEIMTNVWSLPTVNQCAPSFQLFGTAMHQGSINRTSSTNGYSLPADTGIGSCTLLPESS VDRMNAAMCDGSNNNTVLCDGIQGSLHIFLPLPSNASVEADVRQPGVSTGVHTEDWVSLR LGAGGGSAVANGLSSGKPLQTKDSSLNAFTDTASLVVGANEGVSLTSRRRSDGPFNFPRQ RRSVRRRCLNIDSDTE*

Transcript Sequence

Transcript ID	Solyc06g010000.3.1
Transcript Infomation	SUMO E3 ligase SIZ1 (AHRD V3.3 *** A0A0X9AQ43_SOLLC)
Sequence	GTTAGGCCGATGCTAGCATGAGACATCTGTAATCCGAAATAAGTGAGAGGATCCAAACCC GGATTTGCTTGCATGAAATAAACCGTATTTGATGAGAAGGATACGTCCGTAATATTTGGT AGTAATCTGATTATAGGTTATATGAATTAAAGTCCAAAAGGTCGGTTATTCTCAAATATA TATGCCAAAAGGAAGAGCTCAATCGCCGTGAAGCAGCAGCTATTTGCTGATAAACCCTAG GTGATTCCAGGTTCATCCTGAAGGCCACAAGTCCACAACATTCTGTAGTGGAGTATCATC AGGGGTGTGAAAATGCTTAGCTGCAAGGATAAATTGGCACATTTTCGAATAAAGGAGCTC AAAGATGTGCTTACTCAACTTGGTCTCTCAAAGCAAGGAAAGAAGCAGGATCTTGTTGAT CGCATATTAGCTATTCTTTCAAATGAACGAGATTCAGGAATGTGTGCACAGAAAAATAGT GTTGGAAAGGAAGAGGTTGCCAAACTTGTTGATGGAATTTACAGAAAAATGCAAGTGAAT GGGGCAACTGACCTAGCATCTAAGTCGCAAATTGTCTCGGACAGCAGTAATGTAAAGTTA AAAGAGGAAATTGAAGAAGATACTTACCAGATGGAGATTCGATGTCTCTGTGGAAGCTCG CAACAAGCTGATAAGATAATTCAGTGTGAAAATATAAGATGCCGTGCATGGCGACATGTG AGCTGTGTCATCATTCCGGAAAAACGCAGGGAAGCGGGTTCTCCTCTAGCTTTACCTGAA AAATTTTACTGTGAATTTTGCAGATTGAGTCGCGCAGATCCGTTCTGGGTGACGGTGTCA ATGCCTTTATTTCCTACTAAGTGGGCTGTCACTAGTGCACCTTTAGATAGCACAAACCAA ATGCAAAGGATTGAAAAATTATTTTCCCTCAGTAGAGACGACATGGAGTTATTGACGAAG CAGGAATACGATGTTCAGGCTTGGTGCATGCTTCTCAATGACAAGGTAGAATTTAGGATG CAGTGGCCTCAGTATGCTGATTTGCAGGTCAATGGAGTTCCAGTACGTTGCATAAATAGA CCTGACTCACAATTATTAGGTGCAAATGGTCGAGATGATGGTCCAATAATCACACTATTC TCCCGAGATGGAATGAACAAAATTTTGTTAACAGGATGTGATGCTCGCATCTTTTGCTTT GGAGTTAGACTTGTACGGCGTCGTACTCTCGTACAGGTTCTCAATATTATCCCTAAAGAG CCAGATGGTGAGGCATTTGATGATGCTCTTGCTCGCATTCGTCGTTGCATTGGTGGGGGA ACTGCCACTGAAAATGCTGACAGCGACAGTGACCTCGAAGTGGTTGCGGATTTTATTACA GTCAATCTTCGATGCCCTATGAGTGGTTCAAGAATGAAAGTTGCTGGAAGGTTCAAACCT TGTGTACATATGGGCTGCTTTGATCTTGACATCTTTGTTGAAATGAATCAAAGGTCGAGG AAGTGGCAATGCCCAATCTGTCTCAAGAATTACTCTCTGGAGCATATCATTATAGATCCG TATTTCAATCGAATCACTTCTCAGCTGCAAACTTGTGGAGAAGAAGTGTCGGAAATTGAA GTGAAACCTGATGGTTCTTGGCGTGCAAAGGCAGAAGGTGATCGAAGGAGTATTGGTGAT CTCGGACGGTGGCACTTACCTGATGGTACTCTTCTTGAATCTCAAGATATAGAGTCAAAG CCCAGGACTGGAATTCTTAAGCATGTTATACAGGAAGGAGGCTCTGAAAGCTGTGGACTT AAAGTTGGGTTGAAGAAGAATAGAAATGGTTTGTGGAAAATTAACAAACCTGAAGCTATG CAGACATATCCACAAAGAGATGGAGTAAGAGAGAACGTAGAAAATCATATTCAAAATATC CTTCCCATGAGCAGCAGTGCCACTGTGAGTGGCAAGGAAGGTGAAGATCCCAGTGTTAAT CAGGATGGTCTCATTAACTTTGATTTCCCTACCAATGGGTTTGAACTTGAAACCGTTTCT CCAAATTTTGCCCCAGCACATGGTTGTAATGACCGGAACCCCCCAGGACCAGCTAGAGGT GCTGAAGTTATTGTCCTTAGTGATTCTGACGAAGAAGATGAACCATTCATCTCTTCTGCA TCCATTTACAATAACAGCCATACCAATGCACCTGTAGTCTCTTTTGCGGGTAGGCCTAAA GGAATTTCAGCTTCTTGCCATGACAACCGGACACTTTTTAATGATGGGAATCCATGCCGG GGAATTGCAAAGAATAACGAAATTATGACGAATGTGTGGTCTTTGCCTACTGTTAACCAG TGTGCCCCAAGCTTTCAGTTATTTGGTACAGCTATGCATCAGGGTTCTATCAACCGTACA AGCTCTACCAATGGCTACTCGTTGCCTGCAGACACTGGCATTGGATCTTGTACTCTTCTT CCTGAATCTTCCGTTGATCGTATGAATGCTGCAATGTGTGATGGTTCAAATAACAATACC GTATTATGTGACGGTATTCAAGGATCACTTCATATATTTCTTCCTCTACCATCGAATGCA TCAGTTGAGGCTGATGTGCGTCAGCCAGGTGTGTCAACTGGTGTTCACACTGAGGATTGG GTTTCACTTAGGCTCGGCGCAGGTGGGGGTTCTGCAGTTGCAAATGGGTTGAGCTCAGGG AAGCCGCTGCAAACCAAAGACTCTTCCTTGAACGCATTTACTGACACTGCTTCATTGGTT GTTGGTGCGAATGAGGGAGTATCATTGACGAGCAGGAGAAGATCAGATGGTCCATTTAAT TTTCCTCGCCAACGCCGTTCTGTTAGACGGAGATGTCTAAATATTGATTCAGACACTGAA TAGGGAGCCAATTGCAGATATGAGGAAAGATGATACTTGTACTGGAAAAATGAGGATGAT CCCTTGTTTGTAAGATCTTGTCTGAATCGATCTCTTTTGTCTTGGAGATGAACATGCATC TACCAACAAAGAAACTACCTACCTTCAACTCATGTGCTGGAAGTTTAGGAGTTGTGAGTG GTGCGCTCTCAACTCTCCACTCTCCAGCTTTTGTATTCTATTATCTGGACTCGGAATCCC CCGCTCCCATATCCACCTTGGTATTATGGCCATATAATTGTTTTCATTTTGTGAATGATG CAAGTGAATTGTACATTTGGATAGCTTGAATAGGACAAGCTGATAGGTTGGTTATCTAGG TTTAAAAAATAGTAGCAACACCAGTTGGTTATTACTGCTGGATGTAAAGTAGCAAAGAAA TAGAAGCCTATAGCCTGTAAATCTTTACTATAAGTAATTTATAGACTACAGATAGCATTT TGGAATTTGTGTTTCTCCTGTTGAGTTCTCCTATTGTTAATCATTGAGATTATGGTTAAA TCTCAACCACCTTGGGAGAGTTGTAGACTCTTAACTATCATACTAGATCATTTTTTGAGT TTTCATCATGGTGGTCAACTCTTTTATCTCCATAAATCACAACTATTCAACTGAGTCCTG GGGAATTTCCAAAAATATTAAAATGAAGCCACATTCCAGCTTACATGGATGGACTAGTGA CAACCATCCCTCAAGTCATAAAACATGTATTATGATGCCATTTAAGGGGGGAAAAGTCCT ATTACTTAAATCATTAGGCGGATCGTTAGACTTGTCGACGTTCTTCACCTATAAGTTTTA ACTAGATCAAGCTTCAAATCTTTGCACCTTAAGAAGAAAAATTTTGCACAAATTTTGTTC GTCATCTCCTTTAGCAGTTCCTCATATAAAATTATTGATGGAAACAACATCAAAGCATTG ACGACCTGGGGTTTAAAATAAATATGTATGTTCAAACACTTAAATCATCTTTAATTTTTT AAAAAGACACAAGATTTTGAATC