Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g009800.2.1
CDS Infomation	Pentatricopeptide repeat-containing protein family (AHRD V3.3 - A0A151SLA5_CAJCA)
Sequence	ATGAACAGGGCAGAAAAGCTGTGTCTTTCTTTGTTAAGCTACTGCAAAACACTTGGAAAC CTCAACCAAATCCACGCCTTCGTTTACAAATCCGGCCTTGAGACCAACCCACTAATCGCC GGAAAACTCCTAATACTTGGTGCCCTGCAAATTTCTGATGCTATTGATTACGCTCGCCGT TTGCTCATACACTATCCAAACTCAGATGTGTTCATGTACAACACCCTCATCCGAGGTGAA TCCGAGTCAGACTCACCCAAGAATTCAGTCAGCACATTCATTTACATGCTGCGACAATCA TATTCTCCTCCTGATAGTTTCTCCTTTGCTTTTGTACTCAAAGCAGCAGCTAATTTACGG TGTTTAACAACTGGGTTTCAGCTGCATTGTCAAGCTATGACTCGTGGGCTTGACACCCAT CTCTTTGTTGGGACTACAATTATTAGTATGTATGCGGAATGTGGGTTTGTTGAGTTTGCT TGGAAGGTGTTTGTTCAAATACCTCAACCAAATGTTGTGGCGTGGAATGCAATACTTACA GCGTATCTTCGAGGGAGTGATGTAAGTGGTGCAGATAAAGTGTTTGGTTTAATGCCGTTT AGGAATTTGACTACTTGGAATGTGATGCTGGCAGGGTATACTAAAGCAGGGGAGCTTGAA CGTGCAGAGAGGTTGTTCTTGCAGATGCCAAGTAGAGATGATATTTCTTGGAGTACTATG ATTGTTGGATTTTCTCATAATGGTTGCTTTGATGAGGCGATTCGGGTATTCAGGGAATTG GTTGGGAGTGAAAGTAAACCCAATGAAGTGAGCTTGACGGGTGCTTTATCTGCGTGTGCT CAAGCTGGGGCGTTTAAGTTTGGGATGGTATTACATGCATATATAGAGAAAGTGGGGTTG GTTTGGATAACTTCTGTGAACAATGCACTCTTGGATACCTACTCCAAGTGTGGAAATGTG TTGATGGCTCGTCTTGTCTTTGAGAGAATGCTTGGGAAGAAAACCATCGTTTCTTGGACT TCTATGATCGCAGGGTTTGCAACGCAAGGATATGGTGAAGAGGTGATAAAATATTTTCAT GAGATGGAAGAATCTGGGACCAGACCTGATGGGGTCACTTTTATTTCAGTACTTTATGCA TGTAGTCATGCTGGTTTAGTTGAACAAGGTCATGAGCTATTCAGTAAAATGACAGAAATT TATGACATTGAACCAACTATTGAGCATTATGGTTGTATGGTTGATTTGTATGGTAGGGCT GGTCAGCTTCATAAGGCATATGATTTTGTGGTTCAAATGCCAGTTCCACCCAATGCAGTT ATCTGGCGAACACTTCTTGGGGCTTGCAGTTTTTTTGGTGACATTGAAATGGCTGAGCAA GTCAAGGAAAGACTCTCTGAGCTGGATCCAGACAATTCTGGTGACCATGTTTTGCTGTCC AACATTTATGCATTTGTAGGGAAATGGAAGGATGTTGCCATGGAGAGGAGATCAATGACT GAGAAAAAATTGAAGAAAATACCAGGTTGCTACAAACTGGATTCATCATCCGCTAAGAAC TTGGAATCAGTAAGACCTTTGGGCTTCTTTTCTGAAACTAGATGTTTCCGTTCGCGTAGT TACTTTAAAGTTGCAAACTTTCTTATCATGAGGCTTGGAGTTTTACAAAACTTGATATTA AAGAAAGTGCATGGAGGATCGGTGCTTAGAGATCATAGAATAAATGAAATCTCATGTAAA TTGTTAGGGAGGACCAATACTGATAGAAATCACCTATTGTCATTCACTGCACCAGCAGCT CTAGGAAACAACAAACGCAAGCTGTACCAGATCATGATGGAGGAAGACTGA

Peptide Sequence

PEP ID	Solyc06g009800.2.1
PEP Infomation	Pentatricopeptide repeat-containing protein family (AHRD V3.3 - A0A151SLA5_CAJCA)
Sequence	MNRAEKLCLSLLSYCKTLGNLNQIHAFVYKSGLETNPLIAGKLLILGALQISDAIDYARR LLIHYPNSDVFMYNTLIRGESESDSPKNSVSTFIYMLRQSYSPPDSFSFAFVLKAAANLR CLTTGFQLHCQAMTRGLDTHLFVGTTIISMYAECGFVEFAWKVFVQIPQPNVVAWNAILT AYLRGSDVSGADKVFGLMPFRNLTTWNVMLAGYTKAGELERAERLFLQMPSRDDISWSTM IVGFSHNGCFDEAIRVFRELVGSESKPNEVSLTGALSACAQAGAFKFGMVLHAYIEKVGL VWITSVNNALLDTYSKCGNVLMARLVFERMLGKKTIVSWTSMIAGFATQGYGEEVIKYFH EMEESGTRPDGVTFISVLYACSHAGLVEQGHELFSKMTEIYDIEPTIEHYGCMVDLYGRA GQLHKAYDFVVQMPVPPNAVIWRTLLGACSFFGDIEMAEQVKERLSELDPDNSGDHVLLS NIYAFVGKWKDVAMERRSMTEKKLKKIPGCYKLDSSSAKNLESVRPLGFFSETRCFRSRS YFKVANFLIMRLGVLQNLILKKVHGGSVLRDHRINEISCKLLGRTNTDRNHLLSFTAPAA LGNNKRKLYQIMMEED*

Transcript Sequence

Transcript ID	Solyc06g009800.2.1
Transcript Infomation	Pentatricopeptide repeat-containing protein family (AHRD V3.3 - A0A151SLA5_CAJCA)
Sequence	ATGAACAGGGCAGAAAAGCTGTGTCTTTCTTTGTTAAGCTACTGCAAAACACTTGGAAAC CTCAACCAAATCCACGCCTTCGTTTACAAATCCGGCCTTGAGACCAACCCACTAATCGCC GGAAAACTCCTAATACTTGGTGCCCTGCAAATTTCTGATGCTATTGATTACGCTCGCCGT TTGCTCATACACTATCCAAACTCAGATGTGTTCATGTACAACACCCTCATCCGAGGTGAA TCCGAGTCAGACTCACCCAAGAATTCAGTCAGCACATTCATTTACATGCTGCGACAATCA TATTCTCCTCCTGATAGTTTCTCCTTTGCTTTTGTACTCAAAGCAGCAGCTAATTTACGG TGTTTAACAACTGGGTTTCAGCTGCATTGTCAAGCTATGACTCGTGGGCTTGACACCCAT CTCTTTGTTGGGACTACAATTATTAGTATGTATGCGGAATGTGGGTTTGTTGAGTTTGCT TGGAAGGTGTTTGTTCAAATACCTCAACCAAATGTTGTGGCGTGGAATGCAATACTTACA GCGTATCTTCGAGGGAGTGATGTAAGTGGTGCAGATAAAGTGTTTGGTTTAATGCCGTTT AGGAATTTGACTACTTGGAATGTGATGCTGGCAGGGTATACTAAAGCAGGGGAGCTTGAA CGTGCAGAGAGGTTGTTCTTGCAGATGCCAAGTAGAGATGATATTTCTTGGAGTACTATG ATTGTTGGATTTTCTCATAATGGTTGCTTTGATGAGGCGATTCGGGTATTCAGGGAATTG GTTGGGAGTGAAAGTAAACCCAATGAAGTGAGCTTGACGGGTGCTTTATCTGCGTGTGCT CAAGCTGGGGCGTTTAAGTTTGGGATGGTATTACATGCATATATAGAGAAAGTGGGGTTG GTTTGGATAACTTCTGTGAACAATGCACTCTTGGATACCTACTCCAAGTGTGGAAATGTG TTGATGGCTCGTCTTGTCTTTGAGAGAATGCTTGGGAAGAAAACCATCGTTTCTTGGACT TCTATGATCGCAGGGTTTGCAACGCAAGGATATGGTGAAGAGGTGATAAAATATTTTCAT GAGATGGAAGAATCTGGGACCAGACCTGATGGGGTCACTTTTATTTCAGTACTTTATGCA TGTAGTCATGCTGGTTTAGTTGAACAAGGTCATGAGCTATTCAGTAAAATGACAGAAATT TATGACATTGAACCAACTATTGAGCATTATGGTTGTATGGTTGATTTGTATGGTAGGGCT GGTCAGCTTCATAAGGCATATGATTTTGTGGTTCAAATGCCAGTTCCACCCAATGCAGTT ATCTGGCGAACACTTCTTGGGGCTTGCAGTTTTTTTGGTGACATTGAAATGGCTGAGCAA GTCAAGGAAAGACTCTCTGAGCTGGATCCAGACAATTCTGGTGACCATGTTTTGCTGTCC AACATTTATGCATTTGTAGGGAAATGGAAGGATGTTGCCATGGAGAGGAGATCAATGACT GAGAAAAAATTGAAGAAAATACCAGGTTGCTACAAACTGGATTCATCATCCGCTAAGAAC TTGGAATCAGTAAGACCTTTGGGCTTCTTTTCTGAAACTAGATGTTTCCGTTCGCGTAGT TACTTTAAAGTTGCAAACTTTCTTATCATGAGGCTTGGAGTTTTACAAAACTTGATATTA AAGAAAGTGCATGGAGGATCGGTGCTTAGAGATCATAGAATAAATGAAATCTCATGTAAA TTGTTAGGGAGGACCAATACTGATAGAAATCACCTATTGTCATTCACTGCACCAGCAGCT CTAGGAAACAACAAACGCAAGCTGTACCAGATCATGATGGAGGAAGACTGAAAAGGTATT CTCTTCACAACTTATTTTTACTTGATTCATACTACCACCGATGCAAATACACATTCTGTC GTTTATGTTGTTTTAATACCCTAAAAAATATCGCTTGTTAATTAGAATCCTAATCTAACT CTAATTAACCAAACTACATTCATTTGTCATTCTATTTCTCCAACTTTTTGTCTCTACATA ATGTCATACATCTTCAATGTGAAGAACAAATTTTCACTCAACAAACTCATTATGGTATGA TTATTAAACAAAAATGAATGACCAGTTATAATTTATAAACCGAAGATAAAACAGTTGGTA TATAGCTACAAAGACAAAGTTGGTTGCTTGACTTTTTCTATCAAATATTGATTGATTTAC ATGGTTAGACAGTAAAATTGTACTTACTGATAATCAATGATGATGGAATCTTGAATTCTG CTTCCATTTGAAGCTTATGATGGAGGGCTACGAGGGCAAAAACATCTTGCAGTAAGTAAG GAGTTGTTAATAAGTTAGAACAGCTACGGAAAATGGTAATATGTGTGGCAAGTATATTAT AGAAAAATGTTGAGAGATACCGAACTCAAAGCATATAGCTTGATAGTCGAAACTGTGAAA CGATGTAACTTTTAGTTGTATTGGTGACAACAATGGTGGTTCGGGGTATAACCTCTTCCA CTGGTTCAACAATTGTGCCCCGATCGATCGTCCAGGTGAAATCATGAACATGAGTTCCAT ATGCCTTCGTTGATTCTTGGACATGTCCATCGACACCAAGTGTGTTTGGAACGGAACAAA CTCTT