Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g008940.3.1
CDS Infomation

Elongation factor Tu (AHRD V3.3 *** K4C3S4_SOLLC)
Sequence

ATGGCGTCAATTGCTTTTAGAAGCTCAAATTCAAAGCGATTGCTTGCAGTTTCACCTCAA
TTATACTCTTCATGCTGTAGAGGATCGGTGCCAGCTCAATTCTCACTCTCCGAAACCATA
AATGCAAATGAAGCTCCTGCATTTTGTAACCATCCATGGTGGAGATCCATGGCTACCTTC
ACTCGAACAAAACCTCATGTTAACGTGGGAACTATCGGCCATGTTGATCATGGAAAGACT
ACTCTCACAGCTGCAATTACAAAGGTAAGGTTGGTTCTAGCAGAAGAAGGAAAAGCAAAG
GCTGTTGCTTTTGATGAAATCGATAAAGCCCCTGAAGAGAAAAAGAGAGGAATTACTATC
GCTACGGCCCATGTGGAGTATGAGACTGCTAAAAGACACTATGCTCATGTTGATTGCCCT
GGGCACGCAGATTATGTTAAAAATATGATTACTGGAGCTGCCCAAATGGATGGTGGTATT
CTAGTCGTATCTGCCCCTGATGGACCCATGCCACAAACAAAGGAGCATATTCTGCTTGCA
CGCCAGGTGGATATGTGTCAGTTTGTGGATAGACTAGTAAACTACCTGAAAGCTTTATGT
TGTGATTCTAATTTTACCTGTGCCTACATTTTACAGGTAGGTGTACCATCACTTGTGTGC
TTTCTGAACAAGGTTGATGCTGTTGATGATCCAGAACTCCTGGAACTTGTTGAAATGGAA
CTCCGAGAGCTGCTTAGTTTCTACAAATTTCCTGGGGATGACATCCCTATCGTTCGTGGT
TCAGCTCTTTCTGCATTACAGAGTACAAATGAAGAAATTGGGAAAAAAGCTATTCTGAAG
TTGATGGAGGCTGTAGATGAATATATCCCTGATCCAGTGCGTCAGCTTGATAAACCATTC
CTAATGCCAATAGAAGATGTATTTTCAATTCAGGGACGTGGAACTGTTGCTACTGGGCGT
GTTGAACAAGGAACCATAAAAGTTGGAGAAGATGTGGAGATTTTAGGACTGATGCAGGGC
ACTTTAAAATCTACAGTTACTGGTGTTGAAATGTTCAAGAAGATCTTGGATCATGGACAA
GCTGGTGATAATGTTGGCCTTCTTCTTCGTGGCTTGAAACGAGATGACATTACGCGAGGA
ATGGTGATTGCAAAGCCTGGAAGTGTGAAAACATGCAAGAAATTTGAAGCAGAGATATAT
GTACTTACAAAGGATGAAGGTGGTCGTCACACTGCCTTCTTCTCAAATTATATGCCTCAA
TTTTACATGAGGACTGCTGACATCACTGGCAAAGTGGAGTTGCCTGAAAATGTCAAGATG
GTTATGCCTGGGGATAATGTTACTGCTACTTTTGAGCTGATGTCTCCGGTTCCCCTTGAT
GCAGGACAAAGATTTGCTTTGCGAGAAGGTGGTAGAACAGTTGGCGCGGGCGTTGTTTCA
AAAAGTTGCAATTTGAAAGTGAACATCCATTGTGAATCCTGCAAAATGAAGATGATGGAA
GTGTTGCACTCCGTACGAGGAGTGTATGCATTGACAATAGATGCAGAAAAAGGAATAGCA
AATGTTTGTGGAGAGGTGGATCCAAATAGGTTGTTATTAGCATTGTTAAAGTCAGGTCAA
CATGCAGAATTAATAAATGTGAAATTGAAGCATCCTTCTATTGTTAATACTCCAAGAAAT
CAACATGGACACTATAATGTTGGCCATGGTTATAACAATAACTCTAATTCACTAGATGGA
CCTTATGGCTACAATCATGCATTGAATGAGCCAACTTCTTACTATCCTACTAGAGGAGGA
GCCATGTTTGATCAACCTTATTATGGTTCAACCTACTACAACTCTTCTCCTTGTGTTGGC
TACGAGTCGAATCGATCTCTAACGATGGATCATGTCATCAAAGAAGAACCTATGAATTGG
TGTAGTATAATGTAG

Peptide Sequence

PEP ID

Solyc06g008940.3.1
PEP Infomation

Elongation factor Tu (AHRD V3.3 *** K4C3S4_SOLLC)
Sequence

MASIAFRSSNSKRLLAVSPQLYSSCCRGSVPAQFSLSETINANEAPAFCNHPWWRSMATF
TRTKPHVNVGTIGHVDHGKTTLTAAITKVRLVLAEEGKAKAVAFDEIDKAPEEKKRGITI
ATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLA
RQVDMCQFVDRLVNYLKALCCDSNFTCAYILQVGVPSLVCFLNKVDAVDDPELLELVEME
LRELLSFYKFPGDDIPIVRGSALSALQSTNEEIGKKAILKLMEAVDEYIPDPVRQLDKPF
LMPIEDVFSIQGRGTVATGRVEQGTIKVGEDVEILGLMQGTLKSTVTGVEMFKKILDHGQ
AGDNVGLLLRGLKRDDITRGMVIAKPGSVKTCKKFEAEIYVLTKDEGGRHTAFFSNYMPQ
FYMRTADITGKVELPENVKMVMPGDNVTATFELMSPVPLDAGQRFALREGGRTVGAGVVS
KSCNLKVNIHCESCKMKMMEVLHSVRGVYALTIDAEKGIANVCGEVDPNRLLLALLKSGQ
HAELINVKLKHPSIVNTPRNQHGHYNVGHGYNNNSNSLDGPYGYNHALNEPTSYYPTRGG
AMFDQPYYGSTYYNSSPCVGYESNRSLTMDHVIKEEPMNWCSIM*

Transcript Sequence

Transcript ID

Solyc06g008940.3.1
Transcript Infomation

Elongation factor Tu (AHRD V3.3 *** K4C3S4_SOLLC)
Sequence

GAATACAACCAAATTCAGATCTAATTACATACGTCGAATCATTCAAATCTTATTGTAGAG
GTTCGACGAAACGGCTAAATCCGACCCGTAATATCCATTTGAGAAGTCACCTAATCCAGT
ACGTCGTCGTTTTCCTCTCGCTTAAACCCTAAACCCTTGTAAAATCCGAAACATTTCCAC
TACCCATTTTTTCATTTTTTTTCTCAGCTCTGCGTCTTCTTCAATGGCGTCAATTGCTTT
TAGAAGCTCAAATTCAAAGCGATTGCTTGCAGTTTCACCTCAATTATACTCTTCATGCTG
TAGAGGATCGGTGCCAGCTCAATTCTCACTCTCCGAAACCATAAATGCAAATGAAGCTCC
TGCATTTTGTAACCATCCATGGTGGAGATCCATGGCTACCTTCACTCGAACAAAACCTCA
TGTTAACGTGGGAACTATCGGCCATGTTGATCATGGAAAGACTACTCTCACAGCTGCAAT
TACAAAGGTAAGGTTGGTTCTAGCAGAAGAAGGAAAAGCAAAGGCTGTTGCTTTTGATGA
AATCGATAAAGCCCCTGAAGAGAAAAAGAGAGGAATTACTATCGCTACGGCCCATGTGGA
GTATGAGACTGCTAAAAGACACTATGCTCATGTTGATTGCCCTGGGCACGCAGATTATGT
TAAAAATATGATTACTGGAGCTGCCCAAATGGATGGTGGTATTCTAGTCGTATCTGCCCC
TGATGGACCCATGCCACAAACAAAGGAGCATATTCTGCTTGCACGCCAGGTGGATATGTG
TCAGTTTGTGGATAGACTAGTAAACTACCTGAAAGCTTTATGTTGTGATTCTAATTTTAC
CTGTGCCTACATTTTACAGGTAGGTGTACCATCACTTGTGTGCTTTCTGAACAAGGTTGA
TGCTGTTGATGATCCAGAACTCCTGGAACTTGTTGAAATGGAACTCCGAGAGCTGCTTAG
TTTCTACAAATTTCCTGGGGATGACATCCCTATCGTTCGTGGTTCAGCTCTTTCTGCATT
ACAGAGTACAAATGAAGAAATTGGGAAAAAAGCTATTCTGAAGTTGATGGAGGCTGTAGA
TGAATATATCCCTGATCCAGTGCGTCAGCTTGATAAACCATTCCTAATGCCAATAGAAGA
TGTATTTTCAATTCAGGGACGTGGAACTGTTGCTACTGGGCGTGTTGAACAAGGAACCAT
AAAAGTTGGAGAAGATGTGGAGATTTTAGGACTGATGCAGGGCACTTTAAAATCTACAGT
TACTGGTGTTGAAATGTTCAAGAAGATCTTGGATCATGGACAAGCTGGTGATAATGTTGG
CCTTCTTCTTCGTGGCTTGAAACGAGATGACATTACGCGAGGAATGGTGATTGCAAAGCC
TGGAAGTGTGAAAACATGCAAGAAATTTGAAGCAGAGATATATGTACTTACAAAGGATGA
AGGTGGTCGTCACACTGCCTTCTTCTCAAATTATATGCCTCAATTTTACATGAGGACTGC
TGACATCACTGGCAAAGTGGAGTTGCCTGAAAATGTCAAGATGGTTATGCCTGGGGATAA
TGTTACTGCTACTTTTGAGCTGATGTCTCCGGTTCCCCTTGATGCAGGACAAAGATTTGC
TTTGCGAGAAGGTGGTAGAACAGTTGGCGCGGGCGTTGTTTCAAAAAGTTGCAATTTGAA
AGTGAACATCCATTGTGAATCCTGCAAAATGAAGATGATGGAAGTGTTGCACTCCGTACG
AGGAGTGTATGCATTGACAATAGATGCAGAAAAAGGAATAGCAAATGTTTGTGGAGAGGT
GGATCCAAATAGGTTGTTATTAGCATTGTTAAAGTCAGGTCAACATGCAGAATTAATAAA
TGTGAAATTGAAGCATCCTTCTATTGTTAATACTCCAAGAAATCAACATGGACACTATAA
TGTTGGCCATGGTTATAACAATAACTCTAATTCACTAGATGGACCTTATGGCTACAATCA
TGCATTGAATGAGCCAACTTCTTACTATCCTACTAGAGGAGGAGCCATGTTTGATCAACC
TTATTATGGTTCAACCTACTACAACTCTTCTCCTTGTGTTGGCTACGAGTCGAATCGATC
TCTAACGATGGATCATGTCATCAAAGAAGAACCTATGAATTGGTGTAGTATAATGTAGAT
GTGAGAGTTTATAGTATTGGACTTGTCTAACTTTTAAAATGACAAGAGTTCAAAATCTAT
TGTTGGTTGAAATTTTAAGTATTGAACTCATTGTATATAATGCCAATAACATAAAGTGAA
TCTTCCATTTTGTATTTTTTATAG