Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g009750.3.1
CDS Infomation

importin alpha
Sequence

ATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTC
GATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAA
AGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCT
AGCACTGCTGCTGTTTCTCACCTTGATAAGAAGCTGGAGACTCTTCCTGAATTGATTGCT
GGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTG
CTTTCAATTGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGC
TTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGTTTGAGGCAGCGTGGGCT
CTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCT
GTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGCCGTT
TGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCAT
GGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGA
AATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG
ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTG
ACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCT
GTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACTTAGTCATTCTTCACCA
TCTGTTCTCATTCCTGCCTTGCGCACTGTTGGTAACATAGTCACAGGAGACGATATCCAA
ACTCAGGTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAAT
TACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAAT
AGAAATCAAATTCAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTA
CAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCC
GGTGGAAATCATGATCAAATCAAGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGT
GATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAAT
ATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTAT
GCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGAC
AACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAA
GATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTT
CCATCGGGAGGATTTAACTTCAGTTGA

Peptide Sequence

PEP ID

Solyc06g009750.3.1
PEP Infomation

importin alpha
Sequence

MSLRPNSRTEARRSRYKVAVDAEEGRRRREDNMVEIRKNKREENLLKKRREGLLQAQQFP
STAAVSHLDKKLETLPELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPR
FVEFLARDDYPQLQFEAAWALTNIASGTSENTKVVIDYGSVPIFIRLLSSPSDDVREQAV
WALGNIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNFCRGKPQPLFEQ
TKAALPTLGRLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCSRLVELLLSHSSP
SVLIPALRTVGNIVTGDDIQTQVMIDHHALPCLVNLLTQNYKKSIKKEACWTISNITAGN
RNQIQIVIEAGIIAPLVYLLQNAEFEIKKEAAWAISNATSGGNHDQIKFLVSQGCIKPLC
DLLVCPDPRIVTVCLEGLENILKIGEADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHD
NTEIYEKAVKILETYWLEEEDVPVSLNEDQFEFGGADISLPSGGFNFS*

Transcript Sequence

Transcript ID

Solyc06g009750.3.1
Transcript Infomation

importin alpha
Sequence

AATAATAAAGGCTACTTTCCAAAATCAGAACGGTGGTTGAAACAAAACTTTTTTTTTTCT
TTTTAGAAACAATCCAAATTTTCCCCAAACCCTGATTCCACTCTCAATTGTCTTCTTCCT
CATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTT
CATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCAC
TGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGG
AGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAG
AGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTG
CTGCTGTTTCTCACCTTGATAAGAAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTT
GGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAA
TTGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTG
AATTTCTTGCTCGAGATGACTATCCTCAACTGCAGTTTGAGGCAGCGTGGGCTCTTACAA
ATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAA
TTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGCCGTTTGGGCTT
TGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTT
TAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTA
CCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAGACAAAAG
CGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATG
CATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTG
AAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACTTAGTCATTCTTCACCATCTGTTC
TCATTCCTGCCTTGCGCACTGTTGGTAACATAGTCACAGGAGACGATATCCAAACTCAGG
TTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAA
AAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATC
AAATTCAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATG
CTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAA
ATCATGATCAAATCAAGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTC
TGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGA
AGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGT
TAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTG
AAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGC
CGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGG
GAGGATTTAACTTCAGTTGATGGGGTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGG
AGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGG
ATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTC
CCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAG
TCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCCATCTTTTT
GTACCCTTATATGGCTTGTTTCCATCTCTGTACCCTCATTTGGCATTATCATAGTAGTTG
CTTTCTGACTTAAGAAGAGATACTTCATTTACAAGAATGAGGTGCTGAAATTACTATCAA
TA