Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g009530.3.1
CDS Infomation	Carbohydrate-binding-like fold protein (AHRD V3.3 *** A0A097PPL4_SOLLC)
Sequence	ATGGCATCCAGCTACTTCTATGTATGCACAATCATATCAATTATTCTCTACGTTTCCGCC ACTGCCGCTGCTGATTCAATTCAAGGATGTGGGGGGTTTGTTGAGGCAAGTTCGGAACTG ATCAAGTCAAGGAAGTCAAGCGATCCGAAATTGGATTATTCTAATATCATTGTTGAGCTT CGCACATTGGATGGCTTGGTGAAGGAAAGAACACACTGTGCCCCTAATGGTTATTACTTC ATTCCAGTGTATGATAAGGGTTCTTTCTTGATCAAAGTCAATGGACCAGAGGGGTGGTCA TGGGATCCTGAACAAGTACCTGTTTCAATTGATCATACTGGCTGCAATGGCAATGAAGAT ATAAATTTTCGCTTCACCGGGTTCACTGTATCTGGACGAATTGTGGGAAATGATGGTGGG GAAAGCTGTGCTCTGAAAGATGGAGGTCCATCAAATGTGAAAGTTGAGTTATTGTCTCCC ACAGGTGGTGTTGTGTCCTCTGCATTATCAACACCCAGAGGAACATACTCCTTCTCAAAC GCTATACCCGGGAAGTACAAATTACGTGCATCACGTCATGACTTGAATGTTCAAGTTAGA GGATCGGCCGAGATTGATTTGGGTTTCGAAAATAGAATATTGGAGGACTTCTTCTTTGTA TCTGGTTATGATATTCGTGGATCTGTGGTTGCTCAGGGAAATCCCATACTGGGAGTTCAT ATCTATTTATACTCAGATGATGTCACAAAGGTTGATTGCCCTAAGGGCTCCAAAAATTCA CCTGGTGATCTAGGATTGGGAGAAGCACTTTGCCACAATGTGACAGATGCTAATGGAATC TTCTCGTTGAAATCCATTCCTTGTGGGGTTTACAAGCTTATACCTTTCTACAAGGGTGAA AACACCGTTTTTGATGTTTCACCTTCTTCAATGTCGATATCGGTTCAGCATGACCATGTA ATAGTGCCGGAAAAGTTTCAGGTCACTGGATTTTCTGTTGGGGGTCGTGTGGTTGATGGA GATGGTAACGGCATTGAGGGTGTCGAAATTTTAGTTGATGGACAAAAAAAATCTATCACT GATAAAGAAGGATATTATAAGCTTGACCAGGTCACGTCTAAACGATACACAATAGAAGCA AAGAAAGTGCACTACAGATTTGACAGGCTCATTGACTTTTTGGTATTGCCTAATATGGCT TCTATATCTGACATCAAAGCTGCATCATATGATGTATGTGGTGTTGCACAAACAGTTAAT TCTGAATTCAAAGCCAAGGTAGCTCTGACTCATGGCCCACAAAACGTCAAACCTCAAGTG AAACTTACTGATGAGAGTGGCCATTTTTGCTTTGAGGTTCCTCCTGGTGATTATCGCTTA TCTGCAATCCCAGCAAAACTTGAGAACGCTAAAGAACTTCTATTTTCTCCTTCTCATATT GATGTTTCAGTCAGGAGTCCGATATTGGATGTCAAGTTCTATCAGGCACAAGTAAGTATA CATGGCTCCGTTGTTTGTAAGGAGAAATGTGGTTCTTCAGTTTCTTTGACTCTTCTGCGC CTGGATGGGAGAAATAAAGACGATAAGAAGACAATTGGTTTGGCAAATGAGAGTAATGAA TTTTTCTTCTCAAATGTTCTCCCTGGTAAATACAGGGTTGAGGTAAAAAACAATTATCCA ATAGCATCATCAGGACAAGATAAATGGTGCTGGGAGCAGAGTTTTATTGATTTAGAAGTT GGCGCTGAGGATGTTAAAGGGGTAGATTTTGTTCAAAAAGGTTTCTGGGTCAACATAGTC TCAAGCCATGATGTGGAGGGCTTACTGACTCAATCAGATGGTTCTGGAATGAACTTGAAC ATCAAGAAGGGTTCTCAACACGTGTGCGTAGAATCTCCGGGAGTGCATGAGCTGAGCTTT CCAAATTCATGTATTTCTTTTGGGAGTTCATCTGTGATCATTGACACATCTAACCTTTCT CCTATCTATTTGAAAGGCGAGAGCTATCTTTTGAAGGGTCATGTCCATGTTGAATCAAGC TCGTTTAGTAGCGTTGAGGGCTTGCCTGAGAATATACCGTTGGACATTTTGGACAGTGAA GGTTCTGTTGTTGATGGTCTATTGGCAAGACGTGTGCCTTACGGAGTTGATCAATCGAGT GCAGCCATCTACGAATTTTCCATGTGGGCTAGTCCGGGAGGAAAATTTACTTTTATTCCT CGAGATGCACGGGATGATGGCGGGAAAAAAATATTATTTTATCCCACACAGCAGCATGTT GCTGTGATGGAAGATGGCTGCCAATCTTCAATTCCTCCTTTTGCTGGTCGACTTGGGATG TATATAGAAGGATCAGTTTCTCCCCCTCTCAATGATGTTGTTGTCAAAATAATTGCTACA GGAGACAGCCAAAGTGCTCCACTTAAGCAAGGCGATTTAGCACTTCAAACTACCACAGGG ACCGATGGCTTATATGTCGCAGGGCCTCTATATGATGATATAAGTTATACTGTTGAAGCT TCAAAGCCGGGTTACCATGTAAAGCAAGCTGGACCTCATTCCTTTTCTTGTCAGAAGCTG GGCCAAATTTCAGTGCGTATATATTCTAGAGAAGACGCCAACGAGCCTTTTCCATCAGTT CTCTTATCATTAAGTGGAGAAGATGGTTACAGGAACAATACAGTATCAGGTGTTGGTGGG ATTTTTGTATTTGGGGACTTATTTCCAGGGAGTTTCTATCTCCGACCCTTGCTTAAGGAA TATGCTTTCTCCCCTCCAGCAGAGGCAATCGAACTTGGCTCTGGAGAGTCAAAGGAAGTC GTCTTTCATGCAACGCGTGTTGCATACAGTGCCATGGGAGTAGTTAAACTCTTGTCTGGT CAGCCAAAAGAAGGTGTTTCAGTAGAAGCTCGATCCGAGTCAAAAGGCTTGTATGAGGAG ACAGTAACAGATTCAACAGGATTTTACCGTTTGAGAGGACTCCTACCCGATACTACTTAT GTGATTAAAGTAGCAAGGAAAGTTGCATCTGGTGGAGCTATGATTGAGCGTGCATCTCCT GAGTTTCTGACCGTTCAGGTGAACGCTGAGGACTCTAGGGGATTAGATTTTGTAGTATTT GAACAGCCAGAGAGGACAATTATAAGTGGCCATGTTGAAGGGCATAAAATCAAAGAGTTC AACTCACATCTCCATGTGGAGATCAAGTCTGCTGCTGATCCGTCAAAGATTGAGTACAAC TCTCCACTTCCCCTCTCAAACTTTTTCCAGGTGAAGGACTTGCCTAAGGGTAAATACCTT GTACAGCTGAGATCATCTCTGCCTTCAAGGACTCACAAATTTGAATCAGATGTTATTGAG GTTGATTTAGAGAAAAATTCTCAAATTCATGTGGGTCCACTCAAGTACAAAATCGATTTC AATCACCAGAAACAGGATTTAACTCCAGCTCCTGTGTACCCTCTATTTGTTGGAGTTTCT GTGATTGCACTTTTCATTGGGATGCCAAGATTGAAGGATTTATACCAAGTGATGATGGGA ATGTCTTCATCAGTAGTGTCAGCAAAGAAAGAAGTGAAAAGACCTCTAGTGAGAAAGAAA ACATACTGA

Peptide Sequence

PEP ID	Solyc06g009530.3.1
PEP Infomation	Carbohydrate-binding-like fold protein (AHRD V3.3 *** A0A097PPL4_SOLLC)
Sequence	MASSYFYVCTIISIILYVSATAAADSIQGCGGFVEASSELIKSRKSSDPKLDYSNIIVEL RTLDGLVKERTHCAPNGYYFIPVYDKGSFLIKVNGPEGWSWDPEQVPVSIDHTGCNGNED INFRFTGFTVSGRIVGNDGGESCALKDGGPSNVKVELLSPTGGVVSSALSTPRGTYSFSN AIPGKYKLRASRHDLNVQVRGSAEIDLGFENRILEDFFFVSGYDIRGSVVAQGNPILGVH IYLYSDDVTKVDCPKGSKNSPGDLGLGEALCHNVTDANGIFSLKSIPCGVYKLIPFYKGE NTVFDVSPSSMSISVQHDHVIVPEKFQVTGFSVGGRVVDGDGNGIEGVEILVDGQKKSIT DKEGYYKLDQVTSKRYTIEAKKVHYRFDRLIDFLVLPNMASISDIKAASYDVCGVAQTVN SEFKAKVALTHGPQNVKPQVKLTDESGHFCFEVPPGDYRLSAIPAKLENAKELLFSPSHI DVSVRSPILDVKFYQAQVSIHGSVVCKEKCGSSVSLTLLRLDGRNKDDKKTIGLANESNE FFFSNVLPGKYRVEVKNNYPIASSGQDKWCWEQSFIDLEVGAEDVKGVDFVQKGFWVNIV SSHDVEGLLTQSDGSGMNLNIKKGSQHVCVESPGVHELSFPNSCISFGSSSVIIDTSNLS PIYLKGESYLLKGHVHVESSSFSSVEGLPENIPLDILDSEGSVVDGLLARRVPYGVDQSS AAIYEFSMWASPGGKFTFIPRDARDDGGKKILFYPTQQHVAVMEDGCQSSIPPFAGRLGM YIEGSVSPPLNDVVVKIIATGDSQSAPLKQGDLALQTTTGTDGLYVAGPLYDDISYTVEA SKPGYHVKQAGPHSFSCQKLGQISVRIYSREDANEPFPSVLLSLSGEDGYRNNTVSGVGG IFVFGDLFPGSFYLRPLLKEYAFSPPAEAIELGSGESKEVVFHATRVAYSAMGVVKLLSG QPKEGVSVEARSESKGLYEETVTDSTGFYRLRGLLPDTTYVIKVARKVASGGAMIERASP EFLTVQVNAEDSRGLDFVVFEQPERTIISGHVEGHKIKEFNSHLHVEIKSAADPSKIEYN SPLPLSNFFQVKDLPKGKYLVQLRSSLPSRTHKFESDVIEVDLEKNSQIHVGPLKYKIDF NHQKQDLTPAPVYPLFVGVSVIALFIGMPRLKDLYQVMMGMSSSVVSAKKEVKRPLVRKK TY*

Transcript Sequence

Transcript ID	Solyc06g009530.3.1
Transcript Infomation	Carbohydrate-binding-like fold protein (AHRD V3.3 *** A0A097PPL4_SOLLC)
Sequence	AAAATAGTAGATGACTCAAGCCTAATAAAACTAGTATTATTACATACCATCTAAATTTTT TTGATGGATATCTTTATTTAACACTCAAATTTAGGCTTAGATCAAAGTCTCTCAATAACA AAAAATACTTTATAGTATAAAATATTGGTCCTTTGTGTCCCTACTGTAAGGTCTAATGTA CAATAGTCAAAACCCTTGCGCATCACAGCAGAGAGAACCAACCCCTGAAGCTCAACTGAG CAGCGCGAGATCTGTTTGTGCTAATCACTAAGGGACGTCAATACTCTCTCTTGCCGGCAA TGGCATCCAGCTACTTCTATGTATGCACAATCATATCAATTATTCTCTACGTTTCCGCCA CTGCCGCTGCTGATTCAATTCAAGGATGTGGGGGGTTTGTTGAGGCAAGTTCGGAACTGA TCAAGTCAAGGAAGTCAAGCGATCCGAAATTGGATTATTCTAATATCATTGTTGAGCTTC GCACATTGGATGGCTTGGTGAAGGAAAGAACACACTGTGCCCCTAATGGTTATTACTTCA TTCCAGTGTATGATAAGGGTTCTTTCTTGATCAAAGTCAATGGACCAGAGGGGTGGTCAT GGGATCCTGAACAAGTACCTGTTTCAATTGATCATACTGGCTGCAATGGCAATGAAGATA TAAATTTTCGCTTCACCGGGTTCACTGTATCTGGACGAATTGTGGGAAATGATGGTGGGG AAAGCTGTGCTCTGAAAGATGGAGGTCCATCAAATGTGAAAGTTGAGTTATTGTCTCCCA CAGGTGGTGTTGTGTCCTCTGCATTATCAACACCCAGAGGAACATACTCCTTCTCAAACG CTATACCCGGGAAGTACAAATTACGTGCATCACGTCATGACTTGAATGTTCAAGTTAGAG GATCGGCCGAGATTGATTTGGGTTTCGAAAATAGAATATTGGAGGACTTCTTCTTTGTAT CTGGTTATGATATTCGTGGATCTGTGGTTGCTCAGGGAAATCCCATACTGGGAGTTCATA TCTATTTATACTCAGATGATGTCACAAAGGTTGATTGCCCTAAGGGCTCCAAAAATTCAC CTGGTGATCTAGGATTGGGAGAAGCACTTTGCCACAATGTGACAGATGCTAATGGAATCT TCTCGTTGAAATCCATTCCTTGTGGGGTTTACAAGCTTATACCTTTCTACAAGGGTGAAA ACACCGTTTTTGATGTTTCACCTTCTTCAATGTCGATATCGGTTCAGCATGACCATGTAA TAGTGCCGGAAAAGTTTCAGGTCACTGGATTTTCTGTTGGGGGTCGTGTGGTTGATGGAG ATGGTAACGGCATTGAGGGTGTCGAAATTTTAGTTGATGGACAAAAAAAATCTATCACTG ATAAAGAAGGATATTATAAGCTTGACCAGGTCACGTCTAAACGATACACAATAGAAGCAA AGAAAGTGCACTACAGATTTGACAGGCTCATTGACTTTTTGGTATTGCCTAATATGGCTT CTATATCTGACATCAAAGCTGCATCATATGATGTATGTGGTGTTGCACAAACAGTTAATT CTGAATTCAAAGCCAAGGTAGCTCTGACTCATGGCCCACAAAACGTCAAACCTCAAGTGA AACTTACTGATGAGAGTGGCCATTTTTGCTTTGAGGTTCCTCCTGGTGATTATCGCTTAT CTGCAATCCCAGCAAAACTTGAGAACGCTAAAGAACTTCTATTTTCTCCTTCTCATATTG ATGTTTCAGTCAGGAGTCCGATATTGGATGTCAAGTTCTATCAGGCACAAGTAAGTATAC ATGGCTCCGTTGTTTGTAAGGAGAAATGTGGTTCTTCAGTTTCTTTGACTCTTCTGCGCC TGGATGGGAGAAATAAAGACGATAAGAAGACAATTGGTTTGGCAAATGAGAGTAATGAAT TTTTCTTCTCAAATGTTCTCCCTGGTAAATACAGGGTTGAGGTAAAAAACAATTATCCAA TAGCATCATCAGGACAAGATAAATGGTGCTGGGAGCAGAGTTTTATTGATTTAGAAGTTG GCGCTGAGGATGTTAAAGGGGTAGATTTTGTTCAAAAAGGTTTCTGGGTCAACATAGTCT CAAGCCATGATGTGGAGGGCTTACTGACTCAATCAGATGGTTCTGGAATGAACTTGAACA TCAAGAAGGGTTCTCAACACGTGTGCGTAGAATCTCCGGGAGTGCATGAGCTGAGCTTTC CAAATTCATGTATTTCTTTTGGGAGTTCATCTGTGATCATTGACACATCTAACCTTTCTC CTATCTATTTGAAAGGCGAGAGCTATCTTTTGAAGGGTCATGTCCATGTTGAATCAAGCT CGTTTAGTAGCGTTGAGGGCTTGCCTGAGAATATACCGTTGGACATTTTGGACAGTGAAG GTTCTGTTGTTGATGGTCTATTGGCAAGACGTGTGCCTTACGGAGTTGATCAATCGAGTG CAGCCATCTACGAATTTTCCATGTGGGCTAGTCCGGGAGGAAAATTTACTTTTATTCCTC GAGATGCACGGGATGATGGCGGGAAAAAAATATTATTTTATCCCACACAGCAGCATGTTG CTGTGATGGAAGATGGCTGCCAATCTTCAATTCCTCCTTTTGCTGGTCGACTTGGGATGT ATATAGAAGGATCAGTTTCTCCCCCTCTCAATGATGTTGTTGTCAAAATAATTGCTACAG GAGACAGCCAAAGTGCTCCACTTAAGCAAGGCGATTTAGCACTTCAAACTACCACAGGGA CCGATGGCTTATATGTCGCAGGGCCTCTATATGATGATATAAGTTATACTGTTGAAGCTT CAAAGCCGGGTTACCATGTAAAGCAAGCTGGACCTCATTCCTTTTCTTGTCAGAAGCTGG GCCAAATTTCAGTGCGTATATATTCTAGAGAAGACGCCAACGAGCCTTTTCCATCAGTTC TCTTATCATTAAGTGGAGAAGATGGTTACAGGAACAATACAGTATCAGGTGTTGGTGGGA TTTTTGTATTTGGGGACTTATTTCCAGGGAGTTTCTATCTCCGACCCTTGCTTAAGGAAT ATGCTTTCTCCCCTCCAGCAGAGGCAATCGAACTTGGCTCTGGAGAGTCAAAGGAAGTCG TCTTTCATGCAACGCGTGTTGCATACAGTGCCATGGGAGTAGTTAAACTCTTGTCTGGTC AGCCAAAAGAAGGTGTTTCAGTAGAAGCTCGATCCGAGTCAAAAGGCTTGTATGAGGAGA CAGTAACAGATTCAACAGGATTTTACCGTTTGAGAGGACTCCTACCCGATACTACTTATG TGATTAAAGTAGCAAGGAAAGTTGCATCTGGTGGAGCTATGATTGAGCGTGCATCTCCTG AGTTTCTGACCGTTCAGGTGAACGCTGAGGACTCTAGGGGATTAGATTTTGTAGTATTTG AACAGCCAGAGAGGACAATTATAAGTGGCCATGTTGAAGGGCATAAAATCAAAGAGTTCA ACTCACATCTCCATGTGGAGATCAAGTCTGCTGCTGATCCGTCAAAGATTGAGTACAACT CTCCACTTCCCCTCTCAAACTTTTTCCAGGTGAAGGACTTGCCTAAGGGTAAATACCTTG TACAGCTGAGATCATCTCTGCCTTCAAGGACTCACAAATTTGAATCAGATGTTATTGAGG TTGATTTAGAGAAAAATTCTCAAATTCATGTGGGTCCACTCAAGTACAAAATCGATTTCA ATCACCAGAAACAGGATTTAACTCCAGCTCCTGTGTACCCTCTATTTGTTGGAGTTTCTG TGATTGCACTTTTCATTGGGATGCCAAGATTGAAGGATTTATACCAAGTGATGATGGGAA TGTCTTCATCAGTAGTGTCAGCAAAGAAAGAAGTGAAAAGACCTCTAGTGAGAAAGAAAA CATACTGAGGAATGGATCTACTTTTTAGAGGAGCTTCAATGCTTACTTAGGTAGGTGACA TGAATGATCTATAAGAGCTGATGTAGTTTTTATTTGTCCATCGATTCAAGCAAATCTTCA CTCACACAAGGATCTCCTCCCTCGCCTCACAGCAACCCTCTACTACGATACTGAATCTTC ATTTGTTAGTCGTTAGCGCTTCAAATTTTGACAATTTTAACCTCAATATATTTATTATAC CTATGCCAATTTTTGGGATGGTTTCAGTAAATTATGTTTTTGTGATTCCATCCATATTTA GCTTTTGTAACTACTGCCCAGCCCCTCTCTCTTTAGTATTTTGTTGGGATATTAATGATA TCTATAAAGATTTATGTTAATTATCTGATAACTTGTACAGAGTGTTGAAATGATACTAAA AAATAAAAATGGGGATATGTTCCATTTGCTTTAGAACTAAATCCCAACAGTACATACTTT TCTAAATAATT